Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14147
- Subject:
- XR_001756216.2
- Aligned Length:
- 2626
- Identities:
- 220
- Gaps:
- 2395
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTACTCTTCTTTGCATTGGCCAGATATGTCGTCACTCACAAAACTTCGAGCTCATTGGTGCAAAAGCTCCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCGGTGGGTGATTGGTTGGTTGCTGTTCCTGCCCCCACGCCTGTCGTGGTTTAGCTGAACTGAGCTGAAATCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAAAGGCCGCGGAGTCGGCGGTGTTGTAGGTAGCGGTACCTTGAGTGGCAACAGAATTCGATTAAATTACAATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAAACATTTTTGAAAAGCTCTTTAAAAGTCTACTTGGGAAAAAAAAGATGCGGATTCTTATATTGAGTTTGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TACAGCTGGAAAAACCACCATCTTGTATAAATTGAAGCTGGGGGAGACTGTGCCTGCCGTCCCTACAGTAGGTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTGTGTGGAGACAGTAGAATATAAAAATAACACCTTCGGTGTCTGGGATGTTGGCAGCCACTTCAAAATCAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTCTGTGGCAGCATTTTTTCCAGAACACAAAAGGTGCCAGAAGCCCAGGAAGCACACATCAAGGCTCACTTGC 518
Query 1 -------------------------------------------ATGTGGACAGGAGGTAGAAGTCATCCTTTCC 31
|||||||.|||||||||||||||||||||||
Sbjct 519 CAGCGGGGTGCTGCCAATAAAATGTAGTCACGTGGAATTTGGAATGTGGAAAGGAGGTAGAAGTCATCCTTTCC 592
Query 32 TCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGG 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCCCCATAGCAGCAGGTGTGCAGGCTCTGGTGGTCAGCTGGACTCCATACTCCCCCACCAGTCACCAGCCTGG 666
Query 106 GGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGC 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGACCGTGGGGCTGCAAGGACCTCAGCAGCGGTTTCCCAAGTTTCCTGACTTCTTCCATCCTCTGGAAATCAGC 740
Query 180 TGTGGTTCGTGAGCCACACATCTCCCCA-----CACCAAGCTCCTCCATACAAGACCT----CGG----ACT-- 238
| ||||||.| .||.||.|||| |||.| |.||| |||||..| ||| |||
Sbjct 741 T-------GTGAGCTA-TCAGCTTCCCAGTTTGCACAA------TTCAT-CAAGAAATTATGCGGGGTCACTGG 799
Query 239 -------------GCATCACG----------------------------------------------------- 246
|||||.|.
Sbjct 800 CACAAATGATGAGGCATCTCCTGGAAGCTTAACTTCTTATCCATCCCATCTCTTGGACAGATGATGCCAGTTAA 873
Query 247 -------------------------------------------------------------------------- 246
Sbjct 874 TTACTTTGAATGCTGGTCTCGAACTCCTGGCTTGAAGTGATCCTTCTGTCTTGGCCTCCCGAAATGCTGAGATT 947
Query 247 -------------------------------------------------------------------------- 246
Sbjct 948 TCAAGCGTGAGTCATCATGTCTGGTCTCACAGCTCAGTTTTTAACATATGTATGAAATATCAACTGTGTTTGGT 1021
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1022 TCAAAGGACTTTATGATCTTACAGATAGGAACTAAGGAATAATAACGTAAGAAATAAAAAATGTGGAAATAAAA 1095
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1096 ATGTTCAGTCATAACATGATTAAAAGGTAAGGCACCAGGTGGGGGGTCGAAGTAAGTTCAAATCCAAAATAGAG 1169
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1170 ACCACTGGGCTAGTAGACACTTCACATTAGAAGCATGGCTAGGTGTCTACTCCCTGAGAACCAAAATTCCACCA 1243
