Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14067
Subject:
XM_006499451.2
Aligned Length:
2854
Identities:
1421
Gaps:
1276

Alignment

Query    1  ATGGGAGTCCCGGCGTTCTTCCGCTGGCTCAGCCGCAAGTACCCGTCCATCATAGTCAACTGCGTGGAAGAGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GCCAAAAGAATGCAATGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGATGTGGAGTTTGATA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATCTGTATTTGGATATGAATGGAATCATCCATCCCTGTACTCATCCTGAAGACAAACCAGCACCAAAAAATGAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GATGAAATGATGGTTGCAATTTTTGAGTACATTGACAGACTTTTCAGTATTGTAAGACCAAGAAGACTTCTCTA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CATGGCAATAGATGGAGTGGCACCACGTGCTAAAATGAACCAGCAGCGTTCAAGGAGGTTCAGGGCATCAAAAG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AAGGAATGGAAGCAGCAGTCGAGAAGCAGCGAGTCAGGGAAGAAATATTGGCAAAAGGTGGCTTTCTTCCTCCA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GAAGAAATAAAAGAAAGATTTGACAGCAACTGTATTACACCAGGAACTGAATTCATGGACAATCTTGCTAAATG  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CCTTCGCTATTACATAGCTGATCGTTTAAATAATGACCCTGGGTGGAAAAATTTGACAGTTATTTTATCTGATG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  CTAGTGCTCCTGGTGAAGGAGAACATAAAATCATGGATTACATTAGAAGGCAAAGAGCCCAGCCTAACCATGAC  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  CCAAATACTCATCATTGTTTATGTGGAGCAGATGCTGATCTCATTATGCTTGGCCTTGCCACACATGAACCGAA  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  CTTTACCATTATTAGAGAAGAATTCAAACCAAACAAGCCCAAACCATGTGGTCTTTGTAATCAGTTTGGACATG  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  AGGTCAAAGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAAAGCATGATGAACTTGCCGATAGTCTTCCTTGT  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  GCAGAAGGAGAGTTTATCTTCCTTCGGCTTAATGTTCTTCGTGAGTATTTGGAAAGAGAACTCACAATGGCCAG  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  CCTACCATTCACATTTGATGTTGAGAGGAGCATTGATGACTGGGTTTTCATGTGCTTCTTTGTGGGAAATGACT  1036
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1037  TCCTCCCTCATTTGCCATCGTTAGAGATTAGGGAAAATGCAATTGACCGTTTGGTTAACATATACAAAAATGTG  1110
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1111  GTACACAAAACTGGGGGTTACCTTACAGAAAGTGGTTATGTCAATCTGCAAAGAGTACAGATGATCATGTTAGC  1184
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1185  AGTTGGTGAAGTTGAGGATAGCATTTTTAAAAAGAGAAAGGATGATGAGGACAGTTTTAGAAGACGACAGAAAG  1258
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1259  AAAAAAGAAAGAGAATGAAGAGAGATCAACCAGCTTTCACTCCTAGTGGAATATTAACTCCTCATGCCTTGGGT  1332
                          |||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct    1  --------------ATGAAGAGAGATCAACCAGCTTTTACTCCTAGTGGAATATTAACACCTCATGCCTTGGGT  60

Query 1333  TCAAGAAATTCACCAGGTTCTCAAGTAGCCAGTAATCCGAGACAAGCAGCCTATGAAATGAGGATGCAGAATAA  1406
            |||||||||||||||||||.||||||||||||||||||.|||||||||||||||||||||||||||||||..||
Sbjct   61  TCAAGAAATTCACCAGGTTGTCAAGTAGCCAGTAATCCAAGACAAGCAGCCTATGAAATGAGGATGCAGAGAAA  134

Query 1407  CTCTAGTCCTTCGATATCTCCTAATACGAGTTTCACATCTGATGGCTCCCCGTCTCCATTAGGAGGAATTAAGC  1480
            ||||||||||||.||||||||||||||.|||||..||||||||||||||||.||||||.||||||||||||||.
Sbjct  135  CTCTAGTCCTTCAATATCTCCTAATACAAGTTTTGCATCTGATGGCTCCCCATCTCCACTAGGAGGAATTAAGA  208

