Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14312
- Subject:
- NR_149157.2
- Aligned Length:
- 4639
- Identities:
- 611
- Gaps:
- 4027
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACCTGCAGAGTGAAGAAAGCTGGTAATAGATGTCTGACAAACTAAAGAAAGACTTGTGTTACGATGCAAAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTGTTCCTGGGTGTGTCTGTGAGAGTATTGCCAAAGGAGAGCAGTGAACTGGGAAAAGCAGACCCACCTCAAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGGTGGGCAACATCCAATCGGCTGCCAGCTAGAATAAACCAGGCAGGAGAAGATGGAAGAGCCGACTTGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATCTTCCAGCCTTCATCTTTCTCGTGTGCTGGATGCTTCCTGCCCTCAAACATCAGACTCCAGGTTCTTCGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTGGACTCTCGGATTTACATCAGTGGTTTACCAGGTGCTCTCAGGCCTTCAGCCACACACTGAAGGCTGAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTCGGCTTCCCGACTTTTGAGATTTTGAAACTTGGACTGAGCTACTGCTGGCTTCCTTGCTTCTCAACTTACA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGGGACTTCACCTATAGATCATGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAACAGAGGGCAAGAAAATTGGATGCAGTAAGTTGTCAGCATTTTTACTTATTTGGAAATTGTGGCTGCAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAGAACACTACATGAAACAAAGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCT 1110
Query 1 ---ATGGAACAGGAGGATAATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGT 71
|||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGT 1184
Query 72 GCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACA 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACA 1258
Query 146 AGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAA 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAA 1332
Query 220 AAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACG 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACG 1406
Query 294 TGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACA 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACA 1480
Query 368 AAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGC 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGC 1554
Query 442 CATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGT 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGT 1628
Query 516 GTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACA 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACA 1702
Query 590 TCTTACGTACTCCATGGGGGATT--------------------------------------------------- 612
|||||||||||||||||||||||
Sbjct 1703 TCTTACGTACTCCATGGGGGATTTAGTCTTTAATAATACATATGTCATCAACACTAAGCATTTTATTGGAGAGA 1776
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1777 TGATATCAATGTAAAGGATGATCAAACACTGGAATATATTTTCCTAGGACTTCCTTTATTCTGGTTTCTTGTTT 1850
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1851 GTTTGTTTTGTTTTGTTTTGTTTTCTCAAAAATGTTGAATTTGGAAAGAGAACTATCCAGAAAGATAGATGTAG 1924
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1925 GGGTGTGTTAGTGTTTGTGCATGTGTATGCCTGTTCACATGTCCTTACATTTGTAAAGATATCTTTTTGGTTTA 1998
Query 613 -------------------------------------------------------------------------- 612
Sbjct 1999 TTACTTATCTTGCGTATATTTTAGAGGTCATTTTTTATTAACTTCAGTAGGAAAGTTACATCTGCATCAAACAA 2072
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2073 TATGGCAACATCTATTTATTAACCAAGTTTCCTGTCCTTTCACATTGTTTTTTGCTACCTCTTCCTCAGAATAT 2146
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2147 ATTTGCCACCATGGTCAATTTGATAAATTAGAATTGGGCCCAAAGCCAGTGAGATAATTCAATGTGTTTTTAAC 2220
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2221 ACATGAAAATATTAAAGGATATGCAAGAGAAATTTTTCAAGCAGTGTGATTATAGATGTTTTCTGTATATAGAA 2294
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2295 TATTTCAAATGATGGAGGTTTACCCCATGATGCTCATTTAAATACTGACTTGTCTTTTAAATCTGTCTTCTAAA 2368
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2369 TTATGTACTGTTGTTGGTTAAATAGAGCACAATGTAGTTATTCTAATGCCCAGTTGTATTTGTTCTTTTATTCT 2442
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2443 GCTTTTTAACTGTAATCCTTTTTACCAGCATACGATTGTTATTGAGCAATATGAAAGGGAAATGTTCTTTATTA 2516
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2517 AAATCAATACATTATCTTATTAAACAAAGATCCTAAAAGTATATTGTTGCATATATGAATCCAAGGAATAGTTC 2590
