Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13916
- Subject:
- XM_017315097.1
- Aligned Length:
- 3635
- Identities:
- 2029
- Gaps:
- 1330
Alignment
Query 1 ATGCAGCTTAAAATAATGCCGAAAAAGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTCTCTTCCTGTGCCA 74
|||||||||||||||||||||||.|||||||.|||||||||.|||.||||||||||||||||||||||||||||
Sbjct 1 ATGCAGCTTAAAATAATGCCGAAGAAGAAGCACTTATCTGCAGGCGGAGTGCCCCTGATTCTCTTCCTGTGCCA 74
Query 75 GATGATTAGTGCACTGGAAGTACCTCTTGATCTGGTACAGCCTCCAACCATCACCCAACAGTCTCCAAAAGATT 148
||||||.||.||.|||||.||.|||||.|||||||||||.||||||||||||||.||||||||.||||||||.|
Sbjct 75 GATGATCAGCGCGCTGGATGTTCCTCTCGATCTGGTACAACCTCCAACCATCACTCAACAGTCACCAAAAGACT 148
Query 149 ACATTATTGACCCTCGGGAGAATATTGTAATCCAGTGTGAAGCCAAAGGGAAACCGCCCCCAAGCTTTTCCTGG 222
||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||
Sbjct 149 ACATCATTGACCCTCGGGAGAATATTGTAATCCAGTGTGAGGCCAAAGGGAAACCTCCCCCAAGCTTTTCCTGG 222
Query 223 ACCCGTAATGGGACTCATTTTGACATCGATAAAGACCCTCTGGTCACCATGAAGCCTGGCACAGGAACGCTCAT 296
||.||||||||.|||||.||||||||.||.||.|||||||||||||||||||||||||||.|||||||.||..|
Sbjct 223 ACTCGTAATGGAACTCACTTTGACATAGACAAGGACCCTCTGGTCACCATGAAGCCTGGCTCAGGAACCCTTGT 296
Query 297 AATTAACATCATGAGCGAAGGGAAAGCTGAGACCTATGAAGGAGTCTATCAGTGTACAGCAAGGAACGAACGCG 370
.||.|||||||||||.||.|||||.||.||||||||||||||||||||.|||||.||.|||||||||||.||.|
Sbjct 297 CATCAACATCATGAGTGAGGGGAAGGCAGAGACCTATGAAGGAGTCTACCAGTGCACTGCAAGGAACGAGCGTG 370
Query 371 GAGCTGCAGTTTCTAATAACATTGTTGTCCGCCCATCCAGATCACCATTGTGGACCAAAGAAAAACTTGAACCA 444
|||||||.||.||.|||||||||||||||||||||||.||.|||||.|||||||||||.||||.|||||||||.
Sbjct 371 GAGCTGCCGTCTCCAATAACATTGTTGTCCGCCCATCTAGGTCACCCTTGTGGACCAAGGAAAGACTTGAACCT 444
Query 445 ATCACACTTCAAAGTGGTCAGTCTTTAGTACTTCCCTGCAGACCCCCAATTGGATTACCACCACCTATAATATT 518
||...|||.||.|.|||.|||||.|||||||||||.||.||.||.||.|||||||||||.||..|.||||||||
Sbjct 445 ATAGTACTCCAGAATGGGCAGTCATTAGTACTTCCATGTAGGCCTCCGATTGGATTACCTCCGGCCATAATATT 518
Query 519 TTGGATGGATAATTCCTTTCAAAGACTTCCACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGACCTTTATT 592
|||||||||||||||||||||.|||||||||||.||||||.|.|||||.|||||..|.|||||.||||||||.|
Sbjct 519 TTGGATGGATAATTCCTTTCAGAGACTTCCACAGAGTGAGCGGGTTTCCCAAGGCCTAAATGGAGACCTTTACT 592
Query 593 TTTCCAATGTCCTCCCAGAGGACACCCGCGAAGACTATATCTGTTATGCTAGATTTAATCATACTCAAACCATA 666
|.||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.|||||||||||.
