Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14578
• Subject: XM_006504839.4
• Aligned Length: 1418
• Identities: 1046
• Gaps: 227

Alignment

Query    1  ATGGACTATGACTTTAAAGTGAAGCTGAGCAGCGAGCGGGAGCGGGTCGAGGACCTGTTTGAATACGAGGGCTG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGACTATGACTTTAAAGTGAAGCTGAGCAGCGAGCGGGAGCGGGTCGAGGACCTGTTTGAATACGAGGGCTG  74

Query   75  CAAAGTTGGCCGAGGCACTTATGGTCACGTCTACAAAGCCAAGAGGAAAGATGGGAAGGATGATAAAGACTATG  148
            |||||||||.|||||||||||.||.|||||||||||.||.||||||||||||||||||||.|||||||||||.|
Sbjct   75  CAAAGTTGGTCGAGGCACTTACGGGCACGTCTACAAGGCGAAGAGGAAAGATGGGAAGGACGATAAAGACTACG  148

Query  149  CTTTAAAACAAATAGAAGGAACTGGGATCTCTATGTCGGCATGTAGAGAAATAGCATTACTTCGAGAGCTTAAG  222
            |||||||||||||||||||||||||.||.||||||||||||||.|||||.||||||                  
Sbjct  149  CTTTAAAACAAATAGAAGGAACTGGAATTTCTATGTCGGCATGCAGAGAGATAGCA------------------  204

Query  223  CATCCAAACGTCATTTCTCTTCAAAAGGTGTTTCTGTCTCATGCTGATAGGAAGGTGTGGCTTCTGTTTGACTA  296
                                                                                      
Sbjct  205  --------------------------------------------------------------------------  204

Query  297  TGCTGAACATGACCTCTGGCATATAATCAAGTTTCACAGAGCTTCTAAAGCAAACAAGAAGCCAGTTCAGTTAC  370
                               ||||||||.|||||||||||||||||.|||||.||||||||||||||||||||||
Sbjct  205  -------------------CATATAATTAAGTTTCACAGAGCTTCGAAAGCCAACAAGAAGCCAGTTCAGTTAC  259

Query  371  CTCGGGGAATGGTGAAGTCACTATTATATCAGATCCTAGATGGTATTCACTACCTGCATGCTAACTGGGTGTTG  444
            ||||||||||||||||||||||.||.||.||||||||||||||.||||||||.||.|||||.||||||||||||
Sbjct  260  CTCGGGGAATGGTGAAGTCACTGTTGTACCAGATCCTAGATGGGATTCACTATCTTCATGCCAACTGGGTGTTG  333

Query  445  CACAGAGATTTGAAACCTGCTAATATTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAAATTGCTGA  518
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  334  CACAGGGATTTGAAACCTGCTAATATTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAAATTGCTGA  407

Query  519  CATGGGCTTTGCCCGATTATTTAATTCACCTTTGAAGCCTTTAGCAGATTTGGATCCAGTGGTTGTTACATTCT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  408  CATGGGCTTTGCCCGATTATTTAATTCACCTTTGAAGCCTTTAGCAGATTTGGATCCAGTGGTTGTAACATTCT  481

Query  593  GGTACCGAGCCCCTGAACTACTTCTTGGAGCAAGGCATTATACCAAAGCTATTGATATTTGGGCTCTCGACAGC  666
            ||||||||||.||.|||.||||.||.|||||..|.||||||||||||||.|||||||||||||||.|.|...|.
Sbjct  482  GGTACCGAGCTCCAGAATTACTCCTCGGAGCGCGACATTATACCAAAGCAATTGATATTTGGGCTATAGGGTGT  555

Query  667  ATA----CAGCATGAA-TGCTAACGCTAATGGAC-------TCAC-GTCGACATGCCGTCGCAAGG-CATC--A  724
            |||    ||    ||| |.||||||..|  |.||       |||| |||||||.|        ||| ||||  |
Sbjct  556  ATATTTGCA----GAACTACTAACGTCA--GAACCAATATTTCACTGTCGACAAG--------AGGACATCAAA  615

Query  725  ACTAGT-ATCTATA----CATGA-CAGCT-GAC-GAA---TCAGTAT----GGATT--CTGCAGTAGATGTAGA  781
            |||||| |||..||    ||||| ||||| ||| |||   |||.|.|    |||||  ||||   ||||..|||
Sbjct  616  ACTAGTAATCCTTATCACCATGACCAGCTGGACAGAATATTCAATGTAATGGGATTCCCTGC---AGATAAAGA  686

