Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14578
- Subject:
- XM_011534865.2
- Aligned Length:
- 1416
- Identities:
- 691
- Gaps:
- 631
Alignment
Query 1 ATGGACTATGACTTTAAAGTGAAGCTGAGCAGCGAGCGGGAGCGGGTCGAGGACCTGTTTGAATACGAGGGCTG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CAAAGTTGGCCGAGGCACTTATGGTCACGTCTACAAAGCCAAGAGGAAAGATGGGAAGGATGATAAAGACTATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTTTAAAACAAATAGAAGGAACTGGGATCTCTATGTCGGCATGTAGAGAAATAGCATTACTTCGAGAGCTTAAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CATCCAAACGTCATTTCTCTTCAAAAGGTGTTTCTGTCTCATGCTGATAGGAAGGTGTGGCTTCTGTTTGACTA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGCTGAACATGACCTCTGGCATATAATCAAGTTTCACAGAGCTTCTAAAGCAAACAAGAAGCCAGTTCAGTTAC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTCGGGGAATGGTGAAGTCACTATTATATCAGATCCTAGATGGTATTCACTACCTGCATGCTAACTGGGTGTTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CACAGAGATTTGAAACCTGCTAATATTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAAATTGCTGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CATGGGCTTTGCCCGATTATTTAATTCACCTTTGAAGCCTTTAGCAGATTTGGATCCAGTGGTTGTTACATTCT 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -ATGGGCTTTGCCCGATTATTTAATTCACCTTTGAAGCCTTTAGCAGATTTGGATCCAGTGGTTGTTACATTCT 73
Query 593 GGTACCGAGCCCCTGAACTACTTCTTGGAGCAAGGCATTATACCAAAGCTATTGATATTTGGGCTCTCGACAGC 666
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|...|.
Sbjct 74 GGTACCGAGCCCCTGAACTACTTCTTGGAGCAAGGCATTATACCAAAGCTATTGATATTTGGGCTATAGGGTGT 147
Query 667 ATA----CAGCATGAA-TGCTAACGCTAATGGAC-------TCAC-GTCGACATGCCGTCGCAAGG-CATC--A 724
||| || ||| |.||||||..| |.|| |||| |||||||.| ||| |||| |
Sbjct 148 ATATTTGCA----GAACTACTAACGTCA--GAACCAATATTTCACTGTCGACAAG--------AGGACATCAAA 207
Query 725 ACTAGT-ATCTATA----CATGA-CAGCT-GAC-GAA---TCAGTAT----GGATT--CTGCAGTAGATGTAGA 781
|||||| |||..|| ||||| ||||| ||| ||| |||.|.| ||||| |||| ||||..|||
Sbjct 208 ACTAGTAATCCTTATCACCATGACCAGCTGGACAGAATATTCAATGTAATGGGATTTCCTGC---AGATAAAGA 278
Query 782 TT------------AAAAGATGCCTG-ACAT--CACAT--ATGAGA---TTCAGA--GAATACGTATACCAACT 833
|| |||||||||||| |||| .|||| ||||.| |||||| .||||||||||||||||
Sbjct 279 TTGGGAAGATATAAAAAAGATGCCTGAACATTCAACATTAATGAAAGATTTCAGAAGAAATACGTATACCAACT 352
Query 834 GCAGCC-TATCAAGTATATG--AAAACATAAAGTT-AACCAGATAGTAAAGCATT-CACTTGC-TCAGAAGCTG 901
|||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||
Sbjct 353 GCAGCCTTATCAAGTATATGGAAAAACATAAAGTTAAACCAGATAGTAAAGCATTCCACTTGCTTCAGAAGCTG 426
Query 902 CTTACCAT-GACCCAATAAAGCGAA-TACCTCAG-ACA-GCTATGCAGGACCCCTATTTC-TAG-AGAC---CA 966
|||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||| |||| |.
Sbjct 427 CTTACCATGGACCCAATAAAGCGAATTACCTCAGAACAGGCTATGCAGGACCCCTATTTCTTAGAAGACCCACT 500
Query 967 TTCTACATCAGACGTTTTTGCCGG-TGTCAAATCC--TTCCCAAAACGGGAATTTT--ACCGAAG-AGGACCTG 1034
|.|||||||||||||||||||||| |||||||||| |.|||||||||.||||||| ||.|||| ||.|||||
Sbjct 501 TCCTACATCAGACGTTTTTGCCGGTTGTCAAATCCCTTACCCAAAACGAGAATTTTTAACGGAAGAAGAACCTG 574
Query 1035 ATGGCAAAGG-GACCAAAA----CAGGCGCCACAGGAAGGCCATTACCAACA-TAAAGGAACTGGCCCCCCCGG 1102
|||.|||||| |||.|||| |||..||..|||.|.|||.||.||| ||| |||.||||||||||.|||.||
Sbjct 575 ATGACAAAGGAGACAAAAAGAACCAGCAGCAGCAGCAGGGCAATAACC-ACACTAATGGAACTGGCCACCCAGG 647
Query 1103 GAATCCAGGCCGCCGTTCCCCCCCGGGGCCCCCGGTGAAGGAAATGAGAAGTGTTCCTCCTTCCCATACCTTCG 1176
|||||.||.|.||.||..|.|.|.|||.||||||.|||||.||.|||||..||||||||||.||..|||| ||.
Sbjct 648 GAATCAAGACAGCAGTCACACACAGGGACCCCCGTTGAAGAAAGTGAGAGTTGTTCCTCCTACCACTACC-TCA 720
Query 1177 GGGGGAC-TATCCAGGCCTTCGGCCATTAGGGGTTCCATTCC-CCTGCCGCCTATTCCCACCCCGGGCCCAGCC 1248
||.|||| ||||..|.|||..|.|.||.| |.||||||.||| |.|||.||||| |||||.|||.||.|||..|
Sbjct 721 GGTGGACTTATCATGACCTCAGACTATCA-GCGTTCCAATCCACATGCTGCCTA-TCCCAACCCTGGACCAAGC 792
Query 1249 CCTTCCCA-CCGCAGAGCCGCCAGGGATAATTCAG-TACCTTCCCA-CCGCCTTCCCCAG-ACTCCCCTTCGGC 1318
.|.||.|| |||||||||.||..||||| |.|||| |||| ||||| |.||| |||.||| ||||.|.|..|.|
Sbjct 793 ACATCACAGCCGCAGAGCAGCATGGGAT-ACTCAGCTACC-TCCCAGCAGCC-TCCACAGTACTCACATCAGAC 863
Query 1319 CCATTGGGAA 1328
.|||.||.|.
Sbjct 864 ACATCGGTAC 873