Query 1481  GAAAAGCAGAAGACAGTGACAGTGAACCTGAGCCAGAGGATAATGTCAGGTTATGGGAAGCTGGCTGGAAGCAG  1554
            |||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||.
Sbjct  209  GAAAAGCAGAAGACAGTGACAGTGAGCCAGAGCCAGAGGATAACGTCAGGTTATGGGAAGCTGGTTGGAAGCAA  282

Query 1555  CGGTACTACAAGAACAAATTTGATGTGGATGCAGCTGATGAGAAATTCCGTCGGAAAGTTGTGCAGTCGTACGT  1628
            ||.|||||||||||||||||||||||.|||||||||||||||||||||||.||.||.|||||.|||||.|||||
Sbjct  283  CGATACTACAAGAACAAATTTGATGTAGATGCAGCTGATGAGAAATTCCGACGTAAGGTTGTTCAGTCCTACGT  356

Query 1629  TGAAGGACTTTGCTGGGTTCTTAGATATTATTACCAGGGCTGTGCTTCCTGGAAGTGGTATTATCCATTTCATT  1702
            |||||||||.||||||||||||.|.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  357  TGAAGGACTGTGCTGGGTTCTTCGCTATTATTACCAGGGCTGTGCTTCCTGGAAGTGGTATTATCCATTCCATT  430

Query 1703  ATGCACCATTTGCTTCAGACTTTGAAGGCATTGCAGACATGCCATCTGATTTTGAGAAGGGTACGAAACCGTTT  1776
            |||||||||||||.||||||||||||||.||||||||||||.|.|||||.|||||.|||||.||.|||||||||
Sbjct  431  ATGCACCATTTGCCTCAGACTTTGAAGGTATTGCAGACATGTCCTCTGAATTTGAAAAGGGCACAAAACCGTTT  504

Query 1777  AAACCACTAGAACAACTTATGGGGGTATTTCCAGCTGCAAGTGGTAATTTTCTACCTCCATCATGGCGGAAGCT  1850
            ||.|||||.||||||||.||||||||.||.|||||||||||||||||.||||||||||||.|||||||||||||
Sbjct  505  AAGCCACTGGAACAACTAATGGGGGTTTTCCCAGCTGCAAGTGGTAACTTTCTACCTCCAACATGGCGGAAGCT  578

Query 1851  CATGAGTGATCCTGATTCTAGTATAATTGACTTCTATCCTGAAGATTTTGCTATTGATTTGAATGGGAAGAAAT  1924
            |||||||||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  579  CATGAGTGACCCTGATTCCAGTATAATTGACTTCTATCCTGAAGATTTTGCTATTGATTTGAATGGGAAGAAAT  652

Query 1925  ATGCATGGCAAGGTGTTGCTCTCTTGCCATTCGTGGATGAGCGAAGGCTACGAGCTGCCCTAGAAGAGGTATAC  1998
            ||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||.|||||||||||.|||
Sbjct  653  ATGCATGGCAAGGTGTTGCTCTATTGCCATTTGTGGATGAGCGAAGGCTGCGAGCGGCTCTAGAAGAGGTGTAC  726

Query 1999  CCAGACCTCACTCCAGAAGAGACCAGAAGAAACAGCCTTGGAGGTGATGTCTTATTTGTGGGGAAACATCACCC  2072
            ||||||||||||||||||||||.|||.|||||.||.||||||||||||||.||.||||||||.||||.|||.||
Sbjct  727  CCAGACCTCACTCCAGAAGAGAACAGGAGAAATAGTCTTGGAGGTGATGTTTTGTTTGTGGGAAAACTTCATCC  800

Query 2073  ACTCCATGACTTCATTTTAGAGCTGTACCAGACAGGTTCCACAGAGCCAGTGGAGGTACCCCCTGAACTATGTC  2146
            |||.|..||||||||||||||||||||.|||||.|||||||||||||||||.||.||.||.||||||.|.||||
Sbjct  801  ACTACGCGACTTCATTTTAGAGCTGTATCAGACGGGTTCCACAGAGCCAGTTGATGTGCCACCTGAATTGTGTC  874

Query 2147  ATGGGATTCAAGGAAAGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGATCAAAATAGTATGTTCTCCTGTTCC  2220
            |.|||||||||||.|.||||||||||||||||||||||||||||||||| |.|||.|||||||||.|||||.||
Sbjct  875  ACGGGATTCAAGGGACGTTTTCTTTGGATGAAGAAGCCATTCTTCCAGA-CCAAACAGTATGTTCCCCTGTGCC  947

