Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14570
- Subject:
- XM_006538512.3
- Aligned Length:
- 2360
- Identities:
- 1451
- Gaps:
- 667
Alignment
Query 1 ATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGCATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAACGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCATTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGCAGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGGGAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTAC 666
|||||.|||||.|||
Sbjct 1 -----------------------------------------------------------ATGAGGGAGGAGTAC 15
Query 667 AGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAGCCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGA 740
||.||.||.|.|||.|...||||||||||.||||||||.|...||||.||..|.|||||.||.|||.|||||||
Sbjct 16 AGTGATAAGGGGAAGGTTGGCCACTGGAGCCGCAGCCCTCTGAGGCCACCAAGAGAGCGCTTTGAGATGGGAGA 89
Query 741 CGGCCGGGAAGCCAGTAAAAG-AGAGAAAATGGAAGAAAGGGACCTGCTGTCCGACTTACAGGACATCAGCGAC 813
|..|| ||||||||||||||| ||||||..|||||||.||.|||.||.||||.|||.|.||.||||||||.|||
Sbjct 90 CAACC-GGAAGCCAGTAAAAGAAGAGAAGGTGGAAGAGAGAGACTTGTTGTCAGACCTCCAAGACATCAGTGAC 162
Query 814 AGCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCAGCAGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGAGGA 887
|||||||||||.||||||||.||.|||||.||.||||||||||||||||||||||||||.||.||.||||||||
Sbjct 163 AGCGAGAGGAAAACCAGCTCAGCTGAGTCTTCATCAGCAGAATCAGGCTCAGGTTCTGAAGAGGAGGAGGAGGA 236
Query 888 GGAGGAAGAG---GAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAG---GAGGAGGAGGAGGAAGAGGAAG 955
.||.|||||| ||.||.||.||||||||||||||||||||||||||| ||.|||||.||.||||||||.|
Sbjct 237 AGAAGAAGAGGAAGAAGAAGAAGAAGGGAGCACCAGTGAAGAATCAGAGGAAGAAGAGGAAGAAGAAGAGGAGG 310
Query 956 AGGAGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAGAGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAA 1029
||||.||.||||||||.||.|||||||||||||||||.||.||.|||||.||.||||||||.|||||.||.|||
Sbjct 311 AGGAAGAAGAGGAGACTGGGAGCAACTCTGAGGAGGCCTCTGAACAGTCCGCAGAAGAAGTCAGTGATGAGGAA 384
Query 1030 ATGAGTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCACGGTTCGACCGAGATTC 1103
|||||||||||||||||..|||||||.||.||||||.||||||||||||||||||||||.||.|||||||||||
Sbjct 385 ATGAGTGAAGATGAAGACAGAGAAAACGAGAACCACATCTTGGTTGTTCCAGAGTCACGATTTGACCGAGATTC 458
Query 1104 CGGGGAGAGTGAAGAAGCAGAGGAAGAAGTGGGTGAGGGAACGCCGCAGAGCAGCGCCCTGACAGAGGGCGACT 1177
.|||||.||||||||||..|||||||||||.|||||.||.||.||.||||||||.||||..||.||.||.||||
Sbjct 459 TGGGGACAGTGAAGAAGGGGAGGAAGAAGTTGGTGAAGGGACTCCACAGAGCAGTGCCCCCACCGAAGGAGACT 532
Query 1178 ATGTGCCCGACTCCCCTGCCCTGTCGCCCATCGAGCTCAAGCAGGAGCTGCCCAAGTACCTGCCGGCCCTGCAG 1251
||||.||.|||||.||.||.|||||.||.||.|||||.||.||.||.||||||||.||||||||.|||||||||
Sbjct 533 ATGTTCCTGACTCTCCAGCACTGTCACCTATTGAGCTAAAACAAGAACTGCCCAAATACCTGCCAGCCCTGCAG 606
Query 1252 GGCTGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAGGAGGGCACCTATGGAGTGGTCTACAGAGC 1325
||.|||.||||.||.||||||||.|||||.|||||||||||.||.||.|||||||||||.||||||||||||||
Sbjct 607 GGATGCAGGAGTGTAGAGGAGTTTCAGTGTCTGAACAGGATTGAAGAAGGCACCTATGGGGTGGTCTACAGAGC 680
Query 1326 AAAAGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAAGATGGAGAAGGAGAAGGAGGGCTTCCCGA 1399
|||.|||||||||||||||||||||||||||||.||||||.|.||||||||||||||||||||.||||||||.|
Sbjct 681 AAAGGACAAGAAAACAGATGAAATTGTGGCTCTGAAGCGGTTAAAGATGGAGAAGGAGAAGGAAGGCTTCCCAA 754
Query 1400 TCACGTCGCTGAGGGAGATCAACACCATCCTCAAGGCCCAGCATCCCAACATCGTCACCGTTAGAGAGATTGTG 1473
||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.||.||.|||||.
