Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13781
- Subject:
- NR_145525.1
- Aligned Length:
- 1991
- Identities:
- 243
- Gaps:
- 1714
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCGGTTTTGCTTTCACTGTGACAAAGCAGCATCAAATTCAATGCAATGTCTCACAATAGCTGCGCTCTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTTCCAAGCACAGAGATTCTCTCTCTACGCCACAAAGCCACTGCCATGGGATGGGGACAGGTGGCATCAGCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCAAGACTGTCTTCCCTACCCTCTTCATTGCCTCTTTCAACAGTATGAAGTTAAAATCAGGACTACCCAGGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGGGAGCTGCCTTCACTCACCCTTTCCCACTACTGCTTCCAGAAACATCTCCCCATCACTACACTAGGGACTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTAAGCACAGATGTGGGACCCATGAGTACTACAGAAGGAAGCAGAAGCTGCAAAGACCTTGGTTTCTCTGGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTCCAACAGCAAGTATCGCCAGGAGCAGCTCCCTAATCTACATACTACAGATCTATCCACAAGAAGACAGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAACCACTCTTTTCTTCTGAATTCTAGAACCTTAAGGAAGTTAACCTGAGTGGCTCAGCTTGGATCAAGTGCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCCTGGTCCAAACAACTGTAGCAGCACATCTGTGTATTTGTGTATCTTGTTCCTCCATAATCTTGCAGTCCGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAAAGTGTGCAGATGGATGGGTCCCTGAAAAGCAAGAGTTGTTTAGACAACGCTAGAGGTGTTCAGTTCTGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGACAAGAGTTGGGCCAGGTTGATAACTAGCCTAAGAGAGTCGGAATCAGATGAATAAGAACTAGATCTTGGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GACAACCTAGATCAAGAGTCTTGAGGTTCAGTCATTTCAAAAAGCTCAAGTCTCATTGCTTCTTGGCCTTCTGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTAAGATCATGTGCAGTATCTGTTCTTACCAGTTTAATATCTGATACATCCTCTATCTGAGGATAATATAATAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATAGATTTTTGGAGCAAGGAGATGGAATAGGAGCTTGCTCTGTCCACTCTACACATTGGCCTGGATTGCAGTAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCAGGAATGGTGCACCCTCTCTACCACCCCCAAAAAGCCCAAGTCTCAAGAGGTAGTCTGGAAAAAAGTGTT 1036
Query 1 ------------------------------ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGA 44
|||||||||.|||||||||||||||||||||||||.||||||.|
Sbjct 1037 TTTGGATTTACCTACATTTTTTTTTCCAAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCCA 1110
Query 45 TCTCCACTCACTGCAACCTCTGCGTACCAGG-TTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGAT 117
|||...|||||||.|||||||||.| ||||| |||||||..||||||||.|||||.||||..||||||||||||
Sbjct 1111 TCTTGGCTCACTGTAACCTCTGCCT-CCAGGATTCAAGCAGTTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGAT 1183
Query 118 TACAG----GTGCCCACCACCACAGCT-GGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGG 186
||||| |||||.|||| .||| .||||||||||.||||||||||||||||.||||||.|||||.||||
Sbjct 1184 TACAGGTGTGTGCCAACCA----TGCTCAGCTAATTTTTCTATTTTTAGTAGAGACAGGGTTTCACCATGTTGG 1253
Query 187 CCAGACTGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAG 260
||||.|.||||||.||.|||||||||||||||.||.||||||||||||.||||.|||||||..|||||.|||.|
Sbjct 1254 CCAGGCAGGTCTCAAAGTCCTGACCTCAGGTGATCTGCCTGCCTTGGCCTCCCGAAGTGCTAAGATTACAGGCG 1327
Query 261 TGAGCCACTGCGCCTGGCC--ATT-------------------------------------------------- 282
||||||||||||||.|||| |||
Sbjct 1328 TGAGCCACTGCGCCCGGCCTAATTTTTGTAATTTTAGTAGAGACGAGTTTTCACCATGTTGACCAGGCTGGTCT 1401
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1402 CGAACTCCTGACCTCAGGTGATCCACCCCCGCCCTCGGCCTCCCAAAGTGCTGGCACTACAGGCATGAGCCACC 1475
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1476 GCTCCTGGCCGGGTTTGCCTACATTTTGGAGATGCTGCACACCATGTCCCTCTTTTCAAGAGTCACGTAAGTAT 1549
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1550 TTACATATGGAAGACCCTGAGAAGGCACCTGGGAAAAAACCTGTTTAACTGTAAATATAATAATGTATGTATTT 1623
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1624 GTATGTGGAGCTCTTCTTTTAGTGGATTATCTATAAACCGTCCACTGTTCCCAATGCATACTTTGGAGACAGAC 1697
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1698 CTACACTACCAGTTTTCACCTGCTAGTTATTTTTATAAGGGTTGGGATGGTCCATGAGTGAACAGTCTTGATTT 1771
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1772 AAAGCAGTGTTTCCCAAACCTCATTTATTTGCCTATAGCCTTCCTGGAGTTTGTCTTATATGTCCGCTCTGTGC 1845
Query 283 -------------------------------------------------------------------------- 282
Sbjct 1846 ACTATTCCTATATGTTTTTATGTAAATCAATCACTTTTTTAAAAAGCCTCATCCCAGTTATATCCTTAAAACAA 1919
Query 283 ------------------------------------------------------------------- 282
Sbjct 1920 TGGTTATTTTTTCTCATACACATCGAAATACATATCTATTAGAATTAAAATGCTTGTCCATGCACTA 1986