Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14262
- Subject:
- XM_011535227.3
- Aligned Length:
- 2403
- Identities:
- 1279
- Gaps:
- 1117
Alignment
Query 1 ATGCCGAACGTGCTGCTGCCGCCCAAGGAGAGCAACCTCTTCAAACGCATCTTGAAATGTTATGAACAGAAGCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCGAACGTGCTGCTGCCGCCCAAGGAGAGCAACCTCTTCAAACGCATCTTGAAATGTTATGAACAGAAGCA 74
Query 75 GTACAAAAATGGCCTCAAGTTTTGCAAGATGATTCTGTCGAACCCAAAATTTGCTGAACATGGAGAGACTTTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTACAAAAATGGCCTCAAGTTTTGCAAGATGATTCTGTCGAACCCAAAATTTGCTGAACATGGAGAGACTTTGG 148
Query 149 CTATGAAAGGATTAACACTGAACTGTTTAGGAAAAAAAGAAGAAGCTTATGAGTTTGTTCGTAAAGGACTTCGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTATGAAAGGATTAACACTGAACTGTTTAGGAAAAAAAGAAGAAGCTTATGAGTTTGTTCGTAAAGGACTTCGT 222
Query 223 AATGATGTCAAGAGTCATGTCTGTTGGCATGTATATGGACTCTTGCAGCGTTCTGATAAAAAATATGATGAAGC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AATGATGTCAAGAGTCATGTCTGTTGGCATGTATATGGACTCTTGCAGCGTTCTGATAAAAAATATGATGAAGC 296
Query 297 TATAAAATGTTACCGAAATGCCCTCAAATTAGATAAAGATAACCTGCAAATTTTGAGGGATCTCTCACTGTTGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TATAAAATGTTACCGAAATGCCCTCAAATTAGATAAAGATAACCTGCAAATTTTGAGGGATCTCTCACTGTTGC 370
Query 371 AGATCCAAATGAGAGACCTTGAAGGTTACCGAGAGACAAGATACCAGCTTCTTCAGTTGCGCCCCACACAGCGT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGATCCAAATGAGAGACCTTGAAGGTTACCGAGAGACAAGATACCAGCTTCTTCAGTTGCGCCCCACACAGCGT 444
Query 445 GCCTCCTGGATTGGATATGCTATTGCATACCATTTGCTGAAAGATTATGATATGGCCCTAAAACTGTTGGAAGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTCCTGGATTGGATATGCTATTGCATACCATTTGCTGAAAGATTATGATATGGCCCTAAAACTGTTGGAAGA 518
Query 519 ATTTAGACAAACTCAGCAAGTTCCTCCAAACAAAATAGATTATGAATATAGTGAATTGATATTATACCAGAATC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATTTAGACAAACTCAGCAAGTTCCTCCAAACAAAATAGATTATGAATATAGTGAATTGATATTATACCAGAATC 592
Query 593 AAGTGATGAGAGAGGCAGATCTGTTGCAGGAATCTTTGGAACATATAGAAATGTATGAGAAACAAATATGTGAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAGTGATGAGAGAGGCAGATCTGTTGCAGGAATCTTTGGAACATATAGAAATGTATGAGAAACAAATATGTGAT 666
Query 667 AAACTTTTGGTGGAAGAAATTAAAGGGGAAATACTGTTGAAATTGGGAAGATTAAAAGAAGCCAGTGAAGTGTT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAACTTTTGGTGGAAGAAATTAAAGGGGAAATACTGTTGAAATTGGGAAGATTAAAAGAAGCCAGTGAAGTGTT 740
Query 741 CAAAAACTTGATTGATCGAAATGCAGAAAACTGGTGTTATTATGAAGGCTTGGAAAAAGCTCTACAAATTAGCA 814
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAAAAACTTGATTGATCGAAATGCAGAAAATTGGTGTTATTATGAAGGCTTGGAAAAAGCTCTACAAATTAGCA 814
Query 815 CTTTAGAAGAGAGGCTTCAAATTTATGAAGAAATTAGTAAGCAGCACCCCAAAGCAATTACACCCAGAAGATTA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTTTAGAAGAGAGGCTTCAAATTTATGAAGAAATTAGTAAGCAGCACCCCAAAGCAATTACACCCAGAAGATTA 888
Query 889 CCTTTGACTCTTGTCCCAGGTGAAAGATTTAGAGAACTAATGGATAAGTTCCTGAGGGTTAACTTCAGTAAAGG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTTTGACTCTTGTCCCAGGTGAAAGATTTAGAGAACTAATGGATAAGTTCCTGAGGGTTAACTTCAGTAAAGG 962
Query 963 CTGCCCACCCTTGTTTACTACTTTGAAATCTTTATATTACAATACAGAAAAGGTTTCTATAATCCAGGAACTTG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGCCCACCCTTGTTTACTACTTTGAAATCTTTATATTACAATACAGAAAAGGTTTCTATAATCCAGGAACTTG 1036
