Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14033
• Subject: XM_006505986.3
• Aligned Length: 3346
• Identities: 2159
• Gaps: 908

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTTGCCGAAGACGCTATTTGAGCTCCCTGGAAACCGGAAGCAGCCTCTCTACTGACCGATACAGTGTTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGCGAGGCCCCCAGCAGCGAGACTGGCACATCGCTGGACAGCCCCTCAGCCTACCATCAGGGTCCCCTGGTAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTGGTTCCAGCCTGAGTCCAGACCACTACGAGCACACATCAGTGGGCGCCTATGGGCTGTACGCAGGGCCAGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCACAACAGCGCACACGGAGGCCCCGGCTGCAGCACTCGACCTCAGTCCTGCGCAAGCAGGCTGAGGAGGAGGC  296

Query    1  ----------------------------------------------------------------------ATGC  4
                                                                                  ||||
Sbjct  297  CATCAAGCGCTCTCGGTCACTCTCTGAGAGCTATGAGCTCTCTTCAGATCTGCAAGACAAGCAGGTGGAAATGC  370

Query    5  TAGAACGAAAGTATGGGGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCAGTAC  78
            |||||||.|||||||||||.|||||.||.|||||||||||.|||||||||||||||||||||||.|||||.|||
Sbjct  371  TAGAACGCAAGTATGGGGGACGCCTCGTGACCCGCCATGCAGCCCGCACCATCCAGACGGCGTTCCGCCAATAC  444

Query   79  CAGATGAACAAGAACTTCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCATGTCACGCCGGATTGTGCTGTC  152
            |||||||||||||||||.||||||.||||||||||||||||.|||||||||||||||||.||.|||||||||||
Sbjct  445  CAGATGAACAAGAACTTTGAGCGCCTGCGCAGCTCCATGTCGGAGAACCGCATGTCACGTCGCATTGTGCTGTC  518

Query  153  CAACATGAGGATGCAGTTCTCCTTTGAGGGGCCTGAGAAAGTGCACAGCTCCTACTTCGAGGGGAAGCAGGTCT  226
            ||||||||||||||||||||||||||||||.||.|||||.|||||||||||||||||.|||||.||||||||||
Sbjct  519  CAACATGAGGATGCAGTTCTCCTTTGAGGGCCCCGAGAAGGTGCACAGCTCCTACTTTGAGGGAAAGCAGGTCT  592

Query  227  CAGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGTGTCCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACC  300
            |.||||||||.||.||||||||||||||.|||||||||.|..|.||.|||||.|||||.||.|| ||||  .||
Sbjct  593  CTGTGACTAATGATGGCTCCCAGCTGGGGGCCCTGGTGCCATCAGAATGTGGAGACCTTAGTGA-CCCA--GCC  663

Query  301  CTCAAGTCTCCGGCCCCCTCCAGTGACTTTGCGGACGCCATCACCGAGCTGGAGGACGCCTTCTCTAGGCAAGT  374
            |||||||||||.||||||||||||||||||||.||.||||||||.||.||||||||.||||||||.|||||.||
Sbjct  664  CTCAAGTCTCCAGCCCCCTCCAGTGACTTTGCAGATGCCATCACGGAACTGGAGGATGCCTTCTCCAGGCAGGT  737

Query  375  GAAATCACTGGCCGAGTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACCGGCCCTGG  448
            ||||||.|||||.||.||||||||.|||||||||||.|||||||||||.||||.||||||||.|||.|||...|
Sbjct  738  GAAATCCCTGGCTGAATCCATCGATGATGCCCTCAATTGCCGCAGCCTACACAGTGAGGAGGTACCAGCCTCAG  811

Query  449  ATGCGGCGCGGGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATG  522
            |..||||.|||||.||||||||.||.|||.|..|||..||.||.|||||||||||||||||||||||.||||||
Sbjct  812  ACACGGCCCGGGCTCGGGACACTGAGCCCAAACCAGGTCTACATGGCATGGACCACCGCAAACTGGATGAGATG  885

Query  523  ACGGCCTCGTACAGTGATGTCACCCTGTACATCGATGAGGAGGAGCTGTCGCCCCCTCTGCCCCTCTCGCAGGC  596
            ||.||||||||.||||||||.|||||.|||||.||||||||.||||||||.||.||.||.||.|||||.|||||
Sbjct  886  ACAGCCTCGTATAGTGATGTGACCCTCTACATTGATGAGGAAGAGCTGTCACCACCGCTTCCACTCTCACAGGC  959

