Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13781
- Subject:
- NR_103777.1
- Aligned Length:
- 2456
- Identities:
- 251
- Gaps:
- 2174
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCCAGACGCAGCCGAGTATCTTGAGGAGAAGGACTTTAAAGCGTTCAGGGATTTTAGCTGCCGCTGTGGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCCGCTGTTCTTCCGCTGGAGGGCGCAGTAGTTCCTTAAGAGGGAATGGTGCGGCGAATAGCTGTGAGTTC 148
Query 1 ------------ATGGAGTCTTGCTC-TGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAAC 61
|..||||.|||||| |||..|||||||||||||||||||||||||||||..|||||.|||||
Sbjct 149 AAAGTCCTGACTACAGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCGCAAC 222
Query 62 CTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAG----GTGCC---- 127
||||||.|.||||||||||||||||||||||.||||||||||||||||||||||||||||| |||||
Sbjct 223 CTCTGCTTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCA 296
Query 128 -------------------------------------------------------------------------- 127
Sbjct 297 AGCCCAGACAGAATCTTGCCCTATCACCCAGGCTGTAGTGCCGTGGTATAATCTTGGCTCGCCGCAACCTCCGC 370
Query 128 ------------------------------------------------------------CACCACCACAGCTG 141
||||||||||.|||
Sbjct 371 CTCCTGGGTTCAAGCCATTCTCCTGCTTCAGCCTCCTGAGTAGCTGTGACTACAGGCGTGCACCACCACACCTG 444
Query 142 GCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTCTCGAACTCCTGACCTCAG 215
|||||||||||||||||||||||||||.||||||.||||||||||||||.|||||||.|||||||||||||||.
Sbjct 445 GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTGGCCAGGCTGGTCTTGAACTCCTGACCTCAA 518
Query 216 GTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCTGGCCATT------- 282
|||.|.|.||.||||.|||.|.|||||||||||||||||.|||..||||||||||.|||.|.||||.
Sbjct 519 GTGATTCACCCGCCTGGGCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCCGACCATAACTCTAA 592
Query 283 -------------------------------------------------------------------------- 282
Sbjct 593 CATTTTATCATCAAGAAATGCTTGCTATATGTATACATACATTAGATTCACAGCCTGCATAAGAGTTTGTGTGA 666
Query 283 -------------------------------------------------------------------------- 282
Sbjct 667 TTTCTTACTTAGTAAATACTGAGTGGTAAGGACAATTCCAAATTCATCCCATGAAAGTTAATAGGGAATTCCTA 740
Query 283 -------------------------------------------------------------------------- 282
Sbjct 741 GCAGGTCATAGGTCAGATAGAAAATCTGTCCTTCATGAAACGCTGAGGACGTGCAATTCCAATTAAACCCACTC 814
Query 283 -------------------------------------------------------------------------- 282
Sbjct 815 AATCTGGAGAAAGAAATCAAAGGGAGGGGGTGGGCCTGGAAAGAGTACATCTTATCTTCAGGTACTGTTTGTTT 888
Query 283 -------------------------------------------------------------------------- 282
Sbjct 889 GATTTTTTTTAATACTTGGGGTTTGTTTCTGGGAAGAATTCTTGACCTGGCAAAAATTCATAGTAATTACTCAG 962
Query 283 -------------------------------------------------------------------------- 282
Sbjct 963 GGGAAAGGAAAAAGAAGAAACAAACAAACAAAAAATACATTAATGTGGTTGGAAAAAAAATCTAAGAACATGGT 1036
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1037 GTTGGTGGGAGAGAAGACTAAATGTTTGTGGAAGACCCACCCAAGTGCTTTTGATGTTTGACCAGTTATTATCT 1110
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1111 TATTGTTCTTCCTGCTATAGATACAGCTGCAATTTATGTAACAGGATGTTTAAAAAGATTAAAGAGAATCTGTA 1184
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1185 GTAGGGTTCTGAGATGATAAGAGTCCCTAGAATATGCATTTATGGACGTTTAGAATATAAGTTCCTGTACATTC 1258
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1259 TTAGAATAAACCATCTATTTGTTTCCTTTTTTAAAAAAGAAACAAACAAAATTTGTATTTCAGTATGGCTGCTT 1332
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1333 CCTTCCAGCAAGTGATATGGAATAACAGGCAAAGACAGCAAACCAATAACAGAGCAAAGACAAGTTGGTGCTGG 1406
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1407 TTCAAACTGTGGCCCATGCCGGTTCTTAATTAGCTTTGAGCTTTGAGTCTAAAATGTTTTAACTCTACATTATA 1480
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1481 CACGTGTTTGGAATTTATTTGGATTCAACCTGTTCATCAGAAAATGGGTTATTCTATGATACAAGCAGGATCAT 1554
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1555 TGTGTGAAATTTATGACTGCAATCACCCAACGTGAAGATGAAAGTTTAAACATTTTTTTGCTAGAGGAGTTTTC 1628
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1629 AAAAAAAAAAAAAAAAAGTGTTCTATAGATGTCCCAAACATACAGAGTGACTTACTGGCGTTTAAGTCTTTCTG 1702
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1703 CCATGTGGAGTGCTATCTTAAGTGATAAATTGGCACTGGGCACTTGATAAAAGGTCATTGGGCATATTCTCCAA 1776
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1777 GTTTCTGGTGTTAGTCATGAATTAATTGCTTGTTAACTTTAATTCTCCTAGCAACCTAGGCTAATACCTACTGC 1850
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1851 ACACTTGCTCTCTCTCTCTCACTGTATTTCTGTGCATGTGTATGTGCATAATTTTTTTCTGAACTTGTTTCTGT 1924
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1925 TTGATAATAACTTACAGACATGATGCCCCTTTCCATTAAGCACTTCAGTGGATATTTTCTTTTCTTTGTTTTTT 1998
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1999 TTTTTTTTTTTGAGACAGAGTTTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCAACTCACTGCAA 2072
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2073 CCTCTGCCTCCTGGATTCCAGCTATTCTCCTGCCTCAGCCTCCAGGTAGCTGGGACTACATGCATATGCCACCA 2146
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2147 TGCCCAGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGAC 2220
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2221 CTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCACGCCCCGCCAGTGTAT 2294
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2295 ATTTTCTAAAAACAAGGATATTCTCTTTCATAACCACAATTATAAAAATTAAGAAATCAATATTGATTCAATAA 2368
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2369 TATTTTCTAACCTACAGACCTCATTTGAATTTGCTCAAATGTTCCAATAATGTCCATTATGGTAAAATAAATTC 2442
Query 283 -------------- 282
Sbjct 2443 TATATCATACATTG 2456
