Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13704
- Subject:
- XR_002956439.1
- Aligned Length:
- 3220
- Identities:
- 221
- Gaps:
- 2985
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 518
Query 1 ----------------------------------ATG--CAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 38
||| .||||||||||||||||||||||||||||||||||
Sbjct 519 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 592
Query 39 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 666
Query 113 TGGTTTCCATGATCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCT---- 182
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAA 740
Query 183 ----------------------TAAGAAC-----ATGGAAG------------------GGGTGCTGATGGACG 211
||||||| .|||||| .|||||..| |
Sbjct 741 CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCA-----G 809
Query 212 TGGAC--TGTGAGAGCGTCTAC---CC--CATTGTG-------------------------------------- 240
.|||| |.|...|||.|||.| || |.|||||
Sbjct 810 AGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGAATCGGCTCCCAGACACCTGCCACTCGTG 883
Query 241 -------------------------------------------------------------------------- 240
Sbjct 884 AATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGATGGGGTTTCACTATGTTGCCCCGGCT 957
Query 241 -------------------------------------------------------------------------- 240
Sbjct 958 GGTCTAAAATTCCTGGCCTCAAGCGATCCTCCTGCCTCCGCCTTCCGAAGTGCTGGGATTATAGGCTTGAGTCA 1031
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1032 CCACCGTGCCCAGCATACATCTGCTTTCTGAATATTTGAGAGGCGGAAGGCACAAGGCGTGACAATTGATGGGA 1105
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1106 TTTGGGATGTAAAGAGCAAGAGAGGACTCAAGCACAGTCGCCTCGAGGTTTCTAGCCCCGGCTGCTGTCACCAA 1179
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1180 CCACTCTCAGGAAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCAT 1253
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1254 CAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGC 1327
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1328 ATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCG 1401
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1402 GCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCC 1475
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1476 CTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGC 1549
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1550 TGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGC 1623
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1624 ATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAG 1697
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1698 CTCTGGAACTACAGAGGTCGCACGGTGAGTTGCCAGGTGTGGCCCGTAATCGGAGCGCACAAAACATGATGGGA 1771
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1772 CACGTAACGGGACCACACAGGGCACATTGGGCACTTGCAGGGGCGCGAGGTGGCGGCACGTAATGGGAGCGCGC 1845
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1846 TGAGCATGATGGGGCATGTGCGGGAGCGCCAGGCGGGGCATGTAACCAGAGCGTGCGGGGCATGATGGGGCACG 1919
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1920 GACATGGGGGGTTAGGTGGGGCACGTAATTGGAGCTCGCGGGGCAGGATGGGGCATCTAACTGGAGCGACAGAG 1993
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1994 AGCACGATGGGGCACTTACAGGGGCCGGAGGCTGGGTACGTAATGAGAGCGAGCGGGAAATGATGGGGCACCTA 2067
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2068 ACGAGCACGCAGAGCATGATGGGGCACGGGTGCGAGGTGGGGCGCACAGTGGGAGCGCGTGGGGCATGATGGGA 2141
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2142 CACATGGCGAGGCCGTCAGGGCACAGGGGAAGCACTTTTGGAACACGTGAGTGACAGGGCTGCCGCCCTTGAAG 2215
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2216 GAGCCCTCGGAGTGGCTGCGTGGTGGGGCACGTGGGGCAGGTTCAGGAAAAAGGATGCAGCATGTGATTGCAGG 2289
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2290 GCAACCTGGTGAGGACACGAGAGCCACCTGCCACCAGCAGGGTTCAGGGCTCCCAGCTGTGGGTTACTTCCACC 2363
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2364 TTCTTTCACTTTCCCTCTTCCATTGTATTCTAGAGAATTTAGGCCCAGACAAGACACTGATTGATTGATTGATT 2437
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2438 GATCGATTGACAGAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCACTGCAGCCGCCAC 2511
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2512 CTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCACCACCAGGCCCA 2585
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2586 GCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTGAACT 2659
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2660 CCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTT 2733
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2734 CAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATAT 2807
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2808 TATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGG 2881
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2882 AGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCT 2955
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2956 ACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGG 3029
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3030 AGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAA 3103
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3104 GAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACG 3177
Query 241 -------------------------------------- 240
Sbjct 3178 TTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 3215
