Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14721
- Subject:
- XM_006517151.3
- Aligned Length:
- 2480
- Identities:
- 1274
- Gaps:
- 1018
Alignment
Query 1 ATGTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGGGCTTCTGCTGGCTGGTTGTGGGCTT 74
||||||.|||||.|.|.||||||||||||||||||||||||||||||||||||.|||..||||||..|||||||
Sbjct 1 ATGTCGCCCTGGCTGAAGTGGCATGGACCCGCCATGGCGCGGCTCTGGGGCTTATGCCTGCTGGTCTTGGGCTT 74
Query 75 CTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTTCTC 148
||||||||||.||.|||||||.||.||||||||||||||||||.||.||.||||.|||||.|..||.|||||||
Sbjct 75 CTGGAGGGCCTCTCTCGCCTGCCCGACGTCCTGCAAATGCAGTTCCGCTAGGATTTGGTGTACTGAGCCTTCTC 148
Query 149 CTGGCATCGTGGCATTTCCGAGATTGGAGCCTAACAGTGTAGATCCTGAGAACATCACCGAAATTTTCATCGCA 222
|.||||||||||||||.|||||.|||||.||||||||.||.||.||.|||||||||||.||||||.||||.|||
Sbjct 149 CAGGCATCGTGGCATTCCCGAGGTTGGAACCTAACAGCGTTGACCCGGAGAACATCACGGAAATTCTCATTGCA 222
Query 223 AACCAGAAAAGGTTAGAAATCATCAACGAAGATGATGTTGAAGCTTATGTGGGACTGAGAAATCTGACAATTGT 296
||||||||||||.|||||||||||||.||||||||.|||||||||||.|||||.||||||||.||.||||||||
Sbjct 223 AACCAGAAAAGGCTAGAAATCATCAATGAAGATGACGTTGAAGCTTACGTGGGGCTGAGAAACCTTACAATTGT 296
Query 297 GGATTCTGGATTAAAATTTGTGGCTCATAAAGCATTTCTGAAAAACAGCAACCTGCAGCACATCAATTTTACCC 370
||||||.||.|||||.|||||||||.|.|||||.||||||||||||||||||||||.||||||.|||||.||.|
Sbjct 297 GGATTCCGGCTTAAAGTTTGTGGCTTACAAAGCGTTTCTGAAAAACAGCAACCTGCGGCACATAAATTTCACAC 370
Query 371 GAAACAAACTGACGAGTTTGTCTAGGAAACATTTCCGTCACCTTGACTTGTCTGAACTGATCCTGGTGGGCAAT 444
|||||||.||||||||||||||.||||.|||||||||.|||||||||||||||||.|||||||||..|||.|||
Sbjct 371 GAAACAAGCTGACGAGTTTGTCCAGGAGACATTTCCGCCACCTTGACTTGTCTGACCTGATCCTGACGGGTAAT 444
Query 445 CCATTTACATGCTCCTGTGACATTATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGTCCAGACACTCAGGA 518
||.||.||.||||||||.|||||.||||||.|||||||||||||.|||.||||||||||.||.|||||||||||
Sbjct 445 CCGTTCACGTGCTCCTGCGACATCATGTGGCTCAAGACTCTCCAGGAGACTAAATCCAGCCCCGACACTCAGGA 518
Query 519 TTTGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCAATTGTGGTTTGCCAT 592
||||||||||||.|||||.|||||||||||.||.||||||||.||||||||||||||||||||||||.||||||
Sbjct 519 TTTGTACTGCCTCAATGAGAGCAGCAAGAACATGCCCCTGGCGAACCTGCAGATACCCAATTGTGGTCTGCCAT 592
Query 593 CTGCAAATCTGGCCGCACCTAACCTCACTGTGGAGGAAGGAAAGTCTATCACATTATCCTGTAGTGTGGCAGGT 666
|||||..||||||.||.|||||||||||.||||||||||||||||||.|.||..|.|||||.|||||||..|||
Sbjct 593 CTGCACGTCTGGCTGCTCCTAACCTCACCGTGGAGGAAGGAAAGTCTGTGACCCTTTCCTGCAGTGTGGGGGGT 666
Query 667 GATCCGGTTCCTAATATGTATTGGGATGTTGGTAACCTGGTTTCCAAACATATGAATGAAACAAGCCACACACA 740
||.||..|.||.|...||||.|||||.|||||.||..||||||||||.||.|||||||||||||||||||||||
Sbjct 667 