Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13846
Subject:
NM_144491.2
Aligned Length:
1328
Identities:
928
Gaps:
253

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGCGCTGGTTGTGTCCGAGACTGCGGAGCCAGGAAGCCGAGTCGGCCCTGGCAGAGGTCGCATCTCTCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGGCGACTGGCCAATCAGATCCCCCCTGAGGTCCTGAACAACCCCCAGTTACAGGCTGCTGTCCAAGTTCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTTCTAACTACAACTTTGAGATCCCCAAAACCATCTGGAGAATCCAGCAGGCCCAGGCCAAGAAGGTGGCCTTA  222

Query    1  ---ATGCCGGAAGGCCTCCTCCTCTTTGCCTGTACCATTGTGGATATCTTGGAAAGGTTCACGGAGGCCGAAGT  71
               |||||.|||||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||.||.||
Sbjct  223  CAAATGCCAGAAGGCCTCCTCCTCTTTGCCTGCACTATTGTGGATATCTTGGAAAGGTTCACAGAGGCTGAGGT  296

Query   72  GATGGTGATGGGTGACGTGACCTACGGGGCTTGCTGTGTGGATGACTTCACAGCGAGGGCCCTGGGAGCTGACT  145
            |||||||||||||||.||.|||||.||||||||||||||||||||||||||.||.||||||.||||||.|||||
Sbjct  297  GATGGTGATGGGTGATGTCACCTATGGGGCTTGCTGTGTGGATGACTTCACTGCAAGGGCCTTGGGAGTTGACT  370

Query  146  TCTTGGTGCACTACGGCCACAGTTGCCTGATTCCCATGGACACCTCGGCCCAAGACTTCCGGGTGCTGTACGTC  219
            ||.||||||||||.||.|||||.||.||..|.||||||||||||||.|..|||||||||||.||..||||.|||
Sbjct  371  TCCTGGTGCACTATGGTCACAGCTGTCTAGTCCCCATGGACACCTCCGTTCAAGACTTCCGAGTCTTGTATGTC  444

Query  220  TTTGTGGACATCCGGATAGACACTACACACCTCCTGGACTCTCTCCGCCTCACCTTTCCCCCAGCCA-CTGCCC  292
            ||.|||||.|||||||||||||||.|.|||||.||||||||..||||||||||||||.||||||.|| || |.|
Sbjct  445  TTCGTGGATATCCGGATAGACACTGCCCACCTTCTGGACTCGGTCCGCCTCACCTTTACCCCAGGCAGCT-CAC  517

Query  293  TTGCCCTGGTCAGCACCATTCAGTTTGTGTCGACCTTGCAGGCAGCCGCCCAGGAGCTGAAAGCCGAGTATCGT  366
            |.||.||||||||||||||||||||||||||.|||||.||||||||.||.||||||||||||||.||.||||..
Sbjct  518  TCGCTCTGGTCAGCACCATTCAGTTTGTGTCAACCTTACAGGCAGCTGCACAGGAGCTGAAAGCTGATTATCAC  591

Query  367  GTGAGTGTCCCACAGTGCAAGCCCCTGTCCCCTGGAGAGATCCTGGGCTGCACATCCCCCCGACTGTCCAAAGA  440
            .|.||||||||||||||||||||||||||||||||.||||||||.||||||||||||||.||.||.|||||.||
Sbjct  592  ATCAGTGTCCCACAGTGCAAGCCCCTGTCCCCTGGGGAGATCCTAGGCTGCACATCCCCTCGGCTATCCAAGGA  665

Query  441  GGTGGAGGCCGTTGTGTATCTTGGAGATGGCCGCTTCCATCTGGAGTCTGTCATGATTGCCAACCCCAATGTCC  514
            .|||||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||.|.|
Sbjct  666  AGTGGAAGCTGTTGTGTATCTTGGAGATGGCCGCTTTCATCTGGAGTCTGTCATGATTGCCAACCCTAATATAC  739

