Construct: ORF ccsbBroad304_14601

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013253.2_s304c1, BRDN0000459713
Derived from:
ccsbBroadEn_14601
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CSNK1E (1454)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14601
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 102800317 TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough NM_001289912.2 100% 100%
2 human 1454 CSNK1E casein kinase 1 epsilon NM_001894.4 100% 100%
3 human 1454 CSNK1E casein kinase 1 epsilon NM_152221.3 100% 100%
4 human 1453 CSNK1D casein kinase 1 delta NM_139062.4 77.9% 84.3% (many diffs)
5 human 1453 CSNK1D casein kinase 1 delta NM_001893.6 76.9% 81% (many diffs)
6 mouse 27373 Csnk1e casein kinase 1, epsilon NM_001289898.1 90.7% 98.7% (many diffs)
7 mouse 27373 Csnk1e casein kinase 1, epsilon NM_013767.6 90.7% 98.7% (many diffs)
8 mouse 27373 Csnk1e casein kinase 1, epsilon XM_017316657.1 90.7% 98.7% (many diffs)
9 mouse 27373 Csnk1e casein kinase 1, epsilon XM_017316658.1 90.7% 98.7% (many diffs)
10 mouse 27373 Csnk1e casein kinase 1, epsilon XM_017316659.1 90.7% 98.7% (many diffs)
11 mouse 27373 Csnk1e casein kinase 1, epsilon XM_006521043.3 85.4% 67.9% (many diffs)
12 mouse 27373 Csnk1e casein kinase 1, epsilon XM_011245649.1 85.4% 67.9% (many diffs)
13 mouse 27373 Csnk1e casein kinase 1, epsilon XM_011245650.2 85.4% 67.9% (many diffs)
14 mouse 27373 Csnk1e casein kinase 1, epsilon XM_011245651.1 85.4% 67.9% (many diffs)
15 mouse 27373 Csnk1e casein kinase 1, epsilon XM_011245652.2 85.4% 67.9% (many diffs)
16 mouse 27373 Csnk1e casein kinase 1, epsilon XM_011245653.2 85.4% 67.9% (many diffs)
17 mouse 27373 Csnk1e casein kinase 1, epsilon XM_011245654.2 85.4% 67.9% (many diffs)
18 mouse 27373 Csnk1e casein kinase 1, epsilon NM_001289899.1 75.4% 73.3% (many diffs)
19 mouse 27373 Csnk1e casein kinase 1, epsilon XM_017316660.1 75.4% 73.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1314
ORF length:
1248
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga gctacgtgtg gggaacaagt accgcctggg acggaagatc gggagcgggt
121ccttcggaga tatctacctg ggtgccaaca tcgcctctgg tgaggaagtc gccatcaagc
181tggagtgtgt gaagacaaag cacccccagc tgcacatcga gagcaagttc tacaagatga
241tgcagggtgg cgtggggatc ccgtccatca agtggtgcgg agctgagggc gactacaacg
301tgatggtcat ggagctgctg gggcctagcc tcgaggacct gttcaacttc tgttcccgca
361aattcagcct caagacggtg ctgctcttgg ccgaccagat gatcagccgc atcgagtata
421tccactccaa gaacttcatc caccgggacg tcaagcccga caacttcctc atggggctgg
481ggaagaaggg caacctggtc tacatcatcg acttcggcct ggccaagaag taccgggacg
541cccgcaccca ccagcacatt ccctaccggg aaaacaagaa cctgaccggc acggcccgct
601acgcttccat caacacgcac ctgggcattg agcaaagccg tcgagatgac ctggagagcc
661tgggctacgt gctcatgtac ttcaacctgg gctCCCTGCC CTGGCAGGGG CTCAAAGCAG
721CCACCAAGCG CCAGAAGTAT GAACGGATCA GCGAGAAGAA GATGTCAACG CCCATCGAGG
781TCCTCTGCAA AGGCTATCCC TCCGAATTCT CAACATACCT CAACTTCTGC CGCTCCCTGC
841GGTTTGACGA CAAGCCCGAC TACTCTTACC TACGTCAGCT CTTCCGCAAC CTCTTCCACC
901GGCAGGGCTT CTCCTATGAC TACGTCTTTG ACTGGAACAT GCTGAAATTC GGTGCAGCCC
961GGAATCCCGA GGATGTGGAC CGGGAGCGGC GAGAACACGA ACGCGAGGAG AGGATGGGGC
1021AGCTACGGGG GTCCGCGACC CGAGCCCTGC CCCCTGGCCC ACCCACGGGG GCCACTGCCA
1081ACCGGCTCCG CAGTGCCGCC GAGCCCGTGG CTTCCACGCC AGCCTCCCGC ATCCAGCCGG
1141CTGGCAATAC TTCTCCCAGA GCGATCTCGC GGGTCGACCG GGAGAGGAAG GTGAGTATGA
1201GGCTGCACAG GGGTGCGCCC GCCAACGTCT CCTCCTCAGA CCTCACTGGG CGGCAAGAGG
1261TCTCCCGGAT CCCAGCCTCA CAGACAAGTG TGCCATTTGA CCATCTCGGG AAGTGCCCAA
1321CTTTCTTGTA Caaagtggtt ggtaagccta tccctaaccc tctcctcggt ctcgattcta
1381cgtagtaatg agctagcgct aaccggtggc gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.