Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14067
- Subject:
- XM_017027722.1
- Aligned Length:
- 3103
- Identities:
- 1535
- Gaps:
- 1546
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGCTCCGCCGCCTGCCCCCGGGGAGCCTTGCCGGAGCTCGCGCCCTGCTGCCAGCCTCGCGAGCAGTCGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCCCACACGCGATGGGACGCGGGCTGTGGGATTCAGCACCCCGGGGGCGAGGAATTCAGGACCCTCGGCGGGG 148
Query 1 ---------ATGGGAGTCCC--------------GGCGTTCTTCC---GCTGGCT---------CAGCCGCAAG 39
||.|| ||.|| |.||.||.||| .||.||| || |||.|||
Sbjct 149 CAAGGGCCTATAGG-GTTCCGAACTCGCAGGAGGGTCGCTCCTCCCCTACTCGCTTTTTCCCGGCA-CCGGAAG 220
Query 40 TACCCGTCCA----------TCATAGTCA-ACTGCG------------TGGAAGAG------------------ 72
..||||.||| ||.|...|| ||.||| .|||||||
Sbjct 221 GCCCCGCCCACTGCTTTGTTTCCTCTCCAGACCGCGCATTTTGGGTCTCGGAAGAGGTTCAGAGGCTGTTGTTG 294
Query 73 ------------AAGCCAAAAGAATGCAATGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGA 134
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 AGCAATGCATGCCAGCCAAAAGAATGCAATGGTGTAAAGATTCCAGTTGATGCCAGTAAACCTAATCCAAATGA 368
Query 135 TGTGGAGTTTGATAATCTGTATTTGGATATGAATGGAATCATCCATCCCTGTACTCATCCTGAAGACAAACCAG 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 TGTGGAGTTTGATAATCTGTATTTGGATATGAATGGAATCATCCATCCCTGTACTCATCCTGAAGACAAACCAG 442
Query 209 CACCAAAAAATGAAGATGAAATGATGGTTGCAATTTTTGAGTACATTGACAGACTTTTCAGTATTGTAAGACCA 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 CACCAAAAAATGAAGATGAAATGATGGTTGCAATTTTTGAGTACATTGACAGACTTTTCAGTATTGTAAGACCA 516
Query 283 AGAAGACTTCTCTACATGGCAATAGATGGAGTGGCACCACGTGCTAAAATGAACCAGCAGCGTTCAAGGAGGTT 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 AGAAGACTTCTCTACATGGCAATAGATGGAGTGGCACCACGTGCTAAAATGAACCAGCAGCGTTCAAGGAGGTT 590
Query 357 CAGGGCATCAAAAGAAGGAATGGAAGCAGCAGTCGAGAAGCAGCGAGTCAGGGAAGAAATATTGGCAAAAGGTG 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 CAGGGCATCAAAAGAAGGAATGGAAGCAGCAGTCGAGAAGCAGCGAGTCAGGGAAGAAATATTGGCAAAAGGTG 664
Query 431 GCTTTCTTCCTCCAGAAGAAATAAAAGAAAGATTTGACAGCAACTGTATTACACCAGGAACTGAATTCATGGAC 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 GCTTTCTTCCTCCAGAAGAAATAAAAGAAAGATTTGACAGCAACTGTATTACACCAGGAACTGAATTCATGGAC 738
Query 505 AATCTTGCTAAATGCCTTCGCTATTACATAGCTGATCGTTTAAATAATGACCCTGGGTGGAAAAATTTGACAGT 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 AATCTTGCTAAATGCCTTCGCTATTACATAGCTGATCGTTTAAATAATGACCCTGGGTGGAAAAATTTGACAGT 812
Query 579 TATTTTATCTGATGCTAGTGCTCCTGGTGAAGGAGAACATAAAATCATGGATTACATTAGAAGGCAAAGAGCCC 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 TATTTTATCTGATGCTAGTGCTCCTGGTGAAGGAGAACATAAAATCATGGATTACATTAGAAGGCAAAGAGCCC 886
