Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14312
- Subject:
- NR_149156.2
- Aligned Length:
- 4207
- Identities:
- 611
- Gaps:
- 3595
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACCTGCAGAGTGAAGAAAGCTGGTAATAGATGTCTGACAAACTAAAGAAAGACTTGTGTTACGATCAGAACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCGATTTAGAAAAAGAACACTACATGAAACAAAGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCT 666
Query 1 ---------------ATGGAACAGGAGGATAATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGC 59
|||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGC 740
Query 60 AATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTC 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTC 814
Query 134 AACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTA 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTA 888
Query 208 GAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGG 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGG 962
Query 282 AGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAAC 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAAC 1036
Query 356 TGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAA 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAA 1110
Query 430 GTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAA 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAA 1184
Query 504 GTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAG 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAG 1258
Query 578 ACTTTGTTAACATCTTACGTACTCCATGGGGGATT--------------------------------------- 612
|||||||||||||||||||||||||||||||||||
Sbjct 1259 ACTTTGTTAACATCTTACGTACTCCATGGGGGATTTAGTCTTTAATAATACATATGTCATCAACACTAAGCATT 1332
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1333 TTATTGGAGAGATGATATCAATGTAAAGGATGATCAAACACTGGAATATATTTTCCTAGGACTTCCTTTATTCT 1406
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1407 GGTTTCTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTCTCAAAAATGTTGAATTTGGAAAGAGAACTATCCAGAA 1480
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1481 AGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGTGTATGCCTGTTCACATGTCCTTACATTTGTAAAGATAT 1554
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1555 CTTTTTGGTTTATTACTTATCTTGCGTATATTTTAGAGGTCATTTTTTATTAACTTCAGTAGGAAAGTTACATC 1628
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1629 TGCATCAAACAATATGGCAACATCTATTTATTAACCAAGTTTCCTGTCCTTTCACATTGTTTTTTGCTACCTCT 1702
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1703 TCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGGGCCCAAAGCCAGTGAGATAATTCAA 1776
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1777 TGTGTTTTTAACACATGAAAATATTAAAGGATATGCAAGAGAAATTTTTCAAGCAGTGTGATTATAGATGTTTT 1850
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1851 CTGTATATAGAATATTTCAAATGATGGAGGTTTACCCCATGATGCTCATTTAAATACTGACTTGTCTTTTAAAT 1924
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1925 CTGTCTTCTAAATTATGTACTGTTGTTGGTTAAATAGAGCACAATGTAGTTATTCTAATGCCCAGTTGTATTTG 1998
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1999 TTCTTTTATTCTGCTTTTTAACTGTAATCCTTTTTACCAGCATACGATTGTTATTGAGCAATATGAAAGGGAAA 2072
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2073 TGTTCTTTATTAAAATCAATACATTATCTTATTAAACAAAGATCCTAAAAGTATATTGTTGCATATATGAATCC 2146
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2147 AAGGAATAGTTCAGTAATTATTGCCTAAAATGTGAAAGCATATTTTGTATCCTAAAATGAATGTATGATATTCT 2220
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2221 AAACATCTGTTTTAGTATAACAAACAATTGAAACATTTCCTTCTAAATATATGTTATTTAATAGTTACATGTAT 2294
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2295 TATAATCATTCTTTCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACTTTATGAG 2368
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2369 TTGTTTTCAACTTCATAATTTTAAATTTTCTATGTTAATATAACATAAATTAGAAAAAATAAGTGATTCAAAAT 2442
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2443 GAAAATATTTACTTTGTAGAATATGACTTTAGACATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAA 2516
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2517 GTGTGATACATGTGAACCCAACAAATTCAAAGTTGCACTTTTCAAGATGTGAGAAGGTACTAAAACTTAATACT 2590
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2591 AAAACATGAGAGGGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATTCTTTATTTCTTGATTTT 2664
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2665 TTTAAAAATTAGGTTATTAAAATTAAAACAATATGCTAGAAGACATTTTGGCAGAAATAAGTCTATAACACTAT 2738
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2739 TTTTGTCACATATCTTTTTCTTGGAAAAATTTATCCAACTATAGACATCTTAAACCCTACAAATTGTTCTTGTT 2812
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2813 AAAAATGACTAATACTGGGGGTGCTCAATATGCATATAGTGTTTTTCATTGATAATTTTTATTTAGTTCTTAAG 2886
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2887 AAACCTGTTCTTAATGTTGGCATGTCACATTTTTCTGTTACTATAATCAGAAAATGTATAGTCTGTTATACTGT 2960
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2961 AAAAAAAAAAAAAAAGGGAAGCTACTTTTGGAATGTAACGTGTTAACATGACAGCATACTCTTAGTATTAATCT 3034
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3035 TAATCTTCCTAACATAAGCATTCACATGTGGTTATTTGTAGGAAATAGCTCTATTTATGAGATTTTTTTTGGTG 3108
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3109 TATTTTGTTAGAATTGGTGACACAGTAAATCATTCTGCTTTTGGATTTGCCTGACTGCCTGCATTCTTCTTTGA 3182
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3183 TTTTGGTATAGTAAAATCTGTTATTTAGTGTTAAACTTAATAAAAGAGCATTTAAGAGAAGTGACATTTCAAAC 3256
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3257 ATCCACAACACAACTGACTTTTGAAATCCTATGCTTAATAGTCTTTGTAATTCTAAAAGACCTTTTGAAAATGT 3330
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3331 TAAAATATTAAATTATATGTTGTAATGCTGTTACATGAATTTTATAGTTATGTATATTTTATAGATCTCTATGT 3404
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3405 CTTTGTAAGTTACTTGCTTGTATGCTATATAATTGCTTTCTCAGTTAACCATACTGTTTATGGAATTGTATATA 3478
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3479 CTGATTTTTCTGTTTTTATATTTTAAAAATAAAAGTTGAGAATTTTAAGGAAAAACATTTTATTAAAAAGACAA 3552
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3553 GGTATATTATATAGGAATTTTAAGCTAACTTTTAATGGAAAGGACATACATATTTGCATGATGGAGCAATCACA 3626
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3627 TTATAGTTAAACATGTATGTCCCTGTTTTAAATTTTATAGTATATAAATATATGTGCTAATGAACCAGCGACTC 3700
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3701 TGCATAGAGGCAGTCACTTAGAGTAATTAATAATCTTGATACAGCTGTAGATCATATCTTATTTTACATATTAC 3774
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3775 TTTTGACTTCCAGTTTAAGTTGTTTGTTATCAAGTATTTCAGGAGAGAATTGTGTACATTAGGCTATGTTTACT 3848
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3849 GCAGATTATGTAACATGCTTTTATGAGATTATAGTTTGTAGTGCTTGCAAATATAAAACATGTACCCTGATAAA 3922
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3923 CTATAATCACTACTAGGTTGACCAGCAAGGACAAACATGAAAATGCTTAAAAAAAAGAAAGCGCTTAAAACAAA 3996
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3997 GAAATAGAAGGTAATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACAT 4070
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4071 GGATGTATTCGTTTCTGATCATGAGAAGAGGCTCTTGTCATACATATCGTTCCATTTTTATTTTAAAGTTCTAT 4144
Query 613 --------------------------------------------------------------- 612
Sbjct 4145 AAACTTCTGAGGTAAACTGATTTCTTGGATGTACTTAATAAAGAATAAATGTTTCATATTGGA 4207
