Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13743
- Subject:
- XM_006720917.4
- Aligned Length:
- 1567
- Identities:
- 581
- Gaps:
- 929
Alignment
Query 1 ATGATGAGCCGCTGTCTCATTCTGCAAATGGTGAAGCTCTCTATTGTCCTGACCCCACAGTTCCTGTCGCATGA 74
|||||||||||||||||||||||||||||||.|||||||||.|||||
Sbjct 1 ---------------------------ATGGTGAAGCTCTCTATTGTCCTGACCCCACGGTTCCTGTCCCATGA 47
Query 75 CCAGAGCCAGCTCACCAAGGAGCTGCAGCAGCATGTAAAGTCAGTGACATGCCCATGCGAGTACCTGAGGA--- 145
||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 48 CCAGGGCCAGCTCACCAAGGAGCTGCAGCAGCACGTAAAGTCAGTGACATGCCCATGCGAGTACCTGAGGAAGG 121
Query 146 -------------------------------------------------------------------------- 145
Sbjct 122 TGACCTTGAGGAACCCTGGGAGCTCAGGAAGGAAGGAGCGCCCAGAAGCAGGGACAGGGAGCTGGTTGGGGAGG 195
Query 146 ----------AGGTTATCAATAGTCTGGCTGTCTATCGTCATCGTGAGACTGACTTTGGTGTAGGAGTTCGAGA 209
||||||||||||.||||||||.|.||||||||||||.|||||||||||||| |.|||.|
Sbjct 196 ACCAGAAGTCAGGTTATCAATACTCTGGCTGACCATCGTCATCGTGGGACTGACTTTGGTG--GAAGTCC---- 263
Query 210 CCACCCTGGCCAACATGGCAAAACCCCATCTCCACAAAAATTGGATAATTTGATAATTATCATTATTGGGTTTC 283
||.|.||.|||||||||.||.|||||
Sbjct 264 ------------------------------------------------TTGGTTACTTATCATTACTGTGTTTC 289
Query 284 TGAGACGTTACACATTTAACATTCT-CTTCTGCACAAGTTGCCTTTGTGTGTCTTTCCTGAAGACTATCTTCTG 356
|||||.||||.|.||||..|| ||| |.||||||||||||.|||||||||||||||||||||||||||||||..
Sbjct 290 TGAGAAGTTATAAATTTGCCA-TCTCCCTCTGCACAAGTTACCTTTGTGTGTCTTTCCTGAAGACTATCTTCCC 362
Query 357 GTCTCGAAATGGACATGATGGATCCATGGATGTACAGCAGAGAGCCTGGAGGTCCAACCACAGTAGACAGAAAG 430
|||||.||||||||||||||||||||.|||||||||||||||||||.||||||||||||.|.||||||||.|
Sbjct 363 GTCTCAAAATGGACATGATGGATCCACGGATGTACAGCAGAGAGCCAGGAGGTCCAACCGCCGTAGACAGGA-- 434
Query 431 GGCTGAGGTCCATTTGTATGCACACAAAGAAAAGAGTTTCTTCCTTTCGAGGAAATAAAATTGGCCTGAAAGAC 504
|||||.||||||||.||||.|||||
Sbjct 435 -------------------------------------------------AGGAATTAAAATTGTCCTGGAAGAC 459
Query 505 GTCATTACTCTACGGAGGCATGTGGAAACAAAAGTTAGAGCTAAAATCCGTAAGAGGAAGGTGACAACGAAAAT 578
.||.|||||.||.||||.||.||||||||.||||||.|||||||||||.||||||.||||||||||||.|||.|
Sbjct 460 ATCTTTACTTTATGGAGACAGGTGGAAACCAAAGTTCGAGCTAAAATCTGTAAGATGAAGGTGACAACAAAAGT 533
Query 579 CAACCGTCATGACAAAATCAATGGAAAGAGGAAGACCGCC---------------------------------- 618
||||||||||||||||||||||||||||||||||||||||
Sbjct 534 CAACCGTCATGACAAAATCAATGGAAAGAGGAAGACCGCCAAAGAACATCTGAGGAAACTAAGCATGAAAGAAC 607
Query 619 ----------AGAAAA--------------CAGA---------------------------------------- 628
|||||| ||||
Sbjct 608 GTGAGCACGGAGAAAAGGAGAGGCAGGTGTCAGAGGCAGAGGAAAACGGGAAATTGGATATGAAAGAAATACAC 681
Query 629 ----------AAATGTTTCAACGTGCGCAAGAGTTGCGGCGGCGGGCAGAGGACTACCACAAATGCAAAATCCC 692
|||||||||||||||||||||.|||||||||||||||||||||||||.|||.||||||||||.|
Sbjct 682 ACCTACATGGAAATGTTTCAACGTGCGCAAGCGTTGCGGCGGCGGGCAGAGGACTACTACAGATGCAAAATCAC 755
Query 693 CCCTTCTGCAAGAAAGCCTCTTTGCAACTGGGTCAGAATGGTGGCAGCGGAGCATCGTCATTCTT-CAGGATTG 765
|||||||||||||||||||||||||||| |||.||| ||| || |||
Sbjct 756 CCCTTCTGCAAGAAAGCCTCTTTGCAAC-------------------CGGTGCA--------CTTACA--ATT- 799
Query 766 CCCTACTGGCTCTACCTCACAGCTGAAACTTTAAAAA----ACAGGATGGGCCGCCA-GCCACCTCCTCCAACT 834
|||...|||||...|| ||||| |.||| ||| |||| |||
Sbjct 800 ------TGGTATTACCTGGGAG-TGAAA----AGAAATATTACA---------GCCATGCC------------- 840
Query 835 CAACAACATTCTATAACTGATAACTCCCTGAGCCTCAAGACACCTCCTGAGTGTCTGCTCACTCCCCTTCCACC 908
Sbjct 841 -------------------------------------------------------------------------- 840
Query 909 CTCAGTGGATGATAATATCAAGGAGTGTCCTCTTGCTCCTCTTCCACCCTCTCCTCTTCCACCCTCAGTGGATG 982
Sbjct 841 -------------------------------------------------------------------------- 840
Query 983 ATAATCTGAAGGAATGTCTCTTTGTCCCGCTTCCACCCTCTCCTCTTCCACCCTCAGTGGATGATAATCTGAAG 1056
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1057 GAATGTCTCTTTGTCCCGCTTCCACCCTCTCCTCTTCCACCCTCAGTGGATGATAATCTCAAGACTCCTCCCTT 1130
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1131 AGCTACTCAGGAGGCCGAGGTGGAAAAACCACCCAAACCCAAGAGGTGGAGGGTGGATGAGGTGGAACAATCAC 1204
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1205 CGAAACCCAAGAGGCGGAGGGTGGATGAGGTGGAACAATCGCCCAAGCCCAAGAGGCAGAGGGAGGCCGAGGCA 1278
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1279 CAACAATTACCCAAACCCAAGAGGCGGAGGTTGAGTAAGCTGAGAACACGCCATTGCACTCAAGCCTGGGCAAT 1352
Sbjct 841 -------------------------------------------------------------------------- 840
Query 1353 AAGAATAAATCCG 1365
Sbjct 841 ------------- 840
