Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14570
- Subject:
- XM_017319934.1
- Aligned Length:
- 2353
- Identities:
- 1138
- Gaps:
- 1037
Alignment
Query 1 ATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGCATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAACGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCATTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGCAGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGGGAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTAC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAGCCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CGGCCGGGAAGCCAGTAAAAGAGAGAAAATGGAAGAAAGGGACCTGCTGTCCGACTTACAGGACATCAGCGACA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCAGCAGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGAGGAG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGAAGAATCAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAGAGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAAATGAGTG 1036
|||||||
Sbjct 1 -------------------------------------------------------------------ATGAGTG 7
Query 1037 AAGATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGGGGAG 1110
||||||||||..|||||||.||.||||||.||||||||||||||||||||||.||.|||||||||||.|||||.
Sbjct 8 AAGATGAAGACAGAGAAAACGAGAACCACATCTTGGTTGTTCCAGAGTCACGATTTGACCGAGATTCTGGGGAC 81
Query 1111 AGTGAAGAAGCAGAGGAAGAAGTGGGTGAGGGAACGCCGCAGAGCAGCGCCCTGACAGAGGGCGACTATGTGCC 1184
||||||||||..|||||||||||.|||||.||.||.||.||||||||.||||..||.||.||.||||||||.||
Sbjct 82 AGTGAAGAAGGGGAGGAAGAAGTTGGTGAAGGGACTCCACAGAGCAGTGCCCCCACCGAAGGAGACTATGTTCC 155
Query 1185 CGACTCCCCTGCCCTGTCGCCCATCGAGCTCAAGCAGGAGCTGCCCAAGTACCTGCCGGCCCTGCAGGGCTGCC 1258
.|||||.||.||.|||||.||.||.|||||.||.||.||.||||||||.||||||||.|||||||||||.|||.
Sbjct 156 TGACTCTCCAGCACTGTCACCTATTGAGCTAAAACAAGAACTGCCCAAATACCTGCCAGCCCTGCAGGGATGCA 229
Query 1259 GGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAGGAGGGCACCTATGGAGTGGTCTACAGAGCAAAAGAC 1332
||||.||.||||||||.|||||.|||||||||||.||.||.|||||||||||.|||||||||||||||||.|||
Sbjct 230 GGAGTGTAGAGGAGTTTCAGTGTCTGAACAGGATTGAAGAAGGCACCTATGGGGTGGTCTACAGAGCAAAGGAC 303
Query 1333 AAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAAGATGGAGAAGGAGAAGGAGGGCTTCCCGATCACGTC 1406
||||||||||||||||||||||||||.||||||.|.||||||||||||||||||||.||||||||.||||||||
Sbjct 304 AAGAAAACAGATGAAATTGTGGCTCTGAAGCGGTTAAAGATGGAGAAGGAGAAGGAAGGCTTCCCAATCACGTC 377
Query 1407 GCTGAGGGAGATCAACACCATCCTCAAGGCCCAGCATCCCAACATCGTCACCGTTAGAGAGATTGTGGTGGGCA 1480
|||||||||.||||||||||||||||||||||||||.|||||||||||||||||.||.||.|||||.|||||.|
Sbjct 378 GCTGAGGGAAATCAACACCATCCTCAAGGCCCAGCACCCCAACATCGTCACCGTCAGGGAAATTGTTGTGGGAA 451
Query 1481 GCAACATGGACAAGATCTACATCGTGATGAACTATGTGGAGCACGACCTCAAGAGCCTGATGGAGACCAGAAAA 1554
|.||||||||||||||||||||.|||||||||||.|||||.||.||||||||||||||.||||||||||..||.
Sbjct 452 GTAACATGGACAAGATCTACATTGTGATGAACTACGTGGAACATGACCTCAAGAGCCTAATGGAGACCATGAAG 525
Query 1555 CAGCCCCTTCCTGCCAAGGGGAGGTGAAGACCCCTGAGAATCCAGGTTGGTGCGTGGGGGTGAAACACCTCCAC 1628
||| ||||||||||| |||||||||||||| ||||||..||.|| |.||.||.|| |||||.||.||||||||.