Query  782  TT------------AAAAGATGCCTG-ACAT--CACAT--ATGAGA---TTCAGA--GAATACGTATACCAACT  833
            ||            ||||||||||.| ||||  .||||  ||||.|   ||||||  .||||||||||||||.|
Sbjct  687  TTGGGAAGATATAAAAAAGATGCCCGAACATTCAACATTAATGAAAGATTTCAGAAGAAATACGTATACCAATT  760

Query  834  GCAGCC-TATCAAGTATATG--AAAACATAAAGTT-AACCAGATAGTAAAGCATT-CACTTGC-TCAGAAGCTG  901
            |||||| |||||||||||||  |||.||||||||| ||||.|||||||||||||| ||||||| |||||||.||
Sbjct  761  GCAGCCTTATCAAGTATATGGAAAAGCATAAAGTTAAACCCGATAGTAAAGCATTCCACTTGCTTCAGAAGTTG  834

Query  902  CTTACCAT-GACCCAATAAAGCGAA-TACCTCAGA-CA-GCTATGCAGGACCCCTA-TTTCTAG-AGAC---CA  966
            ||.||.|| |||||||||||||||| ||||||||| || ||.|||||||||||||| ||.|||| ||||   |.
Sbjct  835  CTCACTATGGACCCAATAAAGCGAATTACCTCAGAGCAGGCCATGCAGGACCCCTACTTCCTAGAAGACCCACT  908

Query  967  TTCTACATCAGACGTTTTTGCCGG-TGTCAAATCC---TTCCCAAAACGGGAATTTT--ACCGAAGAGGA-CCT  1033
            |.|.||.|||||.|||||.||||| |||||.||||   .|||| |||||.|||||||  ||.|||||.|| |||
Sbjct  909  TCCCACGTCAGATGTTTTCGCCGGTTGTCAGATCCCATATCCC-AAACGAGAATTTTTAACAGAAGAAGAGCCT  981

Query 1034  GATGGCAAAGG-GACCAAAA----CAGGCGCCACAGGAAGGCCATTACCAACA-TAAAGGAACTGGCCCCCCCG  1101
            ||||..||||| |||.||||    |||..||..|||.|.|||.|..||| ||| |||.||||||||||..||.|
Sbjct  982  GATGAGAAAGGAGACAAAAAGACCCAGCAGCAGCAGCAGGGCAACAACC-ACACTAACGGAACTGGCCATCCGG  1054

Query 1102  GGAATCCAGG-CCGCCGTTCCCCCCCGGGGCCCCCGGTGAAGGAAATGAGAAGTGTTCCTCCTTCCCATACCTT  1174
            |||| ||||| |.||.|...|.|.|.|||||||||..||||..||.|||||..|||.||||||.||..|||| |
Sbjct 1055  GGAA-CCAGGACAGCGGCCACGCACAGGGGCCCCCCTTGAAAAAAGTGAGAGTTGTCCCTCCTACCACTACC-T  1126

Query 1175  CGGGGGGACT-ATCCAGGCCTTCGGCCATTAGGGGTTCCATTCC-CCTGCCGCCTATTCCCACCCCGGGCCCAG  1246
            |.||.||||| |||..|.|||.||.|.||.| |.||||||.||| |.|||.||.|| |||||.|||.||.|||.
Sbjct 1127  CAGGTGGACTCATCATGACCTCCGACTATCA-GCGTTCCAATCCACATGCTGCTTA-TCCCAACCCTGGACCAA  1198

Query 1247  CCCCTTCCCA-CCGCAGAGCCGCCAGGGATAATTCAG-TACCTTCCCA-CCGCCTTCCCCAG-ACTCCCCTTCG  1316
            .|.|.||.|| ||.||||||.||..||||| |.|||| |||| ||||| |.||| |||.||| ||||.|.|..|
Sbjct 1199  GCACATCACAGCCCCAGAGCAGCATGGGAT-ACTCAGCTACC-TCCCAGCAGCC-TCCACAGTACTCACATCAG  1269

Query 1317  GCCCATTGGGAA  1328
            .|.|||.||.|.
Sbjct 1270  ACACATCGGTAC  1281