Query  597  AGGGGACCGGCCGTCCAGCACCGAGTCGGACCTGCGGCTACGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCC  670
            .||.||.|||||.||||||||.|||||||||||||||||..||.|||||||.|||||||..||||||||||||.
Sbjct  960  TGGCGATCGGCCCTCCAGCACAGAGTCGGACCTGCGGCTGAGGTCTGGGGGTGCAGCCCAGGACTACTGGGCCT  1033

Query  671  TGGCCCACAAAGAGGACAAGGCTGACACGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGCGGCAGGNGCAG  744
            ||||||||||||||||||||||||||||||||||.||||||||.|||||.||.||.||||||||||..|.||..
Sbjct 1034  TGGCCCACAAAGAGGACAAGGCTGACACGGACACAAGCTGCCGAAGCACACCATCACTGGAGCGGCCAGAGCCA  1107

Query  745  CGGCTGCGGGTGGAGCATCTGCCGCTGCTCACCATCGAGCCACCCAGCGACAGCTCTGTGGACCTTAGTGACCG  818
            |||||||||||||||||.|||||.|||||.|||||.|||||||||||.||.|||||.|||||.||.||||||||
Sbjct 1108  CGGCTGCGGGTGGAGCACCTGCCCCTGCTTACCATTGAGCCACCCAGTGATAGCTCCGTGGAACTCAGTGACCG  1181

Query  819  CTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTTACGAGCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGC  892
            |||.||.||..|.||||||||||||||||||||.||.|||||||||||.||.||||||||||||||.|||||||
Sbjct 1182  CTCAGATCGCAGCTCACTCAAGAGGCAGAGTGCCTATGAGCGCAGCCTCGGTGGGCAGCAGGGCAGCCCCAAGC  1255

Query  893  ATGGTCCCCACAGCGGCGCCCCCAAGAGCCTCCCCCGGGAGGAGCCTGAGTTGCGGCCCCGGCCCCCCAGGCCC  966
            ||||.||||||.|.|||.|||||||..||||||||.|||||||.|||||.||||||||.|||||||||||.||.
Sbjct 1256  ATGGCCCCCACGGTGGCCCCCCCAAAGGCCTCCCCAGGGAGGAACCTGAATTGCGGCCTCGGCCCCCCAGACCT  1329

Query  967  CTGGACAGCCACTTGGCCATCAATGGCTCAGCCAACCGGCAGAGCAAGTCTGAGTCGGACTACTCAGACGGTGA  1040
            ||.||.||.|||.|.|||||||||||.||||||||||||||||||||.||||||||.|||||||||||.||.||
Sbjct 1330  CTTGAGAGTCACCTAGCCATCAATGGTTCAGCCAACCGGCAGAGCAAATCTGAGTCTGACTACTCAGATGGGGA  1403

Query 1041  CAATGACAGCATCAACAGCACGTCCAACTCCAACGATACCATCAACTGCAGCTCCGAGTCATCGTCCCGTGACA  1114
            |||||||||||||||||||||.|||||||||||.||.|||||.|||||||||||.|||||.||.||.||.||||
Sbjct 1404  CAATGACAGCATCAACAGCACCTCCAACTCCAATGACACCATAAACTGCAGCTCTGAGTCCTCATCACGGGACA  1477

Query 1115  GCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGCCTGCCTTT  1188
            ||||||||||.|||||.||||||||||||||.||||||||||||.|||||||||||||||||||.||.||.||.
Sbjct 1478  GCCTGCGGGAACAGACACTCAGCAAGCAGACATACCACAAGGAGACCCGCAACAGCTGGGACTCTCCAGCTTTC  1551

Query 1189  AGCAACGATGTCATCCGCAAGAGGCACTACCGCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGGAGT  1262
            |||||||||||||||||.||||||||.|||||.||.|||||.||.||||||||||||||||||||||||||..|
Sbjct 1552  AGCAACGATGTCATCCGTAAGAGGCATTACCGAATTGGCCTAAATCTCTTCAACAAGAAGCCTGAGAAGGGCAT  1625

Query 1263  CCAGTACCTCATCGAGCGTGGCTTTGTGCCCGACACGCCCGTCGGGGTGGCCCACTTCCTGCTGCAGCGCAAGG  1336
            ||||||.|||||.|||||.|||||.||||||||||||||.||.||.||||||||||||||||||||||||||||
Sbjct 1626  CCAGTATCTCATTGAGCGCGGCTTCGTGCCCGACACGCCAGTGGGAGTGGCCCACTTCCTGCTGCAGCGCAAGG  1699

