Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14276
Subject:
XR_001747203.2
Aligned Length:
3216
Identities:
1531
Gaps:
1683

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTTGCCGGCTGCGGCAGTAGCTCTCGCCTGCGGGTGGTTTGACAAGGCTGGCGGCGCCACACCAGCGACCAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGGAGCTCACACTTCTGAGAGGCATCGCAAGCGAGGGCCTTCACGTTACTGAGACCCCAGCCCCGCACAGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTCATGGAGCTCGAAGCACGCAGGGCTGGCCTCTCCAGAGCTAGCAGATTCCTTCTGGACCTGTAGGGTGCCG  222

Query    1  ----------------ATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGCCTAGGAGACCTGAGCTCCG  58
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCCTAGCCCAGCCGCCATGGCGCAGGGTTTCGCAGTGGGCTTCGACCCACTGGGCCTAGGAGACCTGAGCTCCG  296

Query   59  GCTCTCTGAGCTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTA  132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCTCTCTGAGCTCCCTCTCCTCCCGAGGCCACCTAGGCAGCGACTCAGGCTCCACCGCAACGCGATACCTGCTA  370

Query  133  AGGAAGCAACAACGGCTGCTGAACGGGCCCCCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGCGTCATCCT  206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGAAGCAACAACGGCTGCTGAACGGGCCCCCCCGCGGAATCCGAGCCTCATCGCCCATGGGACGCGTCATCCT  444

Query  207  CATCAACTCCCCCATCGAAGCCAACAGTGATGAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAGAGTCCAG  280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CATCAACTCCCCCATCGAAGCCAACAGTGATGAAAGTGACATCATCCATTCAGTCCGGGTGGAGAAGAGTCCAG  518

Query  281  CAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAA  354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGGGAGGCTGGGCTTCAGCGTGCGCGGGGGCTCAGAGCATGGCCTGGGCATCTTCGTCAGCAAAGTGGAGGAA  592

Query  355  GGCAGCAGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAG  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGCAGCAGTGCAGAGCGGGCTGGCCTGTGCGTGGGGGACAAGATCACGGAGGTGAATGGGCTGAGCCTGGAGAG  666

Query  429  CACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCC  502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CACCACCATGGGTAGCGCCGTAAAGGTGCTGACCAGCAGCAGCCGCCTGCACATGATGGTTCGGCGCATGGGCC  740

Query  503  GTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGCGCCTGGTAGTGGAG  576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTGTGCCGGGCATCAAGTTCTCCAAGGAGAAGACCACGTGGGTGGATGTGGTGAATCGGCGCCTGGTAGTGGAG  814

Query  577  AAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTC  650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AAGTGCGGTTCAACACCCTCCGACACCAGCTCAGAAGATGGTGTCCGGCGCATCGTCCACCTATACACAACCTC  888

Query  651  CGACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAGTGG  724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGACGACTTCTGCCTGGGCTTCAACATCCGTGGGGGCAAGGAGTTTGGCCTGGGCATCTATGTGTCCAAAGTGG  962

Query  725  ACCATGGTGGGCTGGCCGAGGAGAATGGCATCAAGGTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTT  798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ACCATGGTGGGCTGGCCGAGGAGAATGGCATCAAGGTGGGGGACCAGGTCCTGGCAGCCAACGGTGTCAGGTTT  1036

Query  799  GACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGAC  872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GACGACATCAGCCACAGCCAGGCCGTGGAGGTGCTGAAGGGCCAAACGCACATCATGCTGACCATCAAGGAGAC  1110

Query  873  CGGCCGGTATCCTGCCTACAAGGAGATGGTTTCTGAGTACTGCTGGCTGGACCGACTGAGCAACGGGGTGCTGC  946
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CGGCCGGTATCCTGCCTACAAGGAGATGGTTTCTGAGTACTGCTGGCTGGACCGACTGAGCAACGGGGTGCTGC  1184

Query  947  AGCAGCTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCTCGGGC  1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCAGCTGTCCCCGGCCTCTGAGAGCAGCTCCAGCGTCTCTTCGTGCGCCTCCAGCGCCCCCTACAGCTCGGGC  1258

Query 1021  TCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCG  1094
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCCCTGCCGTCGGACCGCATGGACATCTGCCTCGGGCAGGAGGAGCCCGGCAGCCGCGGCCCAGGCTGGGGGCG  1332

Query 1095  GGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG  1168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGCGGACACAGCCATGCAGACGGAGCCCGATGCGGGAGGCCGGGTGGAGACCTGGTGCAGCGTGCGGCCCACAG  1406

Query 1169  TCATCCTCAGGGACACCGCCATCCGCTCGGACGGCCCCCATCCCGGCCGCCGCCTTGACTCTGCGCTCTCTGAG  1242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCATCCTCAGGGACACCGCCATCCGCTCGGACGGCCCCCATCCCGGCCGCCGCCTTGACTCTGCGCTCTCTGAG  1480

