Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14312
- Subject:
- XR_944789.1
- Aligned Length:
- 3585
- Identities:
- 611
- Gaps:
- 2973
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACGCGGGCCTGGACTGTCTAGACTGTCCTGTCTAAAGCTTTCTGAATGCGGTTTTTGGAGGAATCGCGCTAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTATACCTTTTCCAACTCTTCTAACTCTGGACCTCTTCTTACCGAGCTTGTTAGGTGAAATCAGGCTGACTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCTTGTGCCCCTCGCCTGTCCTGTCCAGGAATCCCAGTTAGGTAGGGGATGGGGAATTCCTTCTGCTACACTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGTATACTGCATGATAAACACAGGAACTCAAATGGATTTAGAGGTTAAAGGAGTTGCTGCCACTTCTAGGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAATTCAGCCATTCTTTGGAAGAAAGAAGCCTCTACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTTGCCCACCAGTGGTCCCACGACTTGATTTGGGAAGCCTTGTTGACTCTGATGATGAGGACAATTTTTCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATATTCCACTTAGTACAGCAAACCTGCCAAATTCATCTTCTACTCTTGGCTGGGTCACACCATGTCAAACTCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TATACTCAGTATCATCTAAATAAATTGGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAAACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATACAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCACGTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGGACGTGATGCTTGCAGAGAGCTCATTGGGTTCTTTTTCACTCATGACCAATCCCTTACAATTTATGAATAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGACAATTTGGGAAAAATAGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGACG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTG 1406
Query 1 ---------------------ATGGAACAGGAGGATAATATAATCATTCAAGAAACCAATGATAGGCTGGTCTT 53
|||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1407 GATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTT 1480
Query 54 CAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAAT 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAAT 1554
Query 128 ATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTT 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTT 1628
Query 202 CACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGA 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGA 1702
Query 276 TTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTA 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTA 1776
Query 350 TGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCAT 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCAT 1850
Query 424 TCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTG 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TCTCAAGTAATTTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTG 1924
Query 498 CAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CAGCAAGTCTGATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATG 1998
Query 572 ATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATT--------------------------------- 612
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ATGAAGACTTTGTTAACATCTTACGTACTCCATGGGGGATTTAGTCTTTAATAATACATATGTCATCAACACTA 2072
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2073 AGCATTTTATTGGAGAGATGATATCAATGTAAAGGATGATCAAACACTGGAATATATTTTCCTAGGACTTCCTT 2146
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2147 TATTCTGGTTTCTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTCTCAAAAATGTTGAATTTGGAAAGAGAACTAT 2220
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2221 CCAGAAAGATAGATGTAGGGGTGTGTTAGTGTTTGTGCATGTGTATGCCTGTTCACATGTCCTTACATTTGTAA 2294
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2295 AGATATCTTTTTGGTTTATTACTTATCTTGCGTATATTTTAGAGGTCATTTTTTATTAACTTCAGTAGGAAAGT 2368
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2369 TACATCTGCATCAAACAATATGGCAACATCTATTTATTAACCAAGTTTCCTGTCCTTTCACATTGTTTTTTGCT 2442
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2443 ACCTCTTCCTCAGAATATATTTGCCACCATGGTCAATTTGATAAATTAGAATTGGGCCCAAAGCCAGTGAGATA 2516
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2517 ATTCAATGTGTTTTTAACACATGAAAATATTAAAGGATATGCAAGAGAAATTTTTCAAGCAGTGTGATTATAGA 2590
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2591 TGTTTTCTGTATATAGAATATTTCAAATGATGGAGGTTTACCCCATGATGCTCATTTAAATACTGACTTGTCTT 2664
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2665 TTAAATCTGTCTTCTAAATTATGTACTGTTGTTGGTTAAATAGAGCACAATGTAGTTATTCTAATGCCCAGTTG 2738
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2739 TATTTGTTCTTTTATTCTGCTTTTTAACTGTAATCCTTTTTACCAGCATACGATTGTTATTGAGCAATATGAAA 2812
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2813 GGGAAATGTTCTTTATTAAAATCAATACATTATCTTATTAAACAAAGATCCTAAAAGTATATTGTTGCATATAT 2886
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2887 GAATCCAAGGAATAGTTCAGTAATTATTGCCTAAAATGTGAAAGCATATTTTGTATCCTAAAATGAATGTATGA 2960
Query 613 -------------------------------------------------------------------------- 612
Sbjct 2961 TATTCTAAACATCTGTTTTAGTATAACAAACAATTGAAACATTTCCTTCTAAATATATGTTATTTAATAGTTAC 3034
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3035 ATGTATTATAATCATTCTTTCTAAATTCTTTGCTAGTCATTTCTTCCTGGGAATACAGAGAAAAGAGACAACTT 3108
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3109 TATGAGTTGTTTTCAACTTCATAATTTTAAATTTTCTATGTTAATATAACATAAATTAGAAAAAATAAGTGATT 3182
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3183 CAAAATGAAAATATTTACTTTGTAGAATATGACTTTAGACATATCACTGTATCCATCTATACTTGGCAGCAACA 3256
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3257 TGAGAAGTGTGATACATGTGAACCCAACAAATTCAAAGTTGCACTTTTCAAGATGTGAGAAGGTTGACCAGCAA 3330
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3331 GGACAAACATGAAAATGCTTAAAAAAAAGAAAGCGCTTAAAACAAAGAAATAGAAGGTAATGGGCATATATAAA 3404
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3405 ATAAGCCAAGCAAGAGAAGAGCAAAGACAATCTGCAGGGTGGACATGGATGTATTCGTTTCTGATCATGAGAAG 3478
Query 613 -------------------------------------------------------------------------- 612
Sbjct 3479 AGGCTCTTGTCATACATATCGTTCCATTTTTATTTTAAAGTTCTATAAACTTCTGAGGTAAACTGATTTCTTGG 3552
Query 613 --------------------------------- 612
Sbjct 3553 ATGTACTTAATAAAGAATAAATGTTTCATATTG 3585