Query 1337  GCCTCAGCCGGCAGATGATCGGCGAGTTCCTGGGCAACCGGCAGAAGCAGTTCAACCGTGACGTGCTCGACTGC  1410
            ||||||||||.|||||||||||.|||||||||||.||||||||||||||||||||||||||.|||||||||||.
Sbjct 1700  GCCTCAGCCGCCAGATGATCGGTGAGTTCCTGGGAAACCGGCAGAAGCAGTTCAACCGTGATGTGCTCGACTGT  1773

Query 1411  GTCGTGGACGAGATGGACTTCTCTACCATGGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGCACATCCGTGT  1484
            ||.|||||||||||||||||||||.||||||||||.|||||.||||||.||||.||||||||.||||||||.||
Sbjct 1774  GTTGTGGACGAGATGGACTTCTCTGCCATGGAGCTAGATGAAGCCCTCCGGAAGTTCCAGGCACACATCCGAGT  1847

Query 1485  CCAAGGGGAGGCTCAGAAAGTGGAGCGGCTCATAGAGGCGTTCAGCCAGCGCTACTGCATCTGCAACCCTGGGG  1558
            |||||||||||||||||||||||||||||||||.|||||.|||||||||||.|||||..||||||||||.||||
Sbjct 1848  CCAAGGGGAGGCTCAGAAAGTGGAGCGGCTCATCGAGGCATTCAGCCAGCGGTACTGTGTCTGCAACCCAGGGG  1921

Query 1559  TGGTGCGGCAATTCCGGAACCCAGACACCATTTTCATCCTGGCCTTCGCCATCATCCTGCTGAACACCGACATG  1632
            |||||||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||
Sbjct 1922  TGGTGCGACAGTTCCGGAACCCAGACACCATCTTCATCCTGGCCTTCGCCATCATCCTGCTCAACACAGACATG  1995

Query 1633  TACAGCCCCAATGTCAAGCCCGAGCGGAAAATGAAGCTAGAGGACTTCATCAAGAACCTCCGAGGTGTGGACGA  1706
            ||||||||||||||||||||.|||||.|||||||||||.||||||||..||||||||||||||||||||||.||
Sbjct 1996  TACAGCCCCAATGTCAAGCCAGAGCGCAAAATGAAGCTGGAGGACTTTGTCAAGAACCTCCGAGGTGTGGATGA  2069

Query 1707  TGGTGAGGACATTCCCCGTGAGATGCTGATGGGGATCTATGAACGGATCCGTAAGCGAGAGCTAAAGACCAATG  1780
            .|||||.|||||||||||.||||.|||.||.|||||||||||.||.||||||||||||||.||.||||||||.|
Sbjct 2070  CGGTGAAGACATTCCCCGGGAGACGCTAATTGGGATCTATGAGCGAATCCGTAAGCGAGAACTGAAGACCAACG  2143

Query 1781  AGGACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGCCGATCGGATCCCTGCATCCC  1854
            |||||||.||||||||||||||||||||.|||||||||||.|||||.||.||||||||.|||||||||||||..
Sbjct 2144  AGGACCACGTGTCCCAGGTGCAGAAGGTTGAGAAGCTCATCGTGGGCAAGAAGCCGATTGGATCCCTGCATCAT  2217

Query 1855  GGGCTCGGCTGTGTGCTCTCTCTGCCCCACCGTCGGTTGGTCTGCTACTGCCGGCTCTTTGAGGTTCCAGACCC  1928
            ||.||.|||||||||||.|||||.|||||.||.||..|.|||||||||||||||||.|||||.|||||.|||||
Sbjct 2218  GGTCTTGGCTGTGTGCTGTCTCTTCCCCATCGACGACTAGTCTGCTACTGCCGGCTTTTTGAAGTTCCTGACCC  2291

Query 1929  AAACAAGCCCCAGAAACTCGGACTACACCAGCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGTCACCAAGA  2002
            .|||||.||||||||.||.|||||||||||||||||.|||||||||||.||.||||||||||||||||||||||
Sbjct 2292  CAACAAACCCCAGAAGCTGGGACTACACCAGCGAGAGATCTTCCTGTTTAATGACCTCCTGGTGGTCACCAAGA  2365

Query 2003  TCTTCCAGAAGAAGAAGAACTCGGTGACGTACAGCTTCCGACAGTCCTTCTCCTTGTACGGCATGCAGGTCCTG  2076
            ||||||||||||||||||||||||||||.|||||||||||.||||||||||||.|.||||||||||||||||||
Sbjct 2366  TCTTCCAGAAGAAGAAGAACTCGGTGACATACAGCTTCCGGCAGTCCTTCTCCCTCTACGGCATGCAGGTCCTG  2439