Sbjct 593 TCTCCAATGTCCTCCCAGAGGACACCCGTGAGGACTATATCTGCTATGCCAGATTTAATCACACTCAAACCATC 666
Query 667 CAGCAGAAGCAACCTATTTCTGTGAAGGTGATTTCAGTGGATGAATTGAATGACACTATAGCTGCTAATTTGAG 740
|||||||||||.|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGCAGAAGCAGCCTATTTCTTTGAAGGTGATTTCAGTGGATGAATTGAATGACACTATAGCTGCTAATTTGAG 740
Query 741 TGACACTGAGTTTTATGGTGCTAAATCAAGTAGAGAGAGGCCACCAACATTTTTAACTCCAGAAGGCAATGCAA 814
|||||||||||||||||||||||||||.||||.|||||||||.|||||.|||.||||||||||.|||||||.||
Sbjct 741 TGACACTGAGTTTTATGGTGCTAAATCTAGTAAAGAGAGGCCCCCAACGTTTCTAACTCCAGAGGGCAATGAAA 814
Query 815 GTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGGAGTGCATTGCAGAAGGACTGCCTACCCCAATTATT 888
|..||||||||||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.|||||||||
Sbjct 815 GCCACAAAGAGGAATTAAGAGGAAACGTGCTTTCGCTGGAGTGCATTGCGGAAGGCCTACCTACTCCAATTATT 888
Query 889 TACTGG-GCAAAGGAAGATGGAATGCTACCCAAAAACAGGACAGTTTATAAGAACTTTGAGAAAACCTTGCAGA 961
|||||| .|||| |||||.||||||||.|||...|||.|||||.|||||..|||||||.||||||||.||||||
Sbjct 889 TACTGGATCAAA-GAAGACGGAATGCTTCCCGCCAACCGGACATTTTATCGGAACTTTAAGAAAACCCTGCAGA 961
Query 962 TCATTCATGTTTCAGAAGCAGACTCTGGAAATTACCAATGTATAGCAAAAAACGCATTAGGAGCCATCCACCAT 1035
|||.|||||||||.|||||.||||||||||||||.||.||.||||||||||||||||||||||||.||||.||.
Sbjct 962 TCACTCATGTTTCCGAAGCCGACTCTGGAAATTATCAGTGCATAGCAAAAAACGCATTAGGAGCCGTCCATCAC 1035
Query 1036 ACCATTTCTGTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCCCCTCAAAATCTTGTGCTGTCCCCAGGAGA 1109
|||||||||||.|..||||||||||||||.|||||||||...||.||||||||.||.|||||.|||||.|||||
Sbjct 1036 ACCATTTCTGTCACTGTTAAAGCGGCTCCCTACTGGATCGTGGCACCTCAAAACCTCGTGCTTTCCCCGGGAGA 1109
Query 1110 GGATGGGACCTTGATCTGCAGAGCTAATGGCAACCCCAAACCCAGAATTAGCTGGTTAACAAATGGAGTCCCAA 1183
|.||||||||.|.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1110 GAATGGGACCCTCATCTGCAGAGCTAATGGCAACCCGAAACCCAGAATTAGCTGGTTAACAAATGGAGTCCCAA 1183
Query 1184 TAGAAATTGCCCCTGATGACCCCAGCAGAAAAATAGATGGCGATACCATTATTTTTTCAAATGTTCAAGAAAGA 1257
||||||||||.|..||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct 1184 TAGAAATTGCTCTCGATGACCCCAGCAGAAAAATAGATGGCGATACCATTATATTTTCAAATGTTCAAGAAAGC 1257
Query 1258 TCAAGTGCAGTATATCAGTGCAATGCCTCTAATGAATATGGATATTTACTGGCAAACGCATTTGTAAATGTGCT 1331
||||||||.||.||||||||||||||||||||..||||||||||||||||.|||||.||||||||||||||.||
Sbjct 1258 TCAAGTGCGGTTTATCAGTGCAATGCCTCTAACAAATATGGATATTTACTAGCAAATGCATTTGTAAATGTTCT 1331
Query 1332 GGCTGAGCCACCACGAATCCTCACACCTGCAAACACACTCTACCAGGTCATTGCAAACAGGCCTGCTTTACTAG 1405
.|||||.|||||.||.||.||||||.|.|||||||||||.|||||||||||||||||||||||||||||.||||
Sbjct 1332 CGCTGAACCACCTCGGATTCTCACATCAGCAAACACACTGTACCAGGTCATTGCAAACAGGCCTGCTTTGCTAG 1405
Query 1406 ACTGTGCCTTCTTTGGGTCTCCTCTCCCAACCATCGAGTGGTTTAAAGGAGCTAAAGGAAGTGCTCTTCATGAA 1479
|.||||||||||||||.||||||.|.||.|||||.||||||||||||||..||||||||||.||||||||||||
Sbjct 1406 ATTGTGCCTTCTTTGGATCTCCTATGCCTACCATTGAGTGGTTTAAAGGCACTAAAGGAAGCGCTCTTCATGAA 1479
Query 1480 GATATTTATGTTTTACATGAAAATGGAACTTTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGGAACTTATAC 1553
||.|||||||||||.|||||.||||||||.||.||||||||.||||||||||||||.||||||||.||.|||||
Sbjct 1480 GACATTTATGTTTTGCATGATAATGGAACATTAGAAATTCCCGTGGCCCAAAAGGATAGTACAGGGACGTATAC 1553
Query 1554 GTGTGTTGCAAGGAATAAATTAGGGATGGCAAAGAATGAAGTTCACTTAGAAATCAAAGATGCTACATGGATCG 1627
.|||||.|||.||||||||.||||||||||||||||||||||||||||.||||||||||||.|.||..|||||.