Query 1243  TCTCCCAAGACGGCTTTGCTGCTGGCCCTCAGCCGACCCCGGCCCCCCATCACGCGCTCCCAGAGCTATCTGAC  1316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCTCCCAAGACGGCTTTGCTGCTGGCCCTCAGCCGACCCCGGCCCCCCATCACGCGCTCCCAGAGCTATCTGAC  1554

Query 1317  CTTGTGGGAGGAGAAGCAGCAGCG---GAAGGAGAAGTCGGGGTCCCCTGGGGAGAAGGGTGCCCTGCAGCGCT  1387
            ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTTGTGGGAGGAGAAGCAGCAGCGGAAGAAGGAGAAGTCGGGGTCCCCTGGGGAGAAGGGTGCCCTGCAGCGCT  1628

Query 1388  CCAAGACGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGGGAGGCTAGCGCGGGACGGGCGCAGAGAGGCC  1461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CCAAGACGCTGATGAACCTCTTCTTCAAGGGAGGGCGGCAGGGGAGGCTAGCGCGGGACGGGCGCAGAGAGGCC  1702

Query 1462  TGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGA---------------  1520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
Sbjct 1703  TGGACACTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAAAGATGGAGTTTTGCTCTT  1776

Query 1521  GATG----GG------------GGCAACA---------------------------------------------  1533
            |.||    ||            ||||.||                                             
Sbjct 1777  GTTGCCCAGGCGAGAGTGTAATGGCACCATCTCAGCTCACTGCGACCTGCGCCTCCCACGCTCAAGCGATCCTC  1850

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 1851  CCACCTCAGCCTCCCAAAGTGCTGGCATGACACGTGTGCATCACCATGCTCAGCTAATTTTTTTGCATCTTTTT  1924

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 1925  GTAGAGATGGGGGTTTCACCCTGTTGCCCAGGCTAGTCTCAAATTCCTGGACTGAAGCTATCTACCCGCCTTAG  1998

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 1999  TCTCCCAAAGTGCTAGGATTACAGCGTGATCTACCACACCTGGCCAATCCCAACTACTCTGGAAGCTGAAGCAG  2072

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2073  CAAGATCACTTGAGCCCAGGAGTTTAAGACCAGCCTGGGCAACATAGCAAGACCCTGTCTCTAAAGAAAAAAAA  2146

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2147  AAAGTAAAAGAAAAATAAAGCACGTCTTGGCTCAGCTGCTGATTTAAGCTGGGTCTAAACATCTGAGCAACATC  2220

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2221  ATCAGACATCTGTCCCCCTCCATCTCTCCCATGAGTTGACTTCGCTATTGTGGGGCTTTGCCCACCTGGGGGTA  2294

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2295  AGATGACCTCTATTGCATAGCAACCCCAGGGGAAAGTGCTTCTCCTTAAATAGTTCCAGCTGAAGTCCCAGGGT  2368

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2369  AGGCTCTCCCTGGCCCAGCTGAGATCCTGTGCCATGCAGAATAAATCGCTGTGATGTGGGAGGGAAAGTGCTTT  2442

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2443  TGTTGGCCAGCCTGGGTCATGTACCCACCCTGGAGTACACGGGCTAAGAACAGAGTGGGGTGGGTCCCCAGGGG  2516

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2517  AAAATCAGGGTGCTGTTTTCAGAAGAGGGGGGTGGATGTCGGATCAACAAAACAACCAGAGGATGAGGAGCTGG  2590

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2591  ACCCTGCTTTGCCCTGGGGTGGGATGTTCTGGGGTCTCAAGGTGATTGTACCATGGGAGAGACAATCCCTTCCA  2664

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2665  ATTACGGCTGCCTGGCCCCTCTCCGTCAGTGCATCTCTCTTCCCACAGTTCCCAAGTCCCTGCCCTCTGCTGGT  2738

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2739  TCTCCTCCCACCTCTCTGGCCACTCCTCTATCTCCTTCCAAGGCTCCTCTTTTTCCCTCTGTCCCCTGAAGGTA  2812

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2813  GGTACTTCTCCAAGCTCTGTCCCTGAGGTTCTTCCCTCCATACATTTGCTTCCAAGTGAATTTGCATAAGCAGT  2886

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2887  GCTCAGACTGCACCCTGTTTTGATCCAAAACCGTCCTGACTCCCCATTGCCTATGAAGGAAGTCCATAGCCTGA  2960

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 2961  GCATTGCCTTCAAGCCCCTCAGGGCCAGGCCTCTTGCCTCCCTATCCCACCTACTTCCAGTCTGAATTCTCCAT  3034

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 3035  TCCAGCTTGTCCTGAGCCCTCCTGAACCCCATTTTCAGACTGGGGGCCAAGGCCTGCAGCTGAGCCTCTTTCTT  3108

Query 1534  --------------------------------------------------------------------------  1533
                                                                                      
Sbjct 3109  CTTCATAGCAGGGGGCGTGGGCCCGGTACAGAAGTTTGTCACCTGGAGACTGAGACGTGACCAGGAGAGGGGCC  3182

Query 1534  ----------------------------------  1533
                                              
Sbjct 3183  GGGCCCTGCTGTCTGCCAGGTCTGGGAGTCCCTC  3216

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