Query 2077  CTCTTCGAGAACCAGTACTACCCCAATGGCATCCGGCTCACCTCGTCTGTCCCCGGAGCAGATATCAAAGTGTT  2150
            ||||||||||||||||||||.|||||||||||||||||.||.||..|||||||.||||||||.|||||||||.|
Sbjct 2440  CTCTTCGAGAACCAGTACTATCCCAATGGCATCCGGCTGACGTCTGCTGTCCCTGGAGCAGACATCAAAGTGCT  2513

Query 2151  AATAAACTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTCACCGATGACCTGCGGGAGTCCATTGCGGAAG  2224
            |||||||||||||||.|||||.|||||.|||||||||||.|||||.||.||||||||||||||..|.||.||||
Sbjct 2514  AATAAACTTCAACGCTCCCAATCCTCAGGACCGGAAGAAGTTCACTGACGACCTGCGGGAGTCTGTCGCTGAAG  2587

Query 2225  TCCAAGAGATGGAGAAGCACAGGATAGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCGGCCCAGCATGTCC  2298
            |.||||||||||||||.|||.|.|||||||||||||||||||||||||||||.||||||||||||||||||||.
Sbjct 2588  TGCAAGAGATGGAGAAACACCGAATAGAGTCGGAGCTCGAGAAGCAGAAAGGTGTCGTGCGGCCCAGCATGTCA  2661

Query 2299  CAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCGGGCCTGCCTGGACGACAGCTATGCCAG  2372
            ||||||||.|||||||||||||||||.||||||||.|||||||||.||||.||||||||.||||||||||||||
Sbjct 2662  CAGTGCTCCAGCCTCAAAAAGGAGTCAGGCAACGGGACACTGAGCAGGGCTTGCCTGGATGACAGCTATGCCAG  2735

Query 2373  CGGTGAGGGCCTCAAGCGCAGCGCCCTCAGCAGCTCCCTGCGGGACCTCTCGGAAGCCGGGG------------  2434
            .||.||||||||||||||||||||||||||||||||.|||.|.||||||||.|||| |||||            
Sbjct 2736  TGGCGAGGGCCTCAAGCGCAGCGCCCTCAGCAGCTCACTGAGAGACCTCTCAGAAG-CGGGGAAGCGAGGGCGT  2808

Query 2435  ---------------------------------------TCCATCAT---------------------------  2442
                                                   ||||||||                           
Sbjct 2809  CGCAGCAGTGCGGGATCGCTAGAGAGCAATGTGGAAGGCTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGC  2882

Query 2443  --------------------------------------------------------------------------  2442
                                                                                      
Sbjct 2883  GACCTCAACACGAGAGTGCCCATCTCGCCCCCCCCAGCCCGTGCCTAACTCCTCCTCTCTCCTGGGTTCTTTGT  2956

Query 2443  --------------------------------------------------------------------------  2442
                                                                                      
Sbjct 2957  TTGGGAGCAGGAGAGGGAAGCCCCCTCCCCAGGCCCACCCACCCTCAGCCCCTCCCCCAGCACCCCCTCACGCC  3030

Query 2443  --------------------------------------------------------------------------  2442
                                                                                      
Sbjct 3031  CATCACCCTGGGCCCTCAGAAGGCCCACTGCATGGACATCATGCACAGTACTGCCATGCACAGCAGAATCCTCC  3104

Query 2443  --------------------------------------------------------------------------  2442
                                                                                      
Sbjct 3105  GCCCTATCACCACCACCACCACTACCACCCACCCCCCCACCTGCAGCACACCCACCAGTACCACCATGGCCCAC  3178

Query 2443  --------------------------------------------------------------------------  2442
                                                                                      
Sbjct 3179  ACGGCGGGCACCCCCCGTATGGGGCCCATGCACACAGCCACCCGCCTCTGCCCACAGCTCACCCTGGTCATGCA  3252

Query 2443  --------------------------------------------------------------------------  2442
                                                                                      
Sbjct 3253  GGGCACTCAGCGCATCATCATGGGCAGCCCCCTGCCCCACCGCCCCCCACCAGCAGCAAGGCCAAGCCCAGCGG  3326

Query 2443  ----------------  2442
                            
Sbjct 3327  CATCAGCACAGTTGTG  3342