Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14311
- Subject:
- XM_006530265.3
- Aligned Length:
- 2187
- Identities:
- 775
- Gaps:
- 1272
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGTAGCTCTGAGGGCGCGCCGTCCTGGGCTGTGGCTTTGCCCCCGCCGCTGCGGCCGTGCGCCTATGGCGT 74
Query 1 -------------------------------------------------------ATGAACCCTCCGGCAGCCT 19
|||||||||.||||..|||
Sbjct 75 CTCGGAGGTGACCCGCTGCTGGCACCAACTCTCTCTGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGACCT 148
Query 20 T---CCTTGCCGGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCCACTATCGAGAAACAACGGAAGGAGCTG 90
| || ||||||||||||||||.|||||||||||||.|||||||||.|||||.||.||||||||.||.
Sbjct 149 TATACC------GGCGCCAGAACATCGGATCAGAAGTTGAGACTTCCACTATTGAGAAGCAGCGGAAGGAACTT 216
Query 91 CAGTTGCTCATTGGAGAATTAAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCT 164
|||.|||||||.||.||..|.|||||.||.|||||.|||||||||||||||||.||||||||.|||...|||||
Sbjct 217 CAGCTGCTCATCGGGGAGCTGAAAGACCGCGATAAGGAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAGCT 290
Query 165 TCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGACACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACTAC 238
|||.||.|||||||||||.||||||||||||.||||.|||||.||.||.||||||||..|.||||||||.||.|
Sbjct 291 TCTCTCCTGGGAAGAGGACCGGCAGAAAGTGCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGC 364
Query 239 ATAAAAGAACTGAAATAATCAGGTAGACT--CCAAGAAGGTAAAAGCTCTTGAATCACAATCAAATGGAATGCC 310
|||||||.|||||.|||||||.|| .||| ..||||||||.||..|.||.||.|| |||||||...||.||||
Sbjct 365 ATAAAAGGACTGACATAATCAAGT-CACTGATGAAGAAGGTCAAGACCCTGGAGTC-CAATCAAGCAGAGTGCC 436
Query 311 AAACAGCTCTCCAAAAGACCCAACTACAGCTTCAGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTTCTCTCT 384
|.||||||||.||.|||||.||.|..|||||.|||||.||||||||.|||||.||.||.||..|.||.|||||.
Sbjct 437 AGACAGCTCTTCAGAAGACGCAGCAGCAGCTCCAGGAGATGGCTCAGAAGGCCACACACTCCACCCTCCTCTCG 510
Query 385 GAAGACCTTGAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACA 458
||||||||||||||||||||.||||.||||||||.||||||||||||.||.|||||.|||||||||||..|.||
Sbjct 511 GAAGACCTTGAGGCTAGAAATGAAAATCTCAGCAGCACGTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCA 584
Query 459 AGCTCGAGAACAAGCTCTTACGACAATGATAAAGCTAAAGGACAAAGATATTATTGAGGCAGTTAATCACATTG 532
||||.||||.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||.||.|||||||||.
Sbjct 585 AGCTAGAGAGCAGGCTCTCACTACCATGATAAAGCTAAAGGACAAAGACATTATTGAGGCCGTCAATCACATTT 658
Query 533 CAGATTGTTCGGGTAAATTTAAAATGCTAGAGCATGCCCTACGTGATGCCAAGATGGCGGAGACTTGTATTGTG 606
||||.||.|||||||||||||||.||.|||||||.||..|||||||||||||||||||||||||.|||.|.|||
Sbjct 659 CAGACTGCTCGGGTAAATTTAAATTGTTAGAGCACGCTTTACGTGATGCCAAGATGGCGGAGACGTGTGTGGTG 732
Query 607 AAAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGACCTCAA 680
|.||||||||||||||||||||||||||||||||||||||.||||||||||||.|||||.||||||||.||.||
Sbjct 733 AGAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAGGATTGAAGTCAATAAACTGAAAGAGGATCTAAA 806
Query 681 TGAAAAGACGACAGAAAATAATGAGCAACGAGAAGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTGCACG 754
|||.|||||.||||||||.|||||.||||||||.|||||.|||||.|||||||||||||||||.||.||.||.|
Sbjct 807 TGAGAAGACAACAGAAAACAATGAACAACGAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCTACATG 880
Query 755 ATGAATTGCTTTTTACTGTAGAGAGAGAAAAGAGGAAAGATGAATTGCTTAATATTGCGAAGTCAAAGCAAGAA 828
||||..|..||||||||||.|||||.||||||||||||||||||||.|||.|||||||.||||||||||||||.