Sbjct 526 CAG-CCCTTCCTGCC-AGGGGAGGTGAAGA-CCCTGATGATTCA-GCTGCTGAGT-GGGGTAAAGCACCTCCAT 594
Query 1629 GACAAACTGATCCCTGCACCGTGACCTCAAGACGTC-CACCTGGCTGCTGAGCCACGCCGGCATCCTCAAGGTG 1701
|||||...||| |||.|||||||||||.|||||.|| .|||| .|||||||||||.||.|||||.|||||||||
Sbjct 595 GACAATTGGAT-CCTACACCGTGACCTGAAGACCTCTAACCT-CCTGCTGAGCCATGCTGGCATTCTCAAGGTG 666
Query 1702 GGTGACTTCGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCCTACACCCCGGTCGTGGTGACCCTGTGGTA 1775
||.|||||.||||||||.||||||||.||.||.||.||.|||||||||||.||.||.||.||.|||||||||||
Sbjct 667 GGCGACTTTGGGCTGGCTCGGGAGTATGGTTCACCCCTAAAGGCCTACACTCCAGTTGTTGTAACCCTGTGGTA 740
Query 1776 CCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGCCGTGGACATGTGGTCAGTGGGTTGCATCT 1849
.||.||||||||.||.|||||||||||.||||||||||||||.||.||||||||||||||.||.||.|||||.|
Sbjct 741 TCGTGCCCCAGAACTACTGCTTGGTGCTAAGGAATACTCCACAGCTGTGGACATGTGGTCGGTAGGCTGCATAT 814
Query 1850 TCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAAGTCAGAAATCGATCAGATCAACAAGGTGTTCAAG 1923
|.||.||.||||||||.|||||.|||||||||||.|||||||||||.||.||||||||.||||||.|.||||||
Sbjct 815 TTGGAGAACTGCTGACACAGAAACCTCTGTTCCCTGGGAAGTCAGATATTGATCAGATTAACAAGATTTTCAAG 888
Query 1924 GATCTGGGGACCCCTAGTGAGAAAATCTGGCCCGGCTACAGCGAGCTCCCAGCAGTCAAGAAGATGACCTTCAG 1997
||.|||||.||.||||||||||||||||||||.|||||.|..||.||||||||.||||||||||||||||||||
Sbjct 889 GACCTGGGTACTCCTAGTGAGAAAATCTGGCCTGGCTATAATGACCTCCCAGCCGTCAAGAAGATGACCTTCAG 962
Query 1998 CGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTTCGACCTCATGAACA 2071
||||.|.|||||.|||||||||||||||.|.||.||||||.||.|.|||||.||.|||||.||.||||||||||
Sbjct 963 CGAGTATCCCTATAACAACCTCCGCAAGAGATTTGGGGCTTTGTTATCAGATCAAGGCTTTGATCTCATGAACA 1036
Query 2072 AGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGTATTTCCGCGAGACC 2145
||||||||||.||||.|||.||.||||||||||.|||.||.||.|||||||||||.||.||||||||.|||||.
Sbjct 1037 AGTTCCTGACATACTACCCTGGCAGGAGGATCAACGCAGAAGATGGCCTCAAGCACGAATATTTCCGAGAGACT 1110
Query 2146 CCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGCCCGCCAAGAGCGAGCAGCAGCGTGTGAAGCGGGGCAC 2219
|||||||||||||||||.||||||||||||||||||||.||||||||.|||||||||.|.||||||||.|||||
Sbjct 1111 CCCCTCCCCATCGACCCATCCATGTTCCCCACGTGGCCTGCCAAGAGTGAGCAGCAGAGAGTGAAGCGAGGCAC 1184
Query 2220 CAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAAGGAGACGGGCTTCC 2293
.||.||..||||.||||||||.||||||||||||||||||||||||||.||.||||||||||||||||||||||
Sbjct 1185 GAGTCCACGGCCTCCTGAGGGCGGCCTGGGCTACAGCCAGCTGGGTGATGATGACCTGAAGGAGACGGGCTTCC 1258
Query 2294 ACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTC 2352
||||.||||||||.||||||||.|||||.||.||.|||||.||||||||||||||||||
Sbjct 1259 ACCTCACCACCACCAACCAGGGAGCCTCAGCTGCAGGCCCTGGCTTCAGCCTCAAGTTC 1317
