Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14073
- Subject:
- XR_930485.2
- Aligned Length:
- 1676
- Identities:
- 1158
- Gaps:
- 508
Alignment
Query 1 ------------------------------AT-GGGAAGTCGGATTTTCTTACTCCCAAGGCTATCGCCAACAG 43
|| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTCCAGAAAGTGATCGCTGCCGTGGTCGCCATGGGGAAGTCGGATTTTCTTACTCCCAAGGCTATCGCCAACAG 74
Query 44 GATCAAGTCCAAGGGGCTGCAGAAGCTACGCTGGTATTGCCAGATGTGCCAGAAGCAGTGCCGGGACGAGAATG 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GATCAAGTCCAAGGGGCTGCAGAAGCTACGCTGGTATTGCCAGATGTGCCAGAAGCAGTGCCGGGACGAGAATG 148
Query 118 GCTTTAAGTGTCATTGTATGTCCGAATCTCATCAGAGACAACTATTGCTGGCTTCAGAAAATCCTCAGCAGTTT 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTTTAAGTGTCATTGTATGTCCGAATCTCATCAGAGACAACTATTGCTGGCTTCAGAAAATCCTCAGCAGTTT 222
Query 192 ATGGATTATTTTTCAGAGGAATTCCGAAATGACTTTCTAGAACTTCTCAGGAGACGCTTTGGCACTAAAAGGGT 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATGGATTATTTTTCAGAGGAATTCCGAAATGACTTTCTAGAACTTCTCAGGAGACGCTTTGGCACTAAAAGGGT 296
Query 266 CCACAACAACATTGTCTACAACGAATACATCAGCCACCGAGAGCACATCCACATGAATGCCACTCAGTGGGAAA 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCACAACAACATTGTCTACAACGAATACATCAGCCACCGAGAGCACATCCACATGAATGCCACTCAGTGGGAAA 370
Query 340 CTCTGACTGATTTTACTAAGTGGCTGGGCAGAGAAGGCTTGTGCAAAGTGGACGAGACACCAAAAGGCTGGTAT 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCTGACTGATTTTACTAAGTGGCTGGGCAGAGAAGGCTTGTGCAAAGTGGACGAGACACCAAAAGGCTGGTAT 444
Query 414 ATTCAGTACATAGACAGGGACCCAGAAACTATCCGCCGGCAACTGGAACTGGAGAAAAAGAAAAAGCAGGACCT 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTCAGTACATAGACAGGGACCCAGAAACTATCCGCCGGCAACTGGAACTGGAGAAAAAGAAAAAGCAGGACCT 518
Query 488 TGATGATGAAGAAAAAACTGCCAAATTTATTGAAGAGCAAGTGAGAAGAGGCCTGGAAGGGAAGGAACAGGAGG 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGATGATGAAGAAAAAACTGCCAAATTTATTGAAGAGCAAGTGAGAAGAGGCCTGGAAGGGAAGGAACAGGAGG 592
Query 562 TCCCTACTTTTACGGAATTAAGCAGAGAAAATGATGAAGAGAAAGTCACGTTTAATTTGAGTAAAGGAGCATGT 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCCTACTTTTACGGAATTAAGCAGAGAAAATGATGAAGAGAAAGTCACGTTTAATTTGAGTAAAGGAGCATGT 666
Query 636 AGCTCATCCGGAGCAACATCTTCCAAGTCAAGTACTCTGGGACCGAGTGCACTGAAGACGATAGGAAGTTCAGC 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCTCATCCGGAGCAACATCTTCCAAGTCAAGTACTCTGGGACCGAGTGCACTGAAGACGATAGGAAGTTCAGC 740
Query 710 ATCAGTGAAACGAAAAGAATCTTCCCAGAGCTCAACTCAGTCTAAAGAAAAGAAGAAAAAGAAATCTGCACTGG 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCAGTGAAACGAAAAGAATCTTCCCAGAGCTCAACTCAGTCTAAAGAAAAGAAGAAAAAGAAATCTGCACTGG 814
Query 784 ATGAAATCATGGAGATTGAAGAGGAAAAGAAAAGAACTGCCCGAACAGACTACTGGCTACAGCCTGAAATTATT 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATGAAATCATGGAGATTGAAGAGGAAAAGAAAAGAACTGCCCGAACAGACTACTGGCTACAGCCTGAAATTATT 888
Query 858 GTGAAAATTATAACCAAGAAACTGGGAGAGAAATATCATAAGAAAAAGGCTATTGTTAAGGAAGTAATTGACAA 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTGAAAATTATAACCAAGAAACTGGGAGAGAAATATCATAAGAAAAAGGCTATTGTTAAGGAAGTAATTGACAA 962
Query 932 ATATACAGCTGTTGTGAAGATGATTGATTCTGGAGACAAGCTGAAACTTGACCAGACTCATTTAGAGACAGTAA 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATATACAGCTGTTGTGAAGATGATTGATTCTGGAGACAAGCTGAAACTTGACCAGACTCATTTAGAGACAGTAA 1036
Query 1006 TTCCAGCACCAGGAAAAAGAATTCTAGTTTTAAATGGAGGCTACAGAGGAAATGAAGGTACCCTAGAATCCATC 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTCCAGCACCAGGAAAAAGAATTCTAGTTTTAAATGGAGGCTACAGAGGAAATGAAGGTACCCTAGAATCCATC 1110
Query 1080 AATGAGAAGACTTTTTCAGCTACTATCGTCATTGAAACTG-----GC--CCTTTAAAAGGACG------CAGAG 1140
|||||||||||||||||||||||||||||||||||||||| || || ||| |.|||
Sbjct 1111 AATGAGAAGACTTTTTCAGCTACTATCGTCATTGAAACTGTGTGAGCTACC---------ACGCCTTGCCTGAG 1175
Query 1141 TTGA--------AGGAATTCA---------------ATATGAAGA----CATTTCTAAACTTGCC--------- 1178
|||| |.||.|||| |||..|.|| ||.||| ||||.||..
Sbjct 1176 TTGATCTTCTACAAGAGTTCAAACAAAAAACAGACCATACCAGGATGATCACTTC-AAACATGAGGATGGGTAT 1248
Query 1179 -------------------------------------------------------------------------- 1178
Sbjct 1249 AAGCTGACGTCAGACACAGCAGGGTTGATGGGAGACCTACAGAAAATACATATAAATCATCAGACATGAAGTCC 1322
Query 1179 -------------------------------------------------------------------------- 1178
Sbjct 1323 AGCACATAGTAGGTATTGAATAAATGGCAGTGAGTGGTCATGTCCAGAAATGAAGCCAAGAAGTTGAGCCTGGA 1396
Query 1179 -------------------------------------------------------------------------- 1178
Sbjct 1397 CTACTAAGAATCTGGTCTGAAGAATTTCAAAAAGGAGAATGGTTCTCCCTGATAACAAATAGTGATGAGTAAAA 1470
Query 1179 -------------------------------------------------------------------------- 1178
Sbjct 1471 CCAGACAAATTACATATGCCTCCCCCAAGTATGTACGTTTGGAATCAACTTGGTGGTTTTCTTCAGAGAAAAAA 1544
Query 1179 -------------------------------------------------------------------------- 1178
Sbjct 1545 TGTTTCATGTCTGCCTCCCACATTTAATTCTCCAACGTCTTTCTGAAATTATTTCAGAATGAAATGAGGCAGCA 1618
Query 1179 ------------------------------------------------ 1178
Sbjct 1619 TACTTGAGGTTAAATTCAATAAAAAATATCTGAAGCATAAAAATACGA 1666