Sbjct 881 ATGAGCTAATTTTTACTGTTGAGAGGGAAAAGAGGAAAGATGAATTACTTGATATTGCAAAGTCAAAGCAAGAT 954
Query 829 CGCACAAATTCAGAACTGCACAATCTGAGACAGATTTATGTAAAACAACAGAGTGATCTGCAGTTTCTTAATTT 902
||.||||||||.||.||.||.|||||||||||| .||||| ..||| ||||
Sbjct 955 CGTACAAATTCCGAGCTCCAGAATCTGAGACAG--GTATGT-----CCCAG------CTGC------------- 1002
Query 903 CAATGTGGAAAATTCTCAGGAATTAATACAGATGTATGACTCAAAGATGGAGGAATCAAAGGCTCTG-GACTCC 975
.||| |.||| ||| ||.||| | ||
Sbjct 1003 -------------------------CTAC-GCTGT--------------GAG----CACAGG----GAGA---- 1024
Query 976 AGCAGAGACATGTGTTTATCAGACCTTGAAAATAACCACCCAAAAGTCGATATTAAGAGGGAAAAAAATCAGAA 1049
||||..||||||||||||||||||||
Sbjct 1025 AGCAAGGACATGTGTTTATCAGACCT------------------------------------------------ 1050
Query 1050 GTCACTGTTTAAGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGACAAGAGCTCTTGCGATG 1123
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1124 AATGCAAAGAGAAGAAACAACAGATCGATACTGTGTTTGGGGAGAAAAGTGTAATTAAGCTGTCATCCATATTC 1197
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1198 ACCAAAGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCTGGGAGGAAAAACCCAGATTGAACCCGAAAACAA 1271
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1272 AATTACATTGTGCAAGATCCACACAAAATCACCAAAATGTCATGGCACTGGGGTTCAGAACGAAGGAAAACAAC 1345
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1346 CCTCAGAAACACCCACTTTATCTGATGAGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGCCTGACCAACTGT 1419
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1420 CCAAGTTCAAAACATCCAGAAAAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGGTCCGAAATCTCATGCTG 1493
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1494 CCAGAAAAATGAAGCCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGAGTAACTTCATAA 1567
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1568 TTGAAGCCCCAGGCCACATGTCTGACGTGGAGTGGATGAGTATTTTCAAGCCTTCCAAAATGCAGAGAATTGTC 1641
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1642 CGCCTCAAATCTGGGTGCACCTGTTCAGAAAGCATCTGTGGCACACAACATGACTCCCCGGCAAGTGAGCTAAT 1715
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1716 TGCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTGAGAGAAGATGAGACGGAGTCCTCTTCCA 1789
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1790 ATAAAAAGAACTCACCTACGAGTTTGTTAATCTACAAAGATGCACCAGCATTCAATGAAAAGGCTTCAATTGTG 1863
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1864 TTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCGTCAGATGGTGAC 1937
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 1938 GGACCTGGAGCTGAGCACACTGCTGCCCATCAGCCATGAGAATCTCACTGGCAGTGCCACAAATAAGTCAGAGG 2011
Sbjct 1051 -------------------------------------------------------------------------- 1050
Query 2012 TCCCAGAAGAGTCAGCTCAAAAAAATACCTTTGTCAGTTAT 2052
Sbjct 1051 ----------------------------------------- 1050