Query 653 AGCCTAACCATGACCCAAATACTCATCATTGTTTATGTGGAGCAGATGCTGATCTCATTATGCTTGGCCTTGCC 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 AGCCTAACCATGACCCAAATACTCATCATTGTTTATGTGGAGCAGATGCTGATCTCATTATGCTTGGCCTTGCC 960
Query 727 ACACATGAACCGAACTTTACCATTATTAGAGAAGAATTCAAACCAAACAAGCCCAAACCATGTGGTCTTTGTAA 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 ACACATGAACCGAACTTTACCATTATTAGAGAAGAATTCAAACCAAACAAGCCCAAACCATGTGGTCTTTGTAA 1034
Query 801 TCAGTTTGGACATGAGGTCAAAGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAAAGCATGATGAACTTGCCG 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 TCAGTTTGGACATGAGGTCAAAGATTGTGAAGGTTTGCCAAGAGAAAAGAAGGGAAAGCATGATGAACTTGCCG 1108
Query 875 ATAGTCTTCCTTGTGCAGAAGGAGAGTTTATCTTCCTTCGGCTTAATGTTCTTCGTGAGTATTTGGAAAGAGAA 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 ATAGTCTTCCTTGTGCAGAAGGAGAGTTTATCTTCCTTCGGCTTAATGTTCTTCGTGAGTATTTGGAAAGAGAA 1182
Query 949 CTCACAATGGCCAGCCTACCATTCACATTTGATGTTGAGAGGAGCATTGATGACTGGGTTTTCATGTGCTTCTT 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 CTCACAATGGCCAGCCTACCATTCACATTTGATGTTGAGAGGAGCATTGATGACTGGGTTTTCATGTGCTTCTT 1256
Query 1023 TGTGGGAAATGACTTCCTCCCTCATTTGCCATCGTTAGAGATTAGGGAAAATGCAATTGACCGTTTGGTTAACA 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 TGTGGGAAATGACTTCCTCCCTCATTTGCCATCGTTAGAGATTAGGGAAAATGCAATTGACCGTTTGGTTAACA 1330
Query 1097 TATACAAAAATGTGGTACACAAAACTGGGGGTTACCTTACAGAAAGTGGTTATGTCAATCTGCAAAGAGTACAG 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 TATACAAAAATGTGGTACACAAAACTGGGGGTTACCTTACAGAAAGTGGTTATGTCAATCTGCAAAGAGTACAG 1404
Query 1171 ATGATCATGTTAGCAGTTGGTGAAGTTGAGGATAGCATTTTTAAAAAGAGAAAGGATGATGAGGACAGTTTTAG 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405 ATGATCATGTTAGCAGTTGGTGAAGTTGAGGATAGCATTTTTAAAAAGAGAAAGGATGATGAGGACAGTTTTAG 1478
Query 1245 AAGACGACAGAAAGAAAAAAGAAAGAGAATGAAGAGAGATCAACCAGCTTTCACTCCTAGTGGAATATTAACTC 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1479 AAGACGACAGAAAGAAAAAAGAAAGAGAATGAAGAGAGATCAACCAGCTTTCACTCCTAGTGGAATATTAACTC 1552
Query 1319 CTCATGCCTTGGGTTCAAGAAATTCACCAGGTTCTCAAGTAGCCAGTAATCCGAGACAAGCAGCCTATGAAATG 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1553 CTCATGCCTTGGGTTCAAGAAATTCACCAGGTTCTCAAGTAGCCAGTAATCCGAGACAAGCAGCCTATGAAATG 1626
Query 1393 AGGATGCAGAATAACTCTAGTCCTTCGATATCTCCTAATACGAGTTTCACATCTGATGGCTCCCCGTCTCCATT 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1627 AGGATGCAGAATAACTCTAGTCCTTCGATATCTCCTAATACGAGTTTCACATCTGATGGCTCCCCGTCTCCATT 1700
Query 1467 AGGAGGAATTAAGCGAAAAGCAGAAGACAGTGACAGTGAACCTGAGCCAGAGGATAATGTCAG----------- 1529
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1701 AGGAGGAATTAAGCGAAAAGCAGAAGACAGTGACAGTGAACCTGAGCCAGAGGATAATGTCAGCCATCAACAAC 1774
