Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14547
Subject:
NM_009744.4
Aligned Length:
2126
Identities:
1873
Gaps:
23

Alignment

Query    1  ATGGCCTCGCCGGCTGACAGCTGTATCCAGTTCACCCGCCATGCCAGTGATGTTCTTCTCAACCTTAATCGTCT  74
            ||||||||.|||||||||||||||||||||||.|||||.||.||.||||||||||||||||||||||||||.||
Sbjct    1  ATGGCCTCCCCGGCTGACAGCTGTATCCAGTTTACCCGGCACGCTAGTGATGTTCTTCTCAACCTTAATCGCCT  74

Query   75  CCGGAGTCGAGACATCTTGACTGATGTTGTCATTGTTGTGAGCCGTGAGCAGTTTAGAGCCCATAAAACGGTCC  148
            |||||||||.|||||||||||.||.||||||||.||.|||||||||||||||||||||||||||||.||.||.|
Sbjct   75  CCGGAGTCGGGACATCTTGACGGACGTTGTCATCGTGGTGAGCCGTGAGCAGTTTAGAGCCCATAAGACAGTGC  148

Query  149  TCATGGCCTGCAGTGGCCTGTTCTATAGCATCTTTACAGACCAGTTGAAATGCAACCTTAGTGTGATCAATCTA  222
            |||||||||||||.|||||||||||.||.|||||.||.||||||||||||||||||||||||||.|||||||||
Sbjct  149  TCATGGCCTGCAGCGGCCTGTTCTACAGTATCTTCACTGACCAGTTGAAATGCAACCTTAGTGTAATCAATCTA  222

Query  223  GATCCTGAGATCAACCCTGAGGGATTCTGCATCCTCCTGGACTTCATGTACACATCTCGGCTCAATTTGCGGGA  296
            ||||||||.||||.|||||||||.||.||||||||||||||||||||||||||||||.|||||||..||.||||
Sbjct  223  GATCCTGAAATCAGCCCTGAGGGGTTTTGCATCCTCCTGGACTTCATGTACACATCTAGGCTCAACCTGAGGGA  296

Query  297  GGGCAACATCATGGCTGTGATGGCCACGGCTATGTACCTGCAGATGGAGCATGTTGTGGACACTTGCCGGAAGT  370
            .|||||.||||||||.||||||.||||.||.||||||||||||||||||||||||||.|||||.|||.||||||
Sbjct  297  AGGCAATATCATGGCGGTGATGACCACAGCCATGTACCTGCAGATGGAGCATGTTGTCGACACATGCAGGAAGT  370

Query  371  TTATTAAGGCCAGTGAAGCAGAGATGGTTTCTGCCATCAAGCCTCCTCGTGAAGAGTTCCTCAACAGCCGGATG  444
            |.||.|||||||||||||||||.||||...||||..|.||.|||||.||||||||||||||.||||||||||||
Sbjct  371  TCATCAAGGCCAGTGAAGCAGAAATGGCCCCTGCACTTAAACCTCCCCGTGAAGAGTTCCTGAACAGCCGGATG  444

Query  445  CTGATGCCCCAAGACATCATGGCCTATCGGGGTCGTGAGGTGGTGGAGAACAACCTGCCACTGAGGAGCGCCCC  518
            |||||||||||.||||||||||||||.||.|||||||||||.|||||||||||..||||||||||.|...|.||
Sbjct  445  CTGATGCCCCATGACATCATGGCCTACCGAGGTCGTGAGGTCGTGGAGAACAATATGCCACTGAGAAATACTCC  518

Query  519  TGGGTGTGAGAGCAGAGCCTTTGCCCCCAGCCTGTACAGTGGCCTGTCCGCACCGCCAGCCTCTTATTCCATGT  592
            .|||||||||||||||||.|||||.||....|||||||||||||||||..||||.||||||||||||.||||||
Sbjct  519  CGGGTGTGAGAGCAGAGCTTTTGCTCCTCCTCTGTACAGTGGCCTGTCAACACCACCAGCCTCTTATCCCATGT  592

Query  593  ACAGCCACCTCCCTGTCAGCAGCCTCCTCTTCTCCGATGAGGAGTTTCGGGATG---TCCGGATGCCTGTGGCC  663
            |||||||.|||||..||||||.|.||||||||||.|||||||||.|.||.||||   .|||.||||||||||||
Sbjct  593  ACAGCCATCTCCCGCTCAGCACCTTCCTCTTCTCTGATGAGGAGCTCCGAGATGCCCCCCGAATGCCTGTGGCC  666

