Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14113
Subject:
NR_146936.2
Aligned Length:
2791
Identities:
407
Gaps:
2382

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGTTGTATGCCATAGCTCTGTAACATGAACAGTGTTTCCAATAAACTGTCCACCGCAAAACCCGTTAAAAAATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGTGAGCTCCATGAGCTGAGGAGCTAGCAGATTGCCGGGATTACAAAGACAACGAGACAGGACCCTTTCCTTAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGATTTACAATCTCTCTTTTAAGAGCCTGTGCCGATGGAGGTGCCAACCGCTTATATGATATCACCGAAGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGAGAGAAAGATTCCTCTGACAGTATCCTCCAAGACCTGACATGGACAATGTGTGAAAAAGCGCTCAACCTCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACTTGAAACTCTCCTCGAGGCCCCCAGCCACCAGTCATCTCATCAGGACACCGAAAGACACCCATTACTGTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGCTTCCAAGGGTCTTGGCAACTCTTTTATCGGAAACGAGAGCTTTTTGCCTGAATTCATCAATGGAGACTTTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATTCTATTAGGCCTGAAGTCAGAGAATACTATGCTACTAAGGGATGTGAGCTCATTTCAACTCCTGATCAAGAC  518

Query    1  ---------------------------ATGCTCCAAAAGA--GTAGAAGAAGAAGACTTAAA------------  33
                                       |||||||||||||  .||||||||.||||||||||            
Sbjct  519  CACACTGACTTTACTAAGTGCCTTAAAATGCTCCAAAAGAAGATAGAAGAAAAAGACTTAAAGAAGAAACAGTG  592

Query   34  --------------------------------------------------------------------------  33
                                                                                      
Sbjct  593  AAAGGAATACTGTTCAATTCCAACATCAGCTGTGTAACCGAGGCATCGTAATACTTTTATGACAAGTTTCACTA  666

Query   34  ------------------------------------GGTTGATGTGATCGTGACACTGGGAGGCCTTGCTGGGC  71
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCTTTTTGCCTGTGCCAGTGTACCTCAAAGGGATATGGTTGATGTGATCGTGACACTGGGAGGCCTTGCTGGGC  740

Query   72  GTTTTGACCAGATTATGGCATCTGTGAATACCTTGTTCCAAGCGACTCACATCACTCCTTTTCCAATTATAATA  145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTTTTGACCAGATTATGGCATCTGTGAATACCTTGTTCCAAGCGACTCACATCACTCCTTTTCCAATTATAATA  814

Query  146  ATCCAAGAGGAATCGCTGATCTACCTGCTCCAACCAGGAAAGCACAGGTTGCATGTAGACACTGGAATGGAGGG  219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCCAAGAGGAATCGCTGATCTACCTGCTCCAACCAGGAAAGCACAGGTTGCATGTAGACACTGGAATGGAGGG  888

Query  220  TGATTGGTGTGGCCTTATTCCTGTTGGACAGCCTTGTATGCAGGTTACAACCACAGGCCTCAAGTGGAACCTCA  293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGATTGGTGTGGCCTTATTCCTGTTGGACAGCCTTGTATGCAGGTTACAACCACAGGCCTCAAGTGGAACCTCA  962

Query  294  --------------------------------------------------------------------------  293
                                                                                      
Sbjct  963  GAACTTGTGACTACACTAGGACCACCTGGATAGCCAAGGATAATCCCGTCCCAAGACTAATCAGATTAATCAGA  1036

Query  294  --------------------------------CAAATGATGTGCTTGCTTTTGGAACATTGGTCAGTACTTCCA  335
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTTAATCACATCTGTAAAGTTCCTCTTGCCATCAAATGATGTGCTTGCTTTTGGAACATTGGTCAGTACTTCCA  1110

Query  336  ATACCTACGACGGGTCTGGTGTTGTGACTGTGGAAACTGACCACCCACTCCTCTGGACCATGGCCATCAAAAGC  409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATACCTACGACGGGTCTGGTGTTGTGACTGTGGAAACTGACCACCCACTCCTCTGGACCATGGCCATCAAAAGC  1184

