Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14571
- Subject:
- NM_001313896.2
- Aligned Length:
- 2386
- Identities:
- 839
- Gaps:
- 1539
Alignment
Query 1 ATGGGTGATG-AAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 73
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 74
Query 74 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 148
Query 148 AGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAA 221
||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 149 AGGGGGAGCTGAGAGATCACTGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCAATGGAA 222
Query 222 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCA 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 223 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGTTCATCA 296
Query 296 CAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGCATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAG 369
||||||||||||||||||||||||.||| .|||||||||||||||
Sbjct 297 CAGAAAAGATGAAAAGAGAAAAGAAAAA------------------------------TGGAAGCATGCTAGAG 340
Query 370 TGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAACGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 443
|| |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 341 TG------AAAGAAAGAGAGCACGAACGTCGGAAACGACATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 408
Query 444 GAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCATTCCAGGAGAGAAAGGGACCGCTTGGAGC---------- 507
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 409 GAAAGACAGAAGAGAAGGGAAATGGCAAGGGAGCATTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAG 482
Query 508 -------------------------------------------------------------------------- 507
Sbjct 483 GAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGCAGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGG 556
Query 508 -------------------------------------------------------------------------- 507
Sbjct 557 CGGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGGGAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTAC 630
Query 508 -------------------------------------------------------------------------- 507
Sbjct 631 AGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAGCCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGA 704
Query 508 -------------------------------------------------------------------------- 507
Sbjct 705 CGGCCGGAAGCCAGGTGAGGCCAGGCCGGCGCCTGCGCAGAAGCCAGCACAGTTAAAAGAAGAGAAAATGGAAG 778
Query 508 -------------------------------------------------------------------------- 507
Sbjct 779 AAAGGGACCTGCTGTCCGACTTACAGGACATCAGCGACAGCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCA 852
Query 508 -------------------------------------------------------------------------- 507
Sbjct 853 GCGGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGA 926
Query 508 -------------------------------------------------------------------------- 507
Sbjct 927 AGAATCAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAG 1000
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1001 AGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAAATGAGTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTG 1074
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1075 GTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGGGGAGAGTGAAGAAGCAGAGGAAGAAGTGGGTGAGGGAAC 1148
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1149 GCCGCAGAGCAGCGCCCTGACAGAGGGCGACTATGTGCCCGACTCCCCTGCCCTGTTGCCCATCGAGCTCAAGC 1222
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1223 AGGAGCTGCCCAAGTACCTGCCGGCCCTGCAGGGCTGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATC 1296
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1297 GAGGAGGGCACCTATGGAGTGGTCTACAGAGCAAAAGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCT 1370
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1371 GAAGATGGAGAAGGAGAAGGAGGGCTTCCCGATCACGTCCCTGAGGGAGATCAACACCATCCTCAAGGCCCAGC 1444
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1445 ATCCCAACATTGTCACCGTTAGAGAGATTGTGGTGGGCAGCAACATGGACAAGATCTACATCGTGATGAACTAC 1518
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1519 GTGGAGCACGACCTCAAGAGCCTGATGGAGACCATGAAACAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGAT 1592
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1593 GATCCAGCTGCTGCGGGGGGTGAAACACCTGCACGACAACTGGATCCTGCACCGTGACCTCAAGACGTCCAACC 1666
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1667 TGCTGCTGAGCCACGCCGGCATCCTCAAGGTGGGTGATTTTGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAG 1740
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1741 GCCTACACCCCGGTCGTGGTGACCCAGTGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCAC 1814
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1815 GGCCGTGGACATGTGGTCAGTGGGCTGCATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAATT 1888
Query 508 -------------------------------------------------------------------------- 507
Sbjct 1889 CGGAAATCGATCAGATCAACAAAGTGTTCAAGGAGCTGGGGACCCCCAGTGAGAAAATCTGGCCCGGCTACAGT 1962
Query 508 -----------AGTCAAGAAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCT 570
||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1963 GAGCTCCCAGTAGTCAAAAAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCT 2036
Query 571 GCTCTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGG 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2037 GCTCTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGG 2110
Query 645 ACGGCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGGCCCGC 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2111 ACGGCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGT-GGCCCGC 2183
Query 719 CAAGAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGC 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2184 CAAGAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGC 2257
Query 793 TGGGTGACGACGACCTGAAGGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCC 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2258 TGGGTGACGACGACCTGAAGGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCC 2331
Query 867 GGCTTCAGCCTCAAGTTC 884
||||||||||||||||||
Sbjct 2332 GGCTTCAGCCTCAAGTTC 2349