Query 1037 TTACTAATTATGAAGCCTCTCTTAAAACGTGTGACTTTTTTAGCCCATATGAGAATGGGGAGAAGGAACCCCCG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTACTAATTATGAAGCCTCTCTTAAAACGTGTGACTTTTTTAGCCCATATGAGAATGGGGAGAAGGAACCCCCG 1110
Query 1111 ACAACACTACTCTGGGTTCAGTATTTCCTGGCACAGCACTTTGATAAACTTGGACAGTATTCTTTGGCTTTGGA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACAACACTACTCTGGGTTCAGTATTTCCTGGCACAGCACTTTGATAAACTTGGACAGTATTCTTTGGCTTTGGA 1184
Query 1185 TTATATTAATGCTGCAATTGCTAGTACTCCAACTCTAATAGAATTATTCTATATGAAAGCAAAAATTTACA--- 1255
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTATATTAATGCTGCAATTGCTAGTACTCCAACTCTAATAGAATTATTCTATATGAAAGCAAAAATTTACAAGC 1258
Query 1256 ----AGGTAAAATC-----------------------TGAATC-CTGTTTTTG-----AG----TAGT------ 1286
||||||..|| ||||.| |.||.|||| || |||.
Sbjct 1259 ATATAGGTAATCTCAAAGAAGCTGCAAAGTGGATGGATGAAGCACAGTCTTTGGACACAGCTGATAGATTCATC 1332
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1333 AATTCCAAATGTGCAAAATACATGCTTCGAGCAAATATGATAAAAGAAGCAGAGGAAATGTGCTCCAAGTTCAC 1406
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1407 AAGGGAAGGAACATCTGCCATGGAAAATCTAAATGAAATGCAGTGTATGTGGTTTCAGACAGAATGCATTTCAG 1480
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1481 CTTATCAGCGTCTGGGGAGATACGGGGATGCCTTGAAAAAATGTCATGAAGTAGAAAGGCATTTTTTTGAGATA 1554
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1555 ACTGATGACCAATTCGACTTCCATACATACTGCATGAGAAAGATGACCCTTCGTGCCTATGTTGACCTTTTGAG 1628
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1629 ATTAGAAGATATACTCAGAAGACATGCCTTTTATTTCAAGGCTGCTAGATCAGCGATTGAAATATACTTGAAAT 1702
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1703 TGTATGATAATCCCTTAACCAATGAAAGCAAACAACAAGAAATAAACTCAGAAAACTTGTCAGCCAAAGAATTG 1776
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1777 AAGAAAATGCTTAGCAAGCAGAGAAGAGCTCAGAAAAAGGCTAAACTAGAAGAAGAAAGAAAGCATGCAGAAAG 1850
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1851 AGAACGTCAACAGAAAAATCAAAAGAAAAAAAGAGATGAAGAAGAAGAAGAAGCCAGTGGCCTTAAGGAAGAAC 1924
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1925 TTATACCTGAAAAATTAGAAAGGGTAGAAAATCCATTAGAGGAAGCCGTTAAGTTCCTTATACCTCTTAAGAAC 1998
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 1999 CTTGTTGCTGATAACATTGACACTCATCTGTTAGCATTTGAAATATATTTTAGAAAAGGAAAGTTTCTGTTAAT 2072
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 2073 GCTGCAGTCTGTCAAACGAGCTTTTGCCATTAACAGTAATAACCCATGGTTACATGAATGTTTAATTAGATTTT 2146
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 2147 CTAAATCTGTGTCTAATCATAGTAATCTTCCAGACATTGTGAGCAAAGTTCTATCTCAAGAAATGCAGAAAATA 2220
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 2221 TTTGTCAAAAAGGATTTGGAAAGTTTTAATGAGGATTTTCTGAAACGTAACGCTACCTCTCTTCAGCATCTACT 2294
Query 1287 -------------------------------------------------------------------------- 1286
Sbjct 2295 TTCAGGTTTGTTTGTAGCCCCCAGGGTTAAAATACTTATGGAAAAAGCGAACAAAGAGAAAGCTTTGACACCCC 2368
Query 1287 ----------------------------------- 1286
Sbjct 2369 CAAAATGTAAAGCAAATGAACAGTACTGTGTGTGC 2403