Query  664  AACCCCTTCCCCAAGGAGCGGGCACTCCCATGTGATAGTGCCAGGCCAGTCCCTGGTGAGTACAGCCGGCCGAC  737
            |||||.||.|||||||||||.||.|||||.||.||.||||||||||.|||||||..||||||.|||.||||..|
Sbjct  667  AACCCTTTTCCCAAGGAGCGTGCCCTCCCCTGCGACAGTGCCAGGCAAGTCCCTAATGAGTATAGCAGGCCAGC  740

Query  738  TTTGGAGGTGTCCCCCAATGTGTGCCACAGCAATATCTATTCACCCAAGGAAACAATCCCAGAAGAGGCACGAA  811
            ..|||||||||||||||.|.||||.||||||||.|||||.||.||||||||..||.|||||||.|||||.||.|
Sbjct  741  CATGGAGGTGTCCCCCAGTTTGTGTCACAGCAACATCTACTCGCCCAAGGAGGCAGTCCCAGAGGAGGCTCGGA  814

Query  812  GTGATATGCACTACAGTGTGGCTGAGGGCCTCAAACCTGCTGCCCCCTCAGCCCGAAATGCCCCCTACTTCCCT  885
            ||||.||.||||||||||||.|||||||||.|||.|||||||.|||.||.||.||.|||||.||.||||||||.
Sbjct  815  GTGACATACACTACAGTGTGCCTGAGGGCCCCAAGCCTGCTGTCCCTTCTGCTCGGAATGCTCCATACTTCCCC  888

Query  886  TGTGACAAGGCCAGCAAAGAAGAAGAGAGACCCTCCTCGGAAGATGAGATTGCCATGCATTTCGAGCCCCCCAA  959
            ||||||||.|||||||||||||||||||||||.||.|||||.||||||||||||.|||||||||||||||||||
Sbjct  889  TGTGACAAAGCCAGCAAAGAAGAAGAGAGACCTTCTTCGGAGGATGAGATTGCCCTGCATTTCGAGCCCCCCAA  962

Query  960  TGCACCCCTGAACCGGAAGGGTCTGGTTAGTCCACAGAGCCCCCAGAAATCTGACTGCCAGCCCAACTCGCCCA  1033
            |||||||.|||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||.||||
Sbjct  963  TGCACCCTTGAACCGGAAGGGTCTGGTTAGTCCCCAGAGTCCCCAGAAATCCGACTGCCAGCCCAACTCACCCA  1036

Query 1034  CAGAGTCCTGCAGCAGTAAGAATGCCTGCATCCTCCAGGCTTCTGGCTCCCCTCCAGCCAAGAGCCCCACTGAC  1107
            ||||||||||||||||.|||||.|||||||||||.|||||.||||||||.||.|||||||||||||||||||||
Sbjct 1037  CAGAGTCCTGCAGCAGCAAGAACGCCTGCATCCTTCAGGCCTCTGGCTCTCCGCCAGCCAAGAGCCCCACTGAC  1110

Query 1108  CCCAAAGCCTGCTTGCCAACT--------------TTC-TTGTACTCAACAGCCTCAACCAGAATGCCAAACCA  1166
            ||.||||||||     |||||              ||| |.||.||||||||||||||.||||||||||||||.
Sbjct 1111  CCGAAAGCCTG-----CAACTGGAAGAAGTATAAGTTCATCGTTCTCAACAGCCTCAATCAGAATGCCAAACCC  1179

Query 1167  GAGGGGCCTGAGCAGGCTGAGCTGGGCCGCCTTTCCCCACGAGCCTACACGGCCCCACCTGCCTGCCAGCCACC  1240
            |||||..||||||||||.||||||||.|||||.|||||.|||||||||.|.||.||.||.||.||||||||.||
Sbjct 1180  GAGGGCTCTGAGCAGGCAGAGCTGGGTCGCCTCTCCCCTCGAGCCTACCCTGCACCGCCCGCTTGCCAGCCGCC  1253

Query 1241  CATGGAGCCTGAGAACCTTGACCTCCAGTCCCCAACCAAGCTGAGTGCCAGCGGGGAGGACTCCACCATCCCAC  1314
            .||||||||.|.|||||||||.|||||||||||.||||||||.||||||||.|||||||||||.||||||||.|
Sbjct 1254  TATGGAGCCCGCGAACCTTGATCTCCAGTCCCCGACCAAGCTCAGTGCCAGTGGGGAGGACTCTACCATCCCCC  1327

Query 1315  AAGCCAGCCGGCTCAATAACATCGTTAACAGGTCCATGACGGGCTCTCCCCGCAGCAGCAGCGAGAGCCACTCA  1388
            |||||||||||||||||||..||||.|||||||||.||.|.|||||.|||||.||||||||.|||||.||||||
Sbjct 1328  AAGCCAGCCGGCTCAATAATCTCGTGAACAGGTCCCTGGCAGGCTCCCCCCGAAGCAGCAGTGAGAGTCACTCA  1401