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1185  TAACCTGTTGACTGGCATCCATAAGTGTGCCTCTGCCTTATCTCATTTCTCAACAGTTCATTGCTCAACAAGAA  1258

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1259  CGATTCACCTGGGTTTGCAAGAATCTAAACCTCTCTAGGGGAAGCCCACTGGGTTTAAAGATGTTAGTGTTTAG  1332

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1333  ATAATACAGGTAACATTATAAATGACAGATCTCAATTTTATAGTAGTGGGAAAGATACATGCTAAGAAAGCAAA  1406

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1407  TAAGCTCTATTATATTCGGTTGGAACCTAATGGGAATCATTCCACTATACAATTCAGTACTGATTATTCTTCTT  1480

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1481  ACATTATTAATCATTCCATTTATCCTAGAAAATTGTTTTTAATTTGAATCAGAGAAAACTGTTGAGGTTCCTCT  1554

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1555  TGGAGTCTAGAACATCCTTAAATGTCTAACAACAAGGGCTACCTCTGAGTACCTTTTAGTATTAGTTTTCTGTA  1628

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1629  TATGATATATATTATCTTATACTGAAAAAAAATTCCTTTCAGATTGGGGTGTTAGAAGTGCACCAGGTCACTCT  1702

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1703  GACCTTATTACTGTCTTTGGTATTGTCTTAAATAAATCAAGAATCATTGACCTAATTGTTAAATTTAAAAATAG  1776

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1777  GTAGTTAGCAATAGGTGGAAAGAGAAATGATGTGAAAGATAAATGATGATTCGTGGAGCCCTACTCACACATTA  1850

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1851  ACCCCCAAATTCAAAAGTAAGAATGCAAAAGTCTAGAGGGGGTAACAGTCTGCATCATCATCACAACCTAAATG  1924

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1925  GAGAAAGCTGTGCAGAGGAAACTTAAGCATAAAAATTGAATTCGTTTCTGACATACCTTAGACTGAAAAACTGT  1998

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 1999  TGGTTCATCCAGAAGTGTATTCATATTACCAGAAAATGAGTTTGTCTATGGGGATACATGAACTTCATATACTA  2072

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2073  AGGAGCCTAACTCCAAAGCCTGCGTTCTCATCCCAGTCTGATATTCACCTAAGTTTCCGGACCCTTTTCCTTAG  2146

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2147  CTGTAAAATGGAAGCGGTTGGACTGATGGTGTCTGAGGTTCTTTCCCACACTGAAATTCTAAATATTGACACTT  2220

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2221  AGCAGTCATAGGGCTGATAATACACACAGTTACTGACTTAGCCTAAACAACCTGGTGCATCGAAATGTATTCAC  2294

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2295  CTTTCTTTTGTAAAGAGACCATCTTCTATCTTCTTTCCACCTTTCTCTGTTTTATGAAACCAACTGTTGACATA  2368

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2369  CAAACCATGATTGAAGGAGAACCTGTCCAACATGTTTTATGTACACAAATCCCTATGTTGCTATAAGAAAAGTG  2442

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2443  AAAGTAACTGTTTTCTTCTTGGTGCTATGACAGTGTGAGACTCAGGTTGTCTGTAGAGAATGAAAGGAGCAGTG  2516

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2517  GCCCGCGTGATTGTGGCATTTAAGGAGCAGTGGCCCATGTGACTGTGGCATTTTCGGCACTTTTCATTACTTTC  2590

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2591  TGCTTGACCGGAAGTTGAGGCTTAGCTATGTTTCCATCTTCAGTTTCTGAAGACTAGTTATATATTCCTTACTA  2664

Query  410  --------------------------------------------------------------------------  409
                                                                                      
Sbjct 2665  GAAATATATTCATAATATATAAAAGAAATATATCTGTGATTTTAAAATTTTGCTACCAAAGAATGCATGTTCTG  2738

Query  410  -----------------------------------------------------  409
                                                                 
Sbjct 2739  TGTGCCCTGAAAATGTTACCAGTGTTAATAAATGGATACTTATCAAAAAAGAA  2791

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