Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14311
- Subject:
- XM_006530268.2
- Aligned Length:
- 2199
- Identities:
- 753
- Gaps:
- 1305
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGTAGCTCTGAGGGCGCGCCGTCCTGGGCTGTGGCTTTGCCCCCGCCGCTGCGGCCGTGCGCCTATGGCGT 74
Query 1 -------------------------------------------------------ATGAACCCTCCGGCAGCCT 19
|||||||||.||||..|||
Sbjct 75 CTCGGAGGTGACCCGCTGCTGGCACCAACTCTCTCTGGGGGCGGGGGAGTCATCCATGAACCCTTCGGCGACCT 148
Query 20 T---CCTTGCCGGGCGCCAGAACATCGGGTCAGAAGTTGAGATTTCCACTATCGAGAAACAACGGAAGGAGCTG 90
| || ||||||||||||||||.|||||||||||||.|||||||||.|||||.||.||||||||.||.
Sbjct 149 TATACC------GGCGCCAGAACATCGGATCAGAAGTTGAGACTTCCACTATTGAGAAGCAGCGGAAGGAACTT 216
Query 91 CAGTTGCTCATTGGAGAATTAAAAGATCGAGATAAAGAGCTCAATGACATGGTTGCAGTGCACCAGCAACAGCT 164
|||.|||||||.||.||..|.|||||.||.|||||.|||||||||||||||||.||||||||.|||...|||||
Sbjct 217 CAGCTGCTCATCGGGGAGCTGAAAGACCGCGATAAGGAGCTCAATGACATGGTCGCAGTGCATCAGAGGCAGCT 290
Query 165 TCTTTCATGGGAAGAGGATCGGCAGAAAGTGTTGACACTGGAAGAACGTTGCAGCAAATTAGAAGGTGAACTAC 238
|||.||.|||||||||||.||||||||||||.||||.|||||.||.||.||||||||..|.||||||||.||.|
Sbjct 291 TCTCTCCTGGGAAGAGGACCGGCAGAAAGTGCTGACCCTGGAGGAGCGCTGCAGCAAGCTCGAAGGTGAGCTGC 364
Query 239 ATAAAAGAACTGAAATAATCAGGTAGACT--CCAAGAAGGTAAAAGCTCTTGAATCACAATCAAATGGAATGCC 310
|||||||.|||||.|||||||.|| .||| ..||||||||.||..|.||.||.|| |||||||...||.||||
Sbjct 365 ATAAAAGGACTGACATAATCAAGT-CACTGATGAAGAAGGTCAAGACCCTGGAGTC-CAATCAAGCAGAGTGCC 436
Query 311 AAACAGCTCTCCAAAAGACCCAACTACAGCTTCAGGAAATGGCTCAAAAGGCAACGCATTCTTCTCTTCTCTCT 384
|.||||||||.||.|||||.||.|..|||||.|||||.||||||||.|||||.||.||.||..|.||.|||||.
Sbjct 437 AGACAGCTCTTCAGAAGACGCAGCAGCAGCTCCAGGAGATGGCTCAGAAGGCCACACACTCCACCCTCCTCTCG 510
Query 385 GAAGACCTTGAGGCTAGAAACGAAACTCTCAGCAACACGTTAGTGGAACTTTCTGCCCAGGTAGGACAGCTACA 458
||||||||||||||||||||.||||.||||||||.||||||||||||.||.|||||.|||||||||||..|.||
Sbjct 511 GAAGACCTTGAGGCTAGAAATGAAAATCTCAGCAGCACGTTAGTGGACCTCTCTGCTCAGGTAGGACAATTGCA 584
Query 459 AGCTCGAGAACAAGCTCTTACGACAATGATAAAGCTAAAGGACAAAGATATTATTGAGGCAGTTAATCACATTG 532
||||.||||.||.|||||.||.||.|||||||||||||||||||||||.|||||||||||.||.|||||||||.