Query 1389  CCACTCTACATGCACCCCCCGAAGTGCACGTCCTGCGGCTCTCAGTCCCCACAGCATGCAGAGATGTGCCTCCA  1462
            ||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1402  CCACTCTACATGCACCCCCCAAAGTGCACATCCTGCGGCTCTCAGTCCCCACAGCATACAGAGATGTGCCTCCA  1475

Query 1463  CACCGCTGGCCCCACGTTCCCTGAGGAGATGGGAGAGACCCAGTCTGAGTACTCAGATTCTAGCTGTGAGAACG  1536
            .||.|||||.|||||||||||.|||||||||||.||.||||||||.|||||.||.|||||||||||||||||.|
Sbjct 1476  TACTGCTGGGCCCACGTTCCCGGAGGAGATGGGGGAAACCCAGTCAGAGTATTCGGATTCTAGCTGTGAGAATG  1549

Query 1537  GGGCCTTCTTCTGCAATGAGTGTGACTGCCGCTTCTCTGAGGAGGCCTCACTCAAGAGGCACACGCTGCAGACC  1610
            ||.|||||||||||||.||.|||||||||||.|||||||||||||||||.|||||||||||||||||||||||.
Sbjct 1550  GGACCTTCTTCTGCAACGAATGTGACTGCCGTTTCTCTGAGGAGGCCTCGCTCAAGAGGCACACGCTGCAGACG  1623

Query 1611  CACAGTGACAAACCCTACAAGTGTGACCGCTGCCAGGCCTCCTTCCGCTACAAGGGCAACCTCGCCAGCCACAA  1684
            ||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1624  CACAGTGACAAACCATACAAATGTGATCGCTGCCAGGCCTCCTTCCGCTACAAGGGCAACCTCGCCAGCCACAA  1697

Query 1685  GACCGTCCATACCGGTGAGAAACCCTATCGTTGCAACATCTGTGGGGCCCAGTTCAACCGGCCAGCCAACCTGA  1758
            |||.|||||.||.|||||||||||||||||.||.|||||.|||||.||.||||||||.||||||||||||||||
Sbjct 1698  GACTGTCCACACGGGTGAGAAACCCTATCGCTGTAACATTTGTGGAGCGCAGTTCAATCGGCCAGCCAACCTGA  1771

Query 1759  AAACCCACACTCGAATTCACTCTGGAGAGAAGCCCTACAAATGCGAAACCTGCGGAGCCAGATTTGTACAGGTG  1832
            |.||||||||||||||||||||||||||.||||||||||||||.||||||||.||.|||||.|||||.||||||
Sbjct 1772  AGACCCACACTCGAATTCACTCTGGAGAAAAGCCCTACAAATGTGAAACCTGTGGGGCCAGGTTTGTTCAGGTG  1845

Query 1833  GCCCACCTCCGTGCCCATGTGCTTATCCACACTGGTGAGAAGCCCTATCCCTGTGAAATCTGTGGCACCCGTTT  1906
            |||||||||||||||||.|||||.|||||||||||.||||||||.||.||||||||||||||||||||.||.||
Sbjct 1846  GCCCACCTCCGTGCCCACGTGCTCATCCACACTGGAGAGAAGCCGTACCCCTGTGAAATCTGTGGCACTCGCTT  1919

Query 1907  CCGGCACCTTCAGACTCTGAAGAGCCACCTGCGAATCCACACAGGAGAGAAACCTTACCATTGTGAGAAGTGTA  1980
            |||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1920  CCGGCACCTTCAGACTCTGAAGAGCCATCTGCGCATCCACACAGGAGAGAAACCTTACCATTGTGAGAAGTGTA  1993

Query 1981  ACCTGCATTTCCGTCACAAAAGCCAGCTGCGACTTCACTTGCGCCAGAAGCATGGCGCCATCACCAACACCAAG  2054
            |||||||.||.||||||||||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||
Sbjct 1994  ACCTGCACTTTCGTCACAAAAGCCAACTGCGACTTCATTTGCGCCAGAAGCACGGCGCCATCACCAACACCAAG  2067

Query 2055  GTGCAATACCGCGTGTCAGCCACTGACCTGCCTCCGGAGCTCCCCAAAGCCTGC  2108
            |||||||||||||||||.|||.||||||||||||||||||||||||||||||||
Sbjct 2068  GTGCAATACCGCGTGTCGGCCGCTGACCTGCCTCCGGAGCTCCCCAAAGCCTGC  2121

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