Query  515  CCGCTTACCGGTATGACCCATATAGCAAAGTCCTATCCAGAGAACACTATGACCACCAGCGCATGCAGGCTGCT  588
            |.|||||||||||||||||||||.||||||||||||||||||||.||||||||||.||||||||||||||..||
Sbjct  740  CTGCTTACCGGTATGACCCATATGGCAAAGTCCTATCCAGAGAATACTATGACCATCAGCGCATGCAGGCCACT  813

Query  589  CGCCAAGAAGCCATAGCCACTGCCCGCTCAGCTAAGTCCTGGGGCCTTATTCTGGGCACTTTGGGCCGCCAGGG  662
            |||||.||||||||.||..||||.||||||||.||.||||||||||||||||||||.||.||||||||||||||
Sbjct  814  CGCCAGGAAGCCATTGCTGCTGCACGCTCAGCCAAATCCTGGGGCCTTATTCTGGGAACCTTGGGCCGCCAGGG  887

Query  663  CAGTCCTAAGATCCTGGAGCACCTGGAATCTCGACTCCGAGCCTTGGGCCTTTCCTTT-GTGAGGCTGCTGCTC  735
            ||||||.|||||||||||||||.|||||||||..|||.||..||||||.| ||||||| |||||||||.|||||
Sbjct  888  CAGTCCCAAGATCCTGGAGCACTTGGAATCTCAGCTCAGAAACTTGGGAC-TTCCTTTCGTGAGGCTGTTGCTC  960

Query  736  TCTGAGATCTTCCCCAGCAAGCTTAGCCTACTTCCCGAGGTGGATGTGTGGGTGCAGGTGGCATGTCCACGTCT  809
            |||||||||||||||||||||||.||.||||||||.|||||||||||||||||||||||||||||||||||.||
Sbjct  961  TCTGAGATCTTCCCCAGCAAGCTCAGTCTACTTCCTGAGGTGGATGTGTGGGTGCAGGTGGCATGTCCACGCCT  1034

Query  810  CTCCATTGACTGGGGCACAGCCTTCCCCAAGCCGCTGCTGACACCCTATGAGGCGGCCGTGGCTCTGAGGGACA  883
            |||||||||||||||..|||||||.||||||||.|||||||||||.||.|||||.||.|||||.||||.|||||
Sbjct 1035  CTCCATTGACTGGGGTTCAGCCTTTCCCAAGCCACTGCTGACACCGTACGAGGCAGCTGTGGCCCTGAAGGACA  1108

Query  884  TTTCCTGGCAGCAGCCCTACCCGATGGACTTCTACGCTGGCAGCTCCTTGGGGCCCTGGACGGTGAACCACGGC  957
            ||||.||||||||.||||||||.||||||||||||.|||||||||||||.|||||.|||||.||||||.||||.
Sbjct 1109  TTTCTTGGCAGCAACCCTACCCCATGGACTTCTACTCTGGCAGCTCCTTAGGGCCATGGACAGTGAACTACGGT  1182

Query  958  CAGGACCGCCGTCCCCA-CGCCCCGG-------GCCGGCCCGCGCGGGGGAAGGTGCAGGAGGGGTCC----GC  1019
            |.||||||        | |.||.|||       |||.|||.||....|..|||||||||.|.||||||    ||
Sbjct 1183  CGGGACCG--------AGCACCTCGGGGTCTCTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGC  1248

Query 1020  GCGTCCCCCTTCGGCCGTGGCTTGCGAGGACTGCAGCTGCAGGGACGAGAAGGTGGCGCCGCTGGCTCCT  1089
            |    .|.||.|.|||...||.||.|||...||||.||||...|||.||||||...|..|||.||||||.
Sbjct 1249  G----GCTCTCCAGCCCCAGCCTGTGAGAGTTGCAACTGCGCAGACCAGAAGGCTACTTCGCCGGCTCCC  1314

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