Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13704
- Subject:
- XR_002956450.1
- Aligned Length:
- 3964
- Identities:
- 227
- Gaps:
- 3727
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCAGGTAAAGCCCTATCACCGGGTCTGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCCAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGCACGGCAGGAGCGGCGGCCCAGCACTTGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCAAAATATCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATG 296
Query 1 -----------------------ATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTG 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTG 370
Query 52 TACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGAT 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGAT 444
Query 126 CGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCT----------------- 182
|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAACTTTTCTACCCTG 518
Query 183 ---------TAAGAAC-----ATGGAAG------------------GGGTG--CTGATGGAC------------ 210
||||||| .|||||| .|||| |.|| ||||
Sbjct 519 AGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGA-GGACTTTCTTCCAGCT 591
Query 211 -GTGGACTGT-----------GAGAGC------------GTCTACCCCATTGTG-------------------- 240
.|| |||| |||||| ||||.|.|||...||
Sbjct 592 TCTG--CTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCATGGCT 663
Query 241 -------------------------------------------------------------------------- 240
Sbjct 664 TCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAATCATTAGGCGTCTTCCCTTCGCTCCCCACTT 737
Query 241 -------------------------------------------------------------------------- 240
Sbjct 738 TTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCAC 811
Query 241 -------------------------------------------------------------------------- 240
Sbjct 812 TGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAGCCTCCTGAGTAGCTGGGATTACAGGTCCCCG 885
Query 241 -------------------------------------------------------------------------- 240
Sbjct 886 CCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGG 959
Query 241 -------------------------------------------------------------------------- 240
Sbjct 960 CTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGC 1033
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1034 CATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAGCCCTCCCT 1107
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1108 GCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAAAAATCAGT 1181
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1182 TAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGA 1255
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1256 GGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGG 1329
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1330 GCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTG 1403
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1404 GAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTCAAAAAACA 1477
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1478 AAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCAGTTAGTTCGATTATTAGAAGACTAGATTATTG 1551
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1552 CTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAGGAGGAATGTACCTCCCCACCCATTCCTGTTAG 1625
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1626 GCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGTG 1699
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1700 CTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCTG 1773
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1774 GCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGA 1847
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1848 GCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTGG 1921
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1922 CACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCTG 1995
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1996 GGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGATGCTGCATTGAATTGAGCAAAGGAACTGAGTGC 2069
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2070 CCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTGC 2143
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2144 TTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCTG 2217
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2218 CCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTCACCCACATCAACCCACATGGGATACTTTATTT 2291
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2292 ATTTATTTATCTATTTATTTATTTATTTATTTATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGTG 2365
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2366 CCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGAG 2439
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2440 TAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCTC 2513
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2514 TCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGGG 2587
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2588 ATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGG 2661
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2662 GACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGC 2735
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2736 CACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCT 2809
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2810 GACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCC 2883
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2884 CTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTT 2957
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2958 AACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTT 3031
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3032 CCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCAT 3105
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3106 TCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGA 3179
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3180 ACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCACTGCAGCCG 3253
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3254 CCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCACCACCAGG 3327
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3328 CCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTG 3401
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3402 AACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAA 3475
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3476 CTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGT 3549
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3550 ATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTT 3623
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3624 TGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCT 3697
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3698 CTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGG 3771
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3772 CAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCA 3845
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3846 ACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTA 3919
Query 241 ------------------------------------------ 240
Sbjct 3920 AACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 3961
