Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13704
- Subject:
- XR_002956446.1
- Aligned Length:
- 4046
- Identities:
- 227
- Gaps:
- 3809
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGACAAGAAGACAAGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCT 370
Query 1 -------------------------------ATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGA 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGA 444
Query 44 AAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTT 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTT 518
Query 118 TCCATGATCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCT--------- 182
|||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTT 592
Query 183 -----------------TAAGAAC-----ATGGAAG------------------GGGTG--CTGATGGAC---- 210
||||||| .|||||| .|||| |.|| ||||
Sbjct 593 CTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGA-GGACTTTC 665
Query 211 ---------GTGGACTGT-----------GAGAGC------------GTCTACCCCATTGTG------------ 240
.|| |||| |||||| ||||.|.|||...||
Sbjct 666 TTCCAGCTTCTG--CTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGG 737
Query 241 -------------------------------------------------------------------------- 240
Sbjct 738 GCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCT 811
Query 241 -------------------------------------------------------------------------- 240
Sbjct 812 CCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCT 885
Query 241 -------------------------------------------------------------------------- 240
Sbjct 886 TGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATTACA 959
Query 241 -------------------------------------------------------------------------- 240
Sbjct 960 GGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATGT 1033
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1034 TGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAG 1107
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1108 GCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAG 1181
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1182 CCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAA 1255
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1256 AAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGA 1329
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1330 TCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAA 1403
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1404 TTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCT 1477
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1478 GGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTC 1551
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1552 AAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACTA 1625
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1626 GATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCATT 1699
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1700 CCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGTG 1773
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1774 GGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTA 1847
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1848 GCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGG 1921
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1922 AAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTG 1995
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1996 CAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCA 2069
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2070 AGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGAA 2143
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2144 CTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTT 2217
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2218 CCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTG 2291
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2292 GCTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGATA 2365
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2366 CTTTATTTATTTATTTATCTATTTATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGG 2439
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2440 CTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGC 2513
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2514 CTCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATG 2587
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2588 GGGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAA 2661
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2662 GTACTGGGATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAG 2735
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2736 GCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCA 2809
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2810 TCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAG 2883
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2884 CATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCC 2957
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2958 GGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTC 3031
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3032 CCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCG 3105
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3106 CTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGG 3179
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3180 CATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGA 3253
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3254 GCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCAC 3327
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3328 TGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCA 3401
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3402 CCACCAGGCCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGC 3475
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3476 TGGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCT 3549
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3550 ACAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACC 3623
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3624 ACAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCC 3697
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3698 CAGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGA 3771
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3772 AACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGA 3845
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3846 GGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAG 3919
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3920 CCTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTG 3993
Query 241 -------------------------------------------------- 240
Sbjct 3994 AATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 4043
