Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14601
• Subject: NM_139062.4
• Aligned Length: 1267
• Identities: 988
• Gaps: 59

Alignment

Query    1  ATGGAGCTACGTGTGGGGAACAAGTACCGCCTGGGACGGAAGATCGGGAGCGGGTCCTTCGGAGATATCTACCT  74
            ||||||||..|.||.|||||||.||||||.|||||.|||||||||||.|||||.|||||||||||.|||||.||
Sbjct    1  ATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGCGGCTCCTTCGGAGACATCTATCT  74

Query   75  GGGTGCCAACATCGCCTCTGGTGAGGAAGTCGCCATCAAGCTGGAGTGTGTGAAGACAAAGCACCCCCAGCTGC  148
            .|||.|..||||.||..|.||.||.||.||.|||||||||||.||.|||||.||.||.||.|||||.|||||.|
Sbjct   75  CGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGTCAAAACCAAACACCCTCAGCTCC  148

Query  149  ACATCGAGAGCAAGTTCTACAAGATGATGCAGGGTGGCGTGGGGATCCCGTCCATCAAGTGGTGCGGAGCTGAG  222
            ||||.||||||||..|||||||||||||||||||.||.|||||.|||||..||||||..||||||||.||.|||
Sbjct  149  ACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCACCATCAGATGGTGCGGGGCAGAG  222

Query  223  GGCGACTACAACGTGATGGTCATGGAGCTGCTGGGGCCTAGCCTCGAGGACCTGTTCAACTTCTGTTCCCGCAA  296
            ||.|||||||||||.|||||.|||||||||||||||||.|||||.||||||||.|||||||||||.|||.|.||
Sbjct  223  GGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGACCTCTTCAACTTCTGCTCCAGGAA  296

Query  297  ATTCAGCCTCAAGACGGTGCTGCT-CTTGGCCGACCAGATGATCAGCCGCATCGAGTATATCCACTCCAAGAAC  369
            ||||||||||||.||.||.||||| ||| ||.|||||.||||||||.||||||||.||.||.||.||.||||||
Sbjct  297  ATTCAGCCTCAAAACCGTCCTGCTGCTT-GCTGACCAAATGATCAGTCGCATCGAATACATTCATTCAAAGAAC  369

Query  370  TTCATCCACCGGGACGTCAAGCCCGACAACTTCCTCATGGGGCTGGGGAAGAAGGGCAACCTGGTCTACATCAT  443
            ||||||||||||||.||.|||||.|||||||||||||||||.|||||||||||||||||||||||.||||||||
Sbjct  370  TTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGAAGGGCAACCTGGTGTACATCAT  443

Query  444  CGACTTCGGCCTGGCCAAGAAGTACCGGGACGCCCGCACCCACCAGCACATTCCCTACCGGGAAAACAAGAACC  517
            |||||||||.||||||||||||||||||||.||.|||||||||||||||||.|||||.||.||.||||||||||
Sbjct  444  CGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATCCCCTATCGTGAGAACAAGAACC  517

Query  518  TGACCGGCACGGCCCGCTACGCTTCCATCAACACGCACCTGGGCATTGAGCAAAGCCGTCGAGATGACCTGGAG  591
            |.||.||.|||||.||.|||||.|||||||||||||||||.||.|||||.|||..|||..||||||||.|||||
Sbjct  518  TCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACAATCCCGAAGAGATGACTTGGAG  591

Query  592  AGCCTGGGCTACGTGCTCATGTACTTCAACCTGGGCTCCCTGCCCTGGCAGGGGCTCAAAGCAGCCACCAAGCG  665
            ...||||||||||||||.||||||||||||||||||||.||.||||||||||||||.||.||.|||||||||.|
Sbjct  592  TCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGGGGCTGAAGGCTGCCACCAAGAG  665

Query  666  CCAGAAGTATGAACGGATCAGCGAGAAGAAGATGTCAACGCCCATCGAGGTCCTCTGCAAAGGCTATCCCTCCG  739
            .|||||.||.|||.||||.|||||||||||.|||||.||.||||||||.||..|.||.||||||||.||.||||
Sbjct  666  ACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTGTTGTGTAAAGGCTACCCTTCCG  739

Query  740  AATTCTCAACATACCTCAACTTCTGCCGCTCCCTGCGGTTTGACGACAAGCCCGACTACTCTTACCTACGTCAG  813
            ||||..|.||||||||.||.||||||||.|||.||||.||||||||||||||.||||||||.|||||.||.|||
Sbjct  740  AATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCCTGACTACTCGTACCTGCGGCAG  813

Query  814  CTCTTCCGCAACCTCTTCCACCGGCAGGGCTTCTCCTATGACTACGTCTTTGACTGGAACATGCTGAAATTCGG  887
            ||.|||||.||.||.|||||.||.|||||||||||||||||||||||.||.||||||||||||||.|||||.||
Sbjct  814  CTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCGACTGGAACATGCTCAAATTTGG  887

Query  888  TG-CAGCCCGGAATC--CCGAGGATGTGGACCGGGAGCGGCGAGAACA-CGAACGCGAGGAGAGGATGGGGCAG  957
            || |||||.||   |  ||||.||.|..||.||||||||       || .||.||.||||||.||.||.|.|| 
Sbjct  888  TGCCAGCCGGG---CCGCCGATGACGCCGAGCGGGAGCG-------CAGGGACCGAGAGGAGCGGCTGAGACA-  950

Query  958  CTACGGGGGTCC--GCGACCCGAGCCCT----------GCCCCCTGGCCCACCCACGGGGGCCACTGCCAACCG  1019
            || ||.||..||  ||.|||||.|.|||          |||.||  |.||.||..||||||.|.|.| .||..|
Sbjct  951  CT-CGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCC--GGCCGCCTGCGGGGGACGCAG-GAAGTG  1020

Query 1020  GCTCCGCAGTGCCGCCGAGCCCGTGGCTTCCACGCCAGCCTCCCGCATCCAGCCGGCTGGCAATACTTCTCCCA  1093
            |||||      ||.|..|.|||       .|||.||..||||.|.||      |||||   ||.||.||.|||.
Sbjct 1021  GCTCC------CCCCACACCCC-------TCACCCCTACCTCACACA------CGGCT---AACACCTCCCCCC  1072

Query 1094  GAGCGATCTCGCGG-GTCGACCGGGAGAGGAAGGTGAGTATGAGGCTGCACAGGGGTGCGCCCGCCAACGTCTC  1166
            |..|..|||| ||| .|.||..|.|||.||||.|||||||||.||||||||.|.||.||.||||.||||.||||
Sbjct 1073  GGCCCGTCTC-CGGCATGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTC  1145

Query 1167  CTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGAT-CCCAGCCTCACAGACAAGTGTGCCATTTGACCAT  1239
            |||.||.||||||||.||.||.|||||...|||.||.|| .||| |||||||||..||..|.||.||.||.||.
Sbjct 1146  CTCGTCCGACCTCACAGGCCGACAAGATACCTCTCGCATGTCCA-CCTCACAGAATAGCATTCCTTTCGAACAC  1218

Query 1240  CTCGGGAAG  1248
            |.|||.|||
Sbjct 1219  CACGGCAAG  1227