Query 2221  TATGTTAAGGGATCTGACACAGAACACTGTAGTCAGTATTAATTTTAAAGACCCACAGTTTGCTGAAGATTACA  2294
            .|||||..||||.||||||||||||||||.|||||||||||||||||||||.||||||||||||||||||||..
Sbjct  948  CATGTTGCGGGACCTGACACAGAACACTGCAGTCAGTATTAATTTTAAAGATCCACAGTTTGCTGAAGATTATG  1021

Query 2295  TTTTTAAAGCTGTAATGCTTCCAGGAGCAAGAAAGCCAGCAGCAGTACTGAAACCTAGTGACTGGGAAAAATCC  2368
            ||||||||||||.||||||||||||||||||||||||||||.||||.|||||||||.|||||||||||||||||
Sbjct 1022  TTTTTAAAGCTGCAATGCTTCCAGGAGCAAGAAAGCCAGCAACAGTTCTGAAACCTGGTGACTGGGAAAAATCC  1095

Query 2369  AGCAATGGACGGCAGTGGAAGCCTCAGCTTGGCTTTAACCGTGACCGGAGGCCTGTGCACCTGGATCAGGCAGC  2442
            ||||||||.|||||.|||||.||||||||||||||||||||.||||||.|||||||.||||||||.||||||||
Sbjct 1096  AGCAATGGGCGGCAATGGAAACCTCAGCTTGGCTTTAACCGGGACCGGCGGCCTGTTCACCTGGACCAGGCAGC  1169

Query 2443  CTTCAGGACTTTGGGCCATGTGATGCCAAGAGGCTCAGGAACTGGCATTTACAGCAATGCTGCACCACCACCTG  2516
            |||.||.|||||.||||||||.|..|||||||||||.||.||..|..||||.|..||..||||||.||||||||
Sbjct 1170  CTTTAGAACTTTAGGCCATGTTACACCAAGAGGCTCGGGGACGAGTGTTTATACGAACACTGCACTACCACCTG  1243

Query 2517  TGACTTACCAGGGAAACTTATACAGGCCGCTTTTGAGAGGACAAGCCCAGATTCCAAAACTTATGTCAAATATG  2590
            ..|.|||||||||.|||...||||||||.||..|||||||.|||||.|||||.|||||||||||||||||||||
Sbjct 1244  CCAATTACCAGGGGAACAATTACAGGCCACTGCTGAGAGGTCAAGCTCAGATCCCAAAACTTATGTCAAATATG  1317

Query 2591  AGGCCCCAGGATTCCTGGCGAGGTCCTCCTCCCCTTTTCCAGCAGCAAAGGTTTGACAGAGGCGTTGGGGCTGA  2664
            ||||||||.||||||||||||||.||||||||.||||||||||||||.||.|||||.|||.|.|||||.|||||
Sbjct 1318  AGGCCCCAAGATTCCTGGCGAGGCCCTCCTCCTCTTTTCCAGCAGCATAGATTTGAGAGAAGTGTTGGAGCTGA  1391

Query 2665  ACCTCTGCTCCCATGGAACCGGATGCTGCAAACCCAGAATGCAGCCTTCCAGCCAAACCAGTACCAGATGCTAG  2738
            ||||||.||.|||||||||||||||.|.||||.|||.|||||||||||.||||||||.||||||||||||||||
Sbjct 1392  ACCTCTACTGCCATGGAACCGGATGATCCAAAACCAAAATGCAGCCTTTCAGCCAAATCAGTACCAGATGCTAG  1465

Query 2739  CTGGGCCTGGTGGGTATCCACCCAGACGAGATGAT---CGTGGAGGGAGACAGGGATATCCCAGAGAAGGAAGG  2809
            ..||.|||||.||.||||||||||||||.||.|||   ||.||||||||||||||||||||||||||||||.||
Sbjct 1466  GAGGACCTGGAGGCTATCCACCCAGACGTGACGATCACCGAGGAGGGAGACAGGGATATCCCAGAGAAGGACGG  1539

Query 2810  AAATACCCTTTGCCACCACCCTCAGGAAGATACAATTGGAAT  2851
            |||||||||||||||||||||||.||||||||||.|||||||
Sbjct 1540  AAATACCCTTTGCCACCACCCTCGGGAAGATACAGTTGGAAT  1581

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