Sbjct 755 TCACGTCGCTGAGGGAAATCAACACCATCCTCAAGGCCCAGCACCCCAACATCGTCACCGTCAGGGAAATTGTT 828
Query 1474 GTGGGCAGCAACATGGACAAGATCTACATCGTGATGAACTATGTGGAGCACGACCTCAAGAGCCTGATGGAGAC 1547
|||||.||.||||||||||||||||||||.|||||||||||.|||||.||.||||||||||||||.||||||||
Sbjct 829 GTGGGAAGTAACATGGACAAGATCTACATTGTGATGAACTACGTGGAACATGACCTCAAGAGCCTAATGGAGAC 902
Query 1548 CAGAAAACAGCCCCTTCCTGCCAAGGGGAGGTGAAGACCCCTGAGAATCCAGGTTGGTGCGTGGGGGTGAAACA 1621
||..||.||| ||||||||||| |||||||||||||| ||||||..||.|| |.||.||.|| |||||.||.||
Sbjct 903 CATGAAGCAG-CCCTTCCTGCC-AGGGGAGGTGAAGA-CCCTGATGATTCA-GCTGCTGAGT-GGGGTAAAGCA 971
Query 1622 CCTCCACGACAAACTGATCCCTGCACCGTGACCTCAAGACGTC-CACCTGGCTGCTGAGCCACGCCGGCATCCT 1694
||||||.|||||...||| |||.|||||||||||.|||||.|| .|||| .|||||||||||.||.|||||.||
Sbjct 972 CCTCCATGACAATTGGAT-CCTACACCGTGACCTGAAGACCTCTAACCT-CCTGCTGAGCCATGCTGGCATTCT 1043
Query 1695 CAAGGTGGGTGACTTCGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCCTACACCCCGGTCGTGGTGACCC 1768
|||||||||.|||||.||||||||.||||||||.||.||.||.||.|||||||||||.||.||.||.||.||||
Sbjct 1044 CAAGGTGGGCGACTTTGGGCTGGCTCGGGAGTATGGTTCACCCCTAAAGGCCTACACTCCAGTTGTTGTAACCC 1117
Query 1769 TGTGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGCCGTGGACATGTGGTCAGTGGGT 1842
|||||||.||.||||||||.||.|||||||||||.||||||||||||||.||.||||||||||||||.||.||.
Sbjct 1118 TGTGGTATCGTGCCCCAGAACTACTGCTTGGTGCTAAGGAATACTCCACAGCTGTGGACATGTGGTCGGTAGGC 1191
Query 1843 TGCATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAAGTCAGAAATCGATCAGATCAACAAGGT 1916
|||||.||.||.||.||||||||.|||||.|||||||||||.|||||||||||.||.||||||||.||||||.|
Sbjct 1192 TGCATATTTGGAGAACTGCTGACACAGAAACCTCTGTTCCCTGGGAAGTCAGATATTGATCAGATTAACAAGAT 1265
Query 1917 GTTCAAGGATCTGGGGACCCCTAGTGAGAAAATCTGGCCCGGCTACAGCGAGCTCCCAGCAGTCAAGAAGATGA 1990
.||||||||.|||||.||.||||||||||||||||||||.|||||.|..||.||||||||.|||||||||||||
Sbjct 1266 TTTCAAGGACCTGGGTACTCCTAGTGAGAAAATCTGGCCTGGCTATAATGACCTCCCAGCCGTCAAGAAGATGA 1339
Query 1991 CCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTC 2064
|||||||||||.|.|||||.|||||||||||||||.|.||.||||||.||.|.|||||.||.|||||.||.|||
Sbjct 1340 CCTTCAGCGAGTATCCCTATAACAACCTCCGCAAGAGATTTGGGGCTTTGTTATCAGATCAAGGCTTTGATCTC 1413
Query 2065 ATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCG 2138
|||||||||||||||||.||||.|||.||.||||||||||.|||.||.||.|||||||||||.||.||||||||
Sbjct 1414 ATGAACAAGTTCCTGACATACTACCCTGGCAGGAGGATCAACGCAGAAGATGGCCTCAAGCACGAATATTTCCG 1487
Query 2139 CGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGC 2212
.|||||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||||||||.|.|||||||
Sbjct 1488 AGAGACTCCCCTCCCCATCGACCCATCCATGTTCCCCACGTGGCCTGCCAAGAGTGAGCAGCAGAGAGTGAAGC 1561
Query 2213 GGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACG 2286
|.|||||.||.||..||||.||||||||.||||||||||||||||||||||||||.||.|||||||||||||||
Sbjct 1562 GAGGCACGAGTCCACGGCCTCCTGAGGGCGGCCTGGGCTACAGCCAGCTGGGTGATGATGACCTGAAGGAGACG 1635
Query 2287 GGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTC 2352
|||||||||||.||||||||.||||||||.|||||.||.||.|||||.||||||||||||||||||
Sbjct 1636 GGCTTCCACCTCACCACCACCAACCAGGGAGCCTCAGCTGCAGGCCCTGGCTTCAGCCTCAAGTTC 1701
