Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13704
- Subject:
- XR_002956443.1
- Aligned Length:
- 2650
- Identities:
- 239
- Gaps:
- 2410
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 ------------------------------------------------------------ATGCAGCACCGAGA 14
||||||||||||||
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGA 444
Query 15 AGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCT 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCT 518
Query 89 TCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTC 162
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 519 TCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTC 592
Query 163 AGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCAT 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGATTACTGATACTTATCCTTAAGAACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCAT 666
Query 237 TGTG---------------------------------------------------------------------- 240
||||
Sbjct 667 TGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGT 740
Query 241 -------------------------------------------------------------------------- 240
Sbjct 741 GCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTG 814
Query 241 -------------------------------------------------------------------------- 240
Sbjct 815 CTGTCCTTCTTTGTGGAGAGCAAGTCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGCAGTTCTCAGCTCACCG 888
Query 241 -------------------------------------------------------------------------- 240
Sbjct 889 AAACCTCTGCCTCCCGGGCTCAAGCAATTCTCATGTCTCAGCCTCCCAAGTAGCTGGGATTACGGGTGCACACC 962
Query 241 -------------------------------------------------------------------------- 240
Sbjct 963 ACCACACCTGGCTGATTTATGTATTTTTTTCGTAGAGACAGGGTTTTGCCATGTTGGCCGGGCTGGTCTCGAAC 1036
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1037 TCCTGACCTCGGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGTGCCCGG 1110
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1111 CCTTGACTACCATATTTTAAATTTACTGGAGGACTTTTTTGTTCTCTTCTTTTTTCTTTTTTTAATAGCATCCC 1184
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1185 GCTCTTATTTCAGAATAAAAAAAATTTTAAGGTATGTTGAGTAAGAATCTATAGAGCAATGAAAATGCAAGAGC 1258
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1259 AATAGCTATGGGCACCAAATGGTCAATCTTCTTATCATAATGTTGAGTGGAAGAAGCCAGGTCCACCAGACACA 1332
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1333 TGCTGCTCATTTATGCAAAGTTTGGACACAGGCAAAACAAAACTAGTTTGATCGTGATGGGAAACATTAGAGAA 1406
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1407 ATGCAAAGACATGACCATCATAATTGTCAGGAGAAGGCATTGGTTAGGATTGGGAAGCGGCAAGCAGAAGCATT 1480
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1481 TAGGGATTGGCTGGCAATGTTTTACTTCTCGGCTGAGTGAGGGTTGCATCGGTGTTTATTTGATAACACGTTCT 1554
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1555 AGGGGCTGGGCAAGATGGCTCATGTTTGTAGTCTCAGTACTTTGGGAGGCCAAAGATGGGAGGATTGCTTGAGC 1628
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1629 CCGTGAGTTTGAGACCAGCGTGGGTGACATAGCGAGACCCTGTCTCTACAAAAAATTAAAAAAAAAAAAAAAAA 1702
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1703 CCCAGCTGCGTGTGGTGGCACAGCCTCAAACTCCTGGGCTCAAGCGATCCTCCCTTCGCCTTCCAGCCACTCAG 1776
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1777 GAGGCTGGGGTGGGAGGATCGCTTGAACCCAGGAGTTTGAGGCTGCAGTGAGCTATGAATGAGCCACTGCACTC 1850
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1851 CAGCCTGGGCAACAGGGCAAGACCCTGTCTCAAAAAAAAAAAATTTAATTTGAACACTTCTGTTTTGTGCAGTT 1924
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1925 TTCTCTGTTATATTTTACTTTTTAAAAAGAAAAAGCGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACT 1998
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1999 TTGGGAGGCCAAGGTGGGCGGATCACCTGATGTCAGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCTCG 2072
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2073 TCTCTACTAAAAACACAAAAAATTAGCCGGGCGTGGTGGCGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGA 2146
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2147 GGCAGGAGAATCGCTTGAACCTAGGAGGCAGAGGTTGCAGTGAGCTGAGATTGCACCACTGCACCCCAGCCTGG 2220
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2221 GCAATAAGAGTGAAACTCCATCTCAAAAAAAAAAAAAAAAAAAGGTGCATGAAACATATGAAGCAAAAAGTGAA 2294
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2295 AGTCCCCATTCTTTTCCTTTTTCCAGAGGTGATTTTTGTGGCCAATCTGGTTTCATTCCCTCCCAGACACTTTT 2368
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2369 CTAGGCATCTATGCGCCTCTATTCACATATAAACAAAATAGGAGTTTTCCTGTGCTTCCCTTAAATGGCATATG 2442
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2443 TATCTTTCACTCTTTTTTTTCACCTAGTGGATCTTTAATACCTTAAAAGCTCAACCTGGGCTTGGTGCGGTGGC 2516
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2517 TCATACGTGTAATCCCAGGCCTTTGGGAGGCCAAGGTGGGAGGATCACTTGAGCTCAGGAGTTCCAGACCATTC 2590
Query 241 ------------------------------------------------------------ 240
Sbjct 2591 CAAAGCAAAAACAAAAGGATTTTGAGATCAGTGTGGGCAACTTAGCAAAACACCATCTCT 2650