Sbjct 1554 TTGTGTCGCACGGAATAAACTAGGGATGGCAAAGAATGAAGTTCACTTGGAAATCAAAGATCCAACCAGGATCA 1627
Query 1628 TTAAACAGCCCGAATATGCAGTTGTGCAAAGAGGGAGCATGGTGTCCTTTGAATGCAAAGTGAAACATGATCAC 1701
|||||||.||.||.||||||||.||.||.||.|||||||.|||||||||||||||||.||||||||||||.|||
Sbjct 1628 TTAAACAACCTGAGTATGCAGTCGTCCAGAGGGGGAGCAAGGTGTCCTTTGAATGCAGAGTGAAACATGACCAC 1701
Query 1702 ACCTT-ATCCCTCACTGTCCTGTGGCTGAAGGACAACAGGGAACTGCCCAGTGATGAAAGGTTCACTGTTGACA 1774
||||| ||||| |||..|..||||||||||||||||..|.||.|||||||.|||||||||||||.|...|||||
Sbjct 1702 ACCTTAATCCC-CACCATTATGTGGCTGAAGGACAATGGAGAGCTGCCCAATGATGAAAGGTTCTCCACTGACA 1774
Query 1775 AGGATCATCTAGTGGTAGCTGATGTCA---GTGACGATGACAGCGGGACCTACACGTGTGTGGCCAACACCACT 1845
||||||||||.||||||.|||||||.| .|||||||| ||||.||||||||||||..|||||||||.||.
Sbjct 1775 AGGATCATCTGGTGGTATCTGATGTAAAGGATGACGATG---GCGGAACCTACACGTGTACGGCCAACACAACG 1845
Query 1846 CTGGACAGCGTCTCCGCCAGCGCTGTGCTTAGCGTTGT------------------------------TGATGT 1889
||||||||.|..||.||||||||||||||.||.||||| .|||||
Sbjct 1846 CTGGACAGTGCTTCGGCCAGCGCTGTGCTCAGGGTTGTCGCTCCTACTCCAACTCCAGCCCCCATTTACGATGT 1919
Query 1890 CCCAAATCCTCCCTTTGACTTAGAACTGACAGATCAACTTGACAAAAGTGTTCAGCTGTCATGGACCCCAGGCG 1963
|||.||||||||||||||.||||||.||||..||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1920 CCCGAATCCTCCCTTTGATTTAGAATTGACCAATCAACTTGACAAAAGTGTTCAGCTGACATGGACCCCAGGCG 1993
Query 1964 ATGACAACAATAGCCCCATTACAAAATTCATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCAC 2037
|.||||||||||||||||||||||||||||||||.||.|||||||||||||||||..|..||||||||||||.|
Sbjct 1994 ACGACAACAATAGCCCCATTACAAAATTCATCATTGAGTATGAAGATGCAATGCATGATGCAGGGCTGTGGCGC 2067
Query 2038 CACCAAACTGAAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGCTGTCTCCTTACGTGAACTACTCCTTCCG 2111
|||||..|||||||||||||||||||||||||||||||.||||||||||||||.||.|||||||||||||||||
Sbjct 2068 CACCAGGCTGAAGTTTCTGGAACACAGACCACAGCCCAACTGAAGCTGTCTCCCTATGTGAACTACTCCTTCCG 2141
Query 2112 CGTGATGGCAGTGAACAGCATTGGGAAGAGCTTGCCCAGCGAGGCCTCTGAGCAGTATTTGACGAAAGCCTCAG 2185
.||.|||||||.||||||||||||||..||..||||.||||||||.||.|||||||||.|.||.||||||.|||
Sbjct 2142 TGTCATGGCAGAGAACAGCATTGGGAGAAGTATGCCGAGCGAGGCATCCGAGCAGTATCTTACAAAAGCCGCAG 2215
Query 2186 AACCAGATAAAAACCCCACAGCTGTGGAAGGACT-GGGATCAGAGCCTGATAATTTGGTGATTACGTGGAAGCC 2258
||||||||.|.||.||||..|||||||||||||| |||| |||||||.||.||.|||||||||||.||||||||
Sbjct 2216 AACCAGATCAGAATCCCATGGCTGTGGAAGGACTAGGGA-CAGAGCCGGACAACTTGGTGATTACATGGAAGCC 2288
Query 2259 CTTGAATGGTTTCGAATCTAATGGGCCAGGCCTTCAG-ACAA---GTACTGCCTCTTCT--------------- 2313
|.||||||||||..||||.||||||||.|||||.||| |||| |..|||.|.| |.
