Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14034
Subject:
NM_001077192.3
Aligned Length:
1428
Identities:
1233
Gaps:
91

Alignment

Query    1  ATGGCAGAGCTGCAGATGTTACTAGAGGAGGAGATCCCGTCTGGCAAGAGGGCGCTGATCGAGAGTTACCAGAA  74
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct    1  ATGGCAGAGCTGCAGATGTTACTAGAGGAGGAGATCCCGTCTGGCAAGAGGGCGCTGATAGAGAGTTACCAGAA  74

Query   75  CCTGACTCGGGTGGCAGACTACTGTGAAAACAACTACATACAGGCTACAGACAAGAGAAAAGCTTTAGAGGAGA  148
            ||||||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||.||||.||||
Sbjct   75  CCTGACCCGGGTGGCGGACTACTGTGAAAACAACTATATACAGGCTACAGACAAGAGAAAAGCTCTAGAAGAGA  148

Query  149  CCAAAGCCTATACAACCCAATCTCTAGCTAGTGTTGCTTATCAAATAAATGCATTGGCCAACAATGTACTCCAG  222
            |||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  149  CCAAAGCATATACAACTCAATCTCTAGCTAGTGTTGCTTATCAAATAAATGCATTGGCCAACAATGTGCTCCAG  222

Query  223  TTGCTGGATATCCAAGCCTCTCAGCTTCGGAGAATGGAGTCTTCCATCAATCATATCTCACAGACTGTGGATAT  296
            .||||||||||||||||.||||||||.|||||.||||||||.|||||||||||.||||||||||||||||||||
Sbjct  223  CTGCTGGATATCCAAGCATCTCAGCTGCGGAGGATGGAGTCATCCATCAATCACATCTCACAGACTGTGGATAT  296

Query  297  TCATAAGGAGAAAGTGGCACGAAGAGAGATTGGTATTTTGACAACAAATAAGAATACATCAAGAACTCACAAAA  370
            ||||||.||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCATAAAGAAAAAGTGGCTCGAAGAGAGATTGGTATTTTGACAACAAATAAGAATACATCAAGAACTCACAAAA  370

Query  371  TAATAGCACCTGCGAATATGGAGCGCCCTGTAAGGTATATTCGGAAACCTATCGATTACACAGTTCTGGATGAT  444
            ||||.|||||.||.|||||||||||.|||||.|||||||||||||||||||||||.||.|||||||||||||||
Sbjct  371  TAATCGCACCCGCAAATATGGAGCGTCCTGTCAGGTATATTCGGAAACCTATCGACTATACAGTTCTGGATGAT  444

Query  445  GTGGGCCATGGTGTCAAGCATGGAAATAACCAGCCTGCAAGAACTGGCACACTGTCGAGAACAAATCCTCCTAC  518
            |||||||||||.||.|||||.||||||||||||||||||||||||||||||.|||||||||||||.|||||.||
Sbjct  445  GTGGGCCATGGAGTTAAGCACGGAAATAACCAGCCTGCAAGAACTGGCACATTGTCGAGAACAAACCCTCCCAC  518

Query  519  TCAGAAACCGCCAAGTCCTCCCATGTCAGGCCGGGGAACACTGGGACGGAATACTCCTTATAAAACCCTGGAAC  592
            .||||||||.|||||.||||||.||||.|||||.||.||..|||||||||||||.|||||.||||||||.||.|
Sbjct  519  GCAGAAACCACCAAGCCCTCCCGTGTCGGGCCGAGGGACTTTGGGACGGAATACCCCTTACAAAACCCTAGAGC  592

Query  593  CTGTTAAACCCCCAACAGTTCCTAATGACTATATGACCAGTCCTGCTAGGCTTGGAAGTCAGCATAGTCCAGGC  666
            |||||||.||.|||||||||||.||||||||.|||||.||||||||.|||||||||||.|||||||||||||||
Sbjct  593  CTGTTAAGCCTCCAACAGTTCCCAATGACTACATGACTAGTCCTGCGAGGCTTGGAAGCCAGCATAGTCCAGGC  666

Query  667  AGGACAGCATCTTTAAATCAGAGACCAAGGACACACAGTGGAAGTAGTGGAGGAAGTGGAAGTCGAGAAAACAG  740
            ||||||||.|||||||||||||||||||||||.||.||||||||||||||||||||.|||||.|||||.|||||
Sbjct  667  AGGACAGCTTCTTTAAATCAGAGACCAAGGACGCATAGTGGAAGTAGTGGAGGAAGCGGAAGCCGAGAGAACAG  740