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2591 AGTAATTATTGCCTAAAATGTGAAAGCATATTTTGTATCCTAAAATGAATGTATGATATTCTAAACATCTGTTT 2664
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2665 TAGTATAACAAACAATTGAAACATTTCCTTCTAAATATATGTTATTTAATAGTTACATGTATTATAATCATTCT 2738
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2739 TTCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACTTTATGAGTTGTTTTCAACT 2812
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2813 TCATAATTTTAAATTTTCTATGTTAATATAACATAAATTAGAAAAAATAAGTGATTCAAAATGAAAATATTTAC 2886
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2887 TTTGTAGAATATGACTTTAGACATATCACTGTATCCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATG 2960
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2961 TGAACCCAACAAATTCAAAGTTGCACTTTTCAAGATGTGAGAAGGTACTAAAACTTAATACTAAAACATGAGAG 3034
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3035 GGAAAATATGTGTAAACCTCTAGTGCTATTTTCACTGGCTAAATTCTTTATTTCTTGATTTTTTTAAAAATTAG 3108
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3109 GTTATTAAAATTAAAACAATATGCTAGAAGACATTTTGGCAGAAATAAGTCTATAACACTATTTTTGTCACATA 3182
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3183 TCTTTTTCTTGGAAAAATTTATCCAACTATAGACATCTTAAACCCTACAAATTGTTCTTGTTAAAAATGACTAA 3256
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3257 TACTGGGGGTGCTCAATATGCATATAGTGTTTTTCATTGATAATTTTTATTTAGTTCTTAAGAAACCTGTTCTT 3330
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3331 AATGTTGGCATGTCACATTTTTCTGTTACTATAATCAGAAAATGTATAGTCTGTTATACTGTAAAAAAAAAAAA 3404
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3405 AAAGGGAAGCTACTTTTGGAATGTAACGTGTTAACATGACAGCATACTCTTAGTATTAATCTTAATCTTCCTAA 3478
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3479 CATAAGCATTCACATGTGGTTATTTGTAGGAAATAGCTCTATTTATGAGATTTTTTTTGGTGTATTTTGTTAGA 3552
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3553 ATTGGTGACACAGTAAATCATTCTGCTTTTGGATTTGCCTGACTGCCTGCATTCTTCTTTGATTTTGGTATAGT 3626
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3627 AAAATCTGTTATTTAGTGTTAAACTTAATAAAAGAGCATTTAAGAGAAGTGACATTTCAAACATCCACAACACA 3700
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3701 ACTGACTTTTGAAATCCTATGCTTAATAGTCTTTGTAATTCTAAAAGACCTTTTGAAAATGTTAAAATATTAAA 3774
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3775 TTATATGTTGTAATGCTGTTACATGAATTTTATAGTTATGTATATTTTATAGATCTCTATGTCTTTGTAAGTTA 3848
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3849 CTTGCTTGTATGCTATATAATTGCTTTCTCAGTTAACCATACTGTTTATGGAATTGTATATACTGATTTTTCTG 3922
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3923 TTTTTATATTTTAAAAATAAAAGTTGAGAATTTTAAGGAAAAACATTTTATTAAAAAGACAAGGTATATTATAT 3996
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3997 AGGAATTTTAAGCTAACTTTTAATGGAAAGGACATACATATTTGCATGATGGAGCAATCACATTATAGTTAAAC 4070
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4071 ATGTATGTCCCTGTTTTAAATTTTATAGTATATAAATATATGTGCTAATGAACCAGCGACTCTGCATAGAGGCA 4144
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4145 GTCACTTAGAGTAATTAATAATCTTGATACAGCTGTAGATCATATCTTATTTTACATATTACTTTTGACTTCCA 4218
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4219 GTTTAAGTTGTTTGTTATCAAGTATTTCAGGAGAGAATTGTGTACATTAGGCTATGTTTACTGCAGATTATGTA 4292
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4293 ACATGCTTTTATGAGATTATAGTTTGTAGTGCTTGCAAATATAAAACATGTACCCTGATAAACTATAATCACTA 4366
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4367 CTAGGTTGACCAGCAAGGACAAACATGAAAATGCTTAAAAAAAAGAAAGCGCTTAAAACAAAGAAATAGAAGGT 4440
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4441 AATGGGCATATATAAAATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGT 4514
Query 613 -------------------------------------------------------------------------- 612
Sbjct 4515 TTCTGATCATGAGAAGAGGCTCTTGTCATACATATCGTTCCATTTTTATTTTAAAGTTCTATAAACTTCTGAGG 4588
Query 613 --------------------------------------------------- 612
Sbjct 4589 TAAACTGATTTCTTGGATGTACTTAATAAAGAATAAATGTTTCATATTGGA 4639