Sbjct 585 AGCTAGAGAGCAGGCTCTCACTACCATGATAAAGCTAAAGGACAAAGACATTATTGAGGCCGTCAATCACATTT 658
Query 533 CAGATTGTTCGGGTAAATTTAAAATGCTAGAGCATGCCCTACGTGATGCCAAGATGGCGGAGACTTGTATTGTG 606
||||.||.|||||||||||||||.||.|||||||.||..|||||||||||||||||||||||||.|||.|.|||
Sbjct 659 CAGACTGCTCGGGTAAATTTAAATTGTTAGAGCACGCTTTACGTGATGCCAAGATGGCGGAGACGTGTGTGGTG 732
Query 607 AAAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAAGATTGAAGTCAACAAACTAAAAGAGGACCTCAA 680
|.||||||||||||||||||||||||||||||||||||||.||||||||||||.|||||.||||||||.||.||
Sbjct 733 AGAGAAAAGCAAGATTATAAGCAGAAATTGAAGGCACTTAGGATTGAAGTCAATAAACTGAAAGAGGATCTAAA 806
Query 681 TGAAAAGACGACAGAAAATAATGAGCAACGAGAAGAGATCATTCGCCTCAAGCAAGAGAAAAGTTGCCTGCACG 754
|||.|||||.||||||||.|||||.||||||||.|||||.|||||.|||||||||||||||||.||.||.||.|
Sbjct 807 TGAGAAGACAACAGAAAACAATGAACAACGAGAGGAGATAATTCGACTCAAGCAAGAGAAAAGCTGTCTACATG 880
Query 755 ATGAATTGCTTTTTACTGTAGAGAGAGAAAAGAGGAAAGATGAATTGCTTAATATTGCGAAGTCAAAGCAAGAA 828
||||..|..||||||||||.|||||.||||||||||||||||||||.|||.|||||||.||||||||||||||.
Sbjct 881 ATGAGCTAATTTTTACTGTTGAGAGGGAAAAGAGGAAAGATGAATTACTTGATATTGCAAAGTCAAAGCAAGAT 954
Query 829 CGCACAAATTCAGAACTGCACAATCTGAGACAGATTTATGTAAAACAACAGAGTGATCTGCAGTTTCTTAATTT 902
||.||||||||.||.||.||.|||||||||||| .||||| ..|||.|.|.||
Sbjct 955 CGTACAAATTCCGAGCTCCAGAATCTGAGACAG--GTATGT-----------------CCCAGCTGCCTA---- 1005
Query 903 CAATGTG-------------GAAAATTCTCAGGAATTAATACAGATGTATGACTCAAAGATGGAGGAATCAAAG 963
|..|||| ||||.|||||||||||
Sbjct 1006 CGCTGTGAGCACAGGGAGAAGAAAGTTCTCAGGAAT-------------------------------------- 1041
Query 964 GCTCTGGACTCCAGCAGAGACATGTGTTTATCAGACCTTGAAAATAACCACCCAAAAGTCGATATTAAGAGGGA 1037
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1038 AAAAAATCAGAAGTCACTGTTTAAGGACCAGAAATTTGAAGCCATGTTGGTTCAGCAAAATAGGTCAGACAAGA 1111
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1112 GCTCTTGCGATGAATGCAAAGAGAAGAAACAACAGATCGATACTGTGTTTGGGGAGAAAAGTGTAATTAAGCTG 1185
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1186 TCATCCATATTCACCAAAGACTTAGTAGAGAAACACAACCTCCCTTGGTCTCTGGGAGGAAAAACCCAGATTGA 1259
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1260 ACCCGAAAACAAAATTACATTGTGCAAGATCCACACAAAATCACCAAAATGTCATGGCACTGGGGTTCAGAACG 1333
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1334 AAGGAAAACAACCCTCAGAAACACCCACTTTATCTGATGAGAAGCAGTGGCATGATGTCAGTGTTTACCTGGGC 1407
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1408 CTGACCAACTGTCCAAGTTCAAAACATCCAGAAAAGCTGGATGTAGAATGTCAAGATCAGATGGAAAGGTCCGA 1481
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1482 AATCTCATGCTGCCAGAAAAATGAAGCCTGTCTGGGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGA 1555
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1556 GTAACTTCATAATTGAAGCCCCAGGCCACATGTCTGACGTGGAGTGGATGAGTATTTTCAAGCCTTCCAAAATG 1629
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1630 CAGAGAATTGTCCGCCTCAAATCTGGGTGCACCTGTTCAGAAAGCATCTGTGGCACACAACATGACTCCCCGGC 1703
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1704 AAGTGAGCTAATTGCCATCCAAGATTCCCACTCTTTGGGTTCTTCAAAATCTGCCTTGAGAGAAGATGAGACGG 1777
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1778 AGTCCTCTTCCAATAAAAAGAACTCACCTACGAGTTTGTTAATCTACAAAGATGCACCAGCATTCAATGAAAAG 1851
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1852 GCTTCAATTGTGTTACCCTCCCAGGATGATTTCTCGCCCACGAGCAAGCTCCAGCGTTTGCTGGCGGAATCTCG 1925
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1926 TCAGATGGTGACGGACCTGGAGCTGAGCACACTGCTGCCCATCAGCCATGAGAATCTCACTGGCAGTGCCACAA 1999
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 2000 ATAAGTCAGAGGTCCCAGAAGAGTCAGCTCAAAAAAATACCTTTGTCAGTTAT 2052
Sbjct 1042 ----------------------------------------------------- 1041
