Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14578
- Subject:
- XM_017020317.2
- Aligned Length:
- 1416
- Identities:
- 832
- Gaps:
- 490
Alignment
Query 1 ATGGACTATGACTTTAAAGTGAAGCTGAGCAGCGAGCGGGAGCGGGTCGAGGACCTGTTTGAATACGAGGGCTG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CAAAGTTGGCCGAGGCACTTATGGTCACGTCTACAAAGCCAAGAGGAAAGATGGGAAGGATGATAAAGACTATG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTTTAAAACAAATAGAAGGAACTGGGATCTCTATGTCGGCATGTAGAGAAATAGCATTACTTCGAGAGCTTAAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CATCCAAACGTCATTTCTCTTCAAAAGGTGTTTCTGTCTCATGCTGATAGGAAGGTGTGGCTTCTGTTTGACTA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGCTGAACATGACCTCTGGCATATAATCAAGTTTCACAGAGCTTCTAAAGCAAACAAGAAGCCAGTTCAGTTAC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTCGGGGAATGGTGAAGTCACTATTATATCAGATCCTAGATGGTATTCACTACCTGCATGCTAACTGGGTGTTG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 --------ATGGTGAAGTCACTATTATATCAGATCCTAGATGGTATTCACTACCTGCATGCTAACTGGGTGTTG 66
Query 445 CACAGAGATTTGAAACCTGCTAATATTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAAATTGCTGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67 CACAGAGATTTGAAACCTGCTAATATTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAAATTGCTGA 140
Query 519 CATGGGCTTTGCCCGATTATTTAATTCACCTTTGAAGCCTTTAGCAGATTTGGATCCAGTGGTTGTTACATTCT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 141 CATGGGCTTTGCCCGATTATTTAATTCACCTTTGAAGCCTTTAGCAGATTTGGATCCAGTGGTTGTTACATTCT 214
Query 593 GGTACCGAGCCCCTGAACTACTTCTTGGAGCAAGGCATTATACCAAAGCTATTGATATTTGGGCTCTCGACAGC 666
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|...|.
Sbjct 215 GGTACCGAGCCCCTGAACTACTTCTTGGAGCAAGGCATTATACCAAAGCTATTGATATTTGGGCTATAGGGTGT 288
Query 667 ATA----CAGCATGAA-TGCTAACGCTAATGGAC-------TCAC-GTCGACATGCCGTCGCAAGG-CATC--A 724
||| || ||| |.||||||..| |.|| |||| |||||||.| ||| |||| |
Sbjct 289 ATATTTGCA----GAACTACTAACGTCA--GAACCAATATTTCACTGTCGACAAG--------AGGACATCAAA 348
Query 725 ACTAGT-ATCTATA----CATGA-CAGCT-GAC-GAA---TCAGTAT----GGATT--CTGCAGTAGATGTAGA 781
|||||| |||..|| ||||| ||||| ||| ||| |||.|.| ||||| |||| ||||..|||
Sbjct 349 ACTAGTAATCCTTATCACCATGACCAGCTGGACAGAATATTCAATGTAATGGGATTTCCTGC---AGATAAAGA 419
Query 782 TT------------AAAAGATGCCTG-ACAT--CACAT--ATGAGA---TTCAGA--GAATACGTATACCAACT 833
|| |||||||||||| |||| .|||| ||||.| |||||| .||||||||||||||||
Sbjct 420 TTGGGAAGATATAAAAAAGATGCCTGAACATTCAACATTAATGAAAGATTTCAGAAGAAATACGTATACCAACT 493
Query 834 GCAGCC-TATCAAGTATATG--AAAACATAAAGTT-AACCAGATAGTAAAGCATT-CACTTGC-TCAGAAGCTG 901
|||||| ||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||
Sbjct 494 GCAGCCTTATCAAGTATATGGAAAAACATAAAGTTAAACCAGATAGTAAAGCATTCCACTTGCTTCAGAAGCTG 567
Query 902 CTTACCAT-GACCCAATAAAGCGAA-TACCTCAG-ACA-GCTATGCAGGACCCCTATTTC-TAG-AGAC---CA 966
|||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||| |||| |.
Sbjct 568 CTTACCATGGACCCAATAAAGCGAATTACCTCAGAACAGGCTATGCAGGACCCCTATTTCTTAGAAGACCCACT 641
Query 967 TTCTACATCAGACGTTTTTGCCGG-TGTCAAATCC--TTCCCAAAACGGGAATTTT--ACCGAAG-AGGACCTG 1034
|.|||||||||||||||||||||| |||||||||| |.|||||||||.||||||| ||.|||| ||.|||||
Sbjct 642 TCCTACATCAGACGTTTTTGCCGGTTGTCAAATCCCTTACCCAAAACGAGAATTTTTAACGGAAGAAGAACCTG 715
Query 1035 ATGGCAAAGG-GACCAAAA----CAGGCGCCACAGGAAGGCCATTACCAACA-TAAAGGAACTGGCCCCCCCGG 1102
|||.|||||| |||.|||| |||..||..|||.|.|||.||.||| ||| |||.||||||||||.|||.||
Sbjct 716 ATGACAAAGGAGACAAAAAGAACCAGCAGCAGCAGCAGGGCAATAACC-ACACTAATGGAACTGGCCACCCAGG 788
Query 1103 GAATCCAGGCCGCCGTTCCCCCCCGGGGCCCCCGGTGAAGGAAATGAGAAGTGTTCCTCCTTCCCATACCTTCG 1176
|||||.||.|.||.||..|.|.|.|||.||||||.|||||.||.|||||..||||||||||.||..|||| ||.
Sbjct 789 GAATCAAGACAGCAGTCACACACAGGGACCCCCGTTGAAGAAAGTGAGAGTTGTTCCTCCTACCACTACC-TCA 861
Query 1177 GGGGGAC-TATCCAGGCCTTCGGCCATTAGGGGTTCCATTCC-CCTGCCGCCTATTCCCACCCCGGGCCCAGCC 1248
||.|||| ||||..|.|||..|.|.||.| |.||||||.||| |.|||.||||| |||||.|||.||.|||..|
Sbjct 862 GGTGGACTTATCATGACCTCAGACTATCA-GCGTTCCAATCCACATGCTGCCTA-TCCCAACCCTGGACCAAGC 933
Query 1249 CCTTCCCA-CCGCAGAGCCGCCAGGGATAATTCAG-TACCTTCCCA-CCGCCTTCCCCAG-ACTCCCCTTCGGC 1318
.|.||.|| |||||||||.||..||||| |.|||| |||| ||||| |.||| |||.||| ||||.|.|..|.|
Sbjct 934 ACATCACAGCCGCAGAGCAGCATGGGAT-ACTCAGCTACC-TCCCAGCAGCC-TCCACAGTACTCACATCAGAC 1004
Query 1319 CCATTGGGAA 1328
.|||.||.|.
Sbjct 1005 ACATCGGTAC 1014