Query  741  TGGTAGCAGTAGTATTGGCATTCCCATTGCTGTGCCTACACCTTCGCCACCCACTATTGGACCAGCAGCCCCGG  814
            |||.|||||.||.|||||||||||.||||||||||||||.||.||.||.||||||...||.|   |||||||.|
Sbjct  741  TGGGAGCAGCAGCATTGGCATTCCTATTGCTGTGCCTACGCCCTCACCGCCCACTGCGGGCC---CAGCCCCTG  811

Query  815  GCTCAGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAGATATCTCGACACAACTCTACTACTTCTTCGACA  888
            ||.||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||
Sbjct  812  GCGCAGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAGATTTCTCGACACAACTCTACCACTTCTTCGACA  885

Query  889  TCTTCTGGTGGATACAGACGAACTCCCTCTGTGACTGCTCAATTTTCTGCTCAGCCTCATGTTAATGGAGGTCC  962
            ||||||||||||||.|||||||||||.||||||.|.||.|||||.|||||||||||||||||||||||||||||
Sbjct  886  TCTTCTGGTGGATATAGACGAACTCCTTCTGTGGCCGCCCAATTCTCTGCTCAGCCTCATGTTAATGGAGGTCC  959

Query  963  ACTTTATTCTCAAAATTCAATTTCTATTGCTCCACCCCCTCCCCCTATGCCTCAGTTGACTCCACAGATACCTC  1036
            |||||||||||||||||||                                                       
Sbjct  960  ACTTTATTCTCAAAATTCA-------------------------------------------------------  978

Query 1037  TCACAGGCTTCGTGGCCAGGGTGCAGGAAAACATTGCTGATAGTCCAACTCCACCGCCACCACCTCCACCAGAT  1110
                                            |||||||||||.|||||||||||.|||||.||||||||||||
Sbjct  979  --------------------------------ATTGCTGATAGCCCAACTCCACCACCACCCCCTCCACCAGAT  1020

Query 1111  GACATTCCCATGTTTGATGACTCTCCACCTCCCCCACCACCACCACCAGTGGATTATGAAGATGAGGAGGCTGC  1184
            ||||||||||||||||||||||||||.|||||.||.|||||.||.||.|||||.||||||||||||||.|||||
Sbjct 1021  GACATTCCCATGTTTGATGACTCTCCGCCTCCTCCGCCACCTCCTCCTGTGGACTATGAAGATGAGGAAGCTGC  1094

Query 1185  AGTAGTTCAGTATAATGATCCATATGCAGATGGGGATCCTGCTTGGGCCCCCAAGAATTATATTGAGAAAGTTG  1258
            ||||||||||||||.|||.|||||||||||||||||.|||||.|||||.||||||||.||||||||||||||||
Sbjct 1095  AGTAGTTCAGTATAGTGACCCATATGCAGATGGGGACCCTGCATGGGCTCCCAAGAACTATATTGAGAAAGTTG  1168

Query 1259  TTGCAATATATGATTATACAAAAGACAAGGATGATGAGCTGTCATTTATGGAGGGTGCAATCATTTATGTTATA  1332
            |||||||||||||||||||||||||||||||||||||||||||.||||..||||||||||||||.|||||||||
Sbjct 1169  TTGCAATATATGATTATACAAAAGACAAGGATGATGAGCTGTCCTTTAAAGAGGGTGCAATCATCTATGTTATA  1242

Query 1333  AAGAAGAATGATGATGGCTGGTATGAAGGAGTCTGCAATCGAGTGACTGGTCTGTTCCCTGGGAACTATGTTGA  1406
            ||||||||||||||||||||||.|||||||||.|||||||||||||||||.||.||||||||||||||||||||
Sbjct 1243  AAGAAGAATGATGATGGCTGGTTTGAAGGAGTTTGCAATCGAGTGACTGGACTCTTCCCTGGGAACTATGTTGA  1316

Query 1407  ATCAATCATGCA-TATACTGAT  1427
            |||||||||||| |||||||||
Sbjct 1317  ATCAATCATGCACTATACTGAT  1338

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