Sbjct 2289 CCTGAATGGTTTTCAATCGAATGGGCCTGGCCTCCAGTACAAAGTGAGCTGGCGC--CAGAAAGATGGTGACGA 2360
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2361 TGAGTGGACGTCTGTGGTTGTGGCCAATGTATCCAAATACATTGTTTCTGGCACACCAACCTTTGTCCCATACC 2434
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2435 TGATAAAAGTTCAAGCTCTGAATGATGTGGGGTTTGCACCAGAGCCAGCTGCAGTCATGGGGCATTCTGGAGAA 2508
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2509 GACCTTCCAATGGTGGCTCCTGGAAATGTTCGCGTCAGCGTGGTGAACAGTACGCTGGCAGAGGTGCACTGGGA 2582
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2583 CCCAGTTCCTCCCAAGAGTGTCCGAGGACACTTACAAGGCTACCGGATTTACTACTGGAAGACCCAGAGCTCCT 2656
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2657 CTAAAAGAAACAGGCGCCACATTGAGAAGAAGATCCTCACCTTCCAGGGCACCAAGACTCACGGCATGCTGCCA 2730
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2731 GGGCTGCAGCCATACAGTCACTATGCCCTCAACGTCCGAGTGGTCAACGGGAAAGGGGAGGGCCCAGCCAGCAC 2804
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2805 GGACAGAGGCTTCCATACACCGGAGGGAGTCCCTAGTGCTCCCTCATCTTTGAAAATTGTTAATCCCACACTGG 2878
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2879 ACTCCCTCACTTTGGAATGGGACCCCCCAAGCCACCCAAATGGCATCCTGACTGAGTACATCTTACAATATCAG 2952
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 2953 CCAATTAACAGCACACATGAGCTAGGCCCTCTGGTAGATTTAAAAATTCCTGCCAACAAGACCCGCTGGACTTT 3026
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3027 GAAAAATTTAAATTTCAGCACTCGGTACAAGTTCTATTTCTATGCACAGACATCAGTGGGGCCAGGCAGTCAGA 3100
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3101 TCACAGAGGAAGCGATAACGACTGTGGACGAAGCTGGTATTCCTCCACCTGATGTAGGTGCAGGCAAAGCAATG 3174
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3175 GCAAGCCGGCAAGTGGATATCGCGACCCAAGGCTGGTTCATAGGTCTAATGTGCGCTGTTGCTCTCCTCATCTT 3248
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3249 AATTTTGCTGATTGTTTGCTTCATCAGAAGAAACAAAGGTGGTAAATACCCAGTTAAAGAAAAGGAGGATGCTC 3322
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3323 ATGCAGACCCTGAAATCCAGCCCATGAAGGAAGATGATGGGACGTTTGGAGAATACAGGTCTTTTGAAAGTGAT 3396
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3397 GCAGAAGATCACAAGCCTTTGAAAAAAGGAAGTCGAACACCTTCAGACAGGACTGTGAAAAAAGAAGATAGCGA 3470
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3471 TGATAGTCTGGTTGACTATGGAGAGGGGGTGAACGGCCAATTCAACGAGGATGGCTCCTTTATTGGCCAATACA 3544
Query 2314 -------------------------------------------------------------------------- 2313
Sbjct 3545 GTGGTAAGAAAGAGAAAGAGCCAGCAGAGGGAAATGAAAGCTCAGAGGCCCCTTCTCCTGTCAACGCAATGAAC 3618
Query 2314 --------- 2313
Sbjct 3619 TCCTTTGTT 3627