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1244 GATACAATGAACAAAGCTTTAGAGAGAGAAAACATTTGAACATTTTACGGGCAGAAAATGGCCCACATACTCTA 1317
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1318 TAGACAATACAATTTCCTTCAAGGCAAACTAGAACTATAAGGCTTTTGGTCTAAGAAGTGAGTGTGTGCAAGGG 1391
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1392 ATACCTTTGCATACTAGGGAGGGGTAGACAACCCACACATTTAGCTTGGTTATTAAATGTCATTACTCAGACTT 1465
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1466 GACAGTTGATGACCAAGGAAGTAAGACTTTCACTAGAAGGGCTGCCCAGGTTGGAAAGCTGAGAGCAATCAGGG 1539
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1540 CCACCTCTTACAAGCAAATAAAGGTCTGTAGTAACTTAATTACAATCTCAGTCTCTAAGCCTTCAGGGTTGTGA 1613
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1614 AGCAGAAAGGCAACTCTGTTCAGGGACTCGTTAAACACCAGGTTTCCTTTGGGCACAGGCTATGACATTTGTGC 1687
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1688 CACTGTAGAACTGAATAGGAAATACAAGCAGTGCCATTCAACAGCATGACCACTTCCAAGGCTCACAGCAAAGC 1761
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1762 AGCTGATTATTGTATAAGAATCATATTTGGCCAATATGTCAGTGCCAGAAATGAGAGCTGGAACTGAATTCTCG 1835
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1836 ATTCGAGAAACATAATCTAATAAATTCTTCAGCAGAGTTTATTTATTCAGAGAGAAAACAATCACAACAATAGC 1909
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1910 ATATTTTGTCTGCTTACCTTGTAAGTATAGTTCTGAGTTTTTACACTTGTCATCTCATTTTTTCTTACAATATC 1983
Query 247 -------------------------------------------------------------------------- 246
Sbjct 1984 CGCAATAAGGTTGATTGGATTACTAACCCCAGTTTGCAGATAAAGATTGCAGCTTAGAGATATTAAATATCTTC 2057
Query 247 -------------------------------------------------------------------------- 246
Sbjct 2058 AAATCTCTCTGGCCATAAGACCTAAAACTGCATACAAAAATCTAAGAGACAGAGTTAGGACTCAAATCCATGTG 2131
Query 247 -------------------------------------------------------------------------- 246
Sbjct 2132 TCCAGGGCTTATAATCACTATTCTGTACGATAGGCATGCAATTAAAGAAGACCTGCCTCAAACATTTTCTGTGT 2205
Query 247 -------------------------------------------------------------------------- 246
Sbjct 2206 GACCTGAGGCAAGTCCTTTTATAGCTATAAACTAGGGACAATATTTGCTGTCATTTTTTCTACAAATGTCACAA 2279
Query 247 -------------------------------------------------------------------------- 246
Sbjct 2280 AGAACAAATTTGAGCCTGTCGCTGTGAAAGAACTTAGCAAATGAAAGCATCCTAGGGAGTGTTTTAGATATCGA 2353
Query 247 -------------------------------------------------------------------------- 246
Sbjct 2354 TATTTTTATCCAATTAACTTTTCAAAATGAGTTTATTTGCTCACTGAAACTGAAGTACTTCAACGACGATTAAG 2427
Query 247 -------------------------------------------------------------------------- 246
Sbjct 2428 GAAGTTTTACCTAGAACCACAATCAACAGTTTCTGGAATGCATCTGACAAAGCCTTCTCAATAGCAATCTGGGC 2501
Query 247 -------------------------------------------------------------------------- 246
Sbjct 2502 TATCTTCCCTTTCATAGGAATGACAACGGTCTTAAATCCAACCCAAACTAATGGATTTAAGATGCCTATCTGAG 2575
Query 247 ------------------------------------ 246
Sbjct 2576 TGATCATTGCTACATGTTGGTTAAAAAATAAAAATG 2611