Query 1530 -GTTATGGGAAGCTGGCTGGAAGCAGCGGTACTA----CAAGAACAAATTTGATGTGGATGCAGCTGATGAGAA 1598
.||| ||||.||| ||.|.|| | |||| ||| |||
Sbjct 1775 TCTTA----------GCTGAAAG-AGGGATA--AGGCCCAAG--CAA---------GGA--------------- 1809
Query 1599 ATTCCGTCGGAAAGTTGTGCAGTCGTACGTTGAAGGACTTTGCTGGGTTCTTAGATATTATTACCAGGGCTGTG 1672
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 1673 CTTCCTGGAAGTGGTATTATCCATTTCATTATGCACCATTTGCTTCAGACTTTGAAGGCATTGCAGACATGCCA 1746
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 1747 TCTGATTTTGAGAAGGGTACGAAACCGTTTAAACCACTAGAACAACTTATGGGGGTATTTCCAGCTGCAAGTGG 1820
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 1821 TAATTTTCTACCTCCATCATGGCGGAAGCTCATGAGTGATCCTGATTCTAGTATAATTGACTTCTATCCTGAAG 1894
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 1895 ATTTTGCTATTGATTTGAATGGGAAGAAATATGCATGGCAAGGTGTTGCTCTCTTGCCATTCGTGGATGAGCGA 1968
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 1969 AGGCTACGAGCTGCCCTAGAAGAGGTATACCCAGACCTCACTCCAGAAGAGACCAGAAGAAACAGCCTTGGAGG 2042
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2043 TGATGTCTTATTTGTGGGGAAACATCACCCACTCCATGACTTCATTTTAGAGCTGTACCAGACAGGTTCCACAG 2116
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2117 AGCCAGTGGAGGTACCCCCTGAACTATGTCATGGGATTCAAGGAAAGTTTTCTTTGGATGAAGAAGCCATTCTT 2190
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2191 CCAGATCAAAATAGTATGTTCTCCTGTTCCTATGTTAAGGGATCTGACACAGAACACTGTAGTCAGTATTAATT 2264
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2265 TTAAAGACCCACAGTTTGCTGAAGATTACATTTTTAAAGCTGTAATGCTTCCAGGAGCAAGAAAGCCAGCAGCA 2338
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2339 GTACTGAAACCTAGTGACTGGGAAAAATCCAGCAATGGACGGCAGTGGAAGCCTCAGCTTGGCTTTAACCGTGA 2412
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2413 CCGGAGGCCTGTGCACCTGGATCAGGCAGCCTTCAGGACTTTGGGCCATGTGATGCCAAGAGGCTCAGGAACTG 2486
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2487 GCATTTACAGCAATGCTGCACCACCACCTGTGACTTACCAGGGAAACTTATACAGGCCGCTTTTGAGAGGACAA 2560
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2561 GCCCAGATTCCAAAACTTATGTCAAATATGAGGCCCCAGGATTCCTGGCGAGGTCCTCCTCCCCTTTTCCAGCA 2634
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2635 GCAAAGGTTTGACAGAGGCGTTGGGGCTGAACCTCTGCTCCCATGGAACCGGATGCTGCAAACCCAGAATGCAG 2708
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2709 CCTTCCAGCCAAACCAGTACCAGATGCTAGCTGGGCCTGGTGGGTATCCACCCAGACGAGATGATCGTGGAGGG 2782
Sbjct 1810 -------------------------------------------------------------------------- 1809
Query 2783 AGACAGGGATATCCCAGAGAAGGAAGGAAATACCCTTTGCCACCACCCTCAGGAAGATACAATTGGAAT 2851
Sbjct 1810 --------------------------------------------------------------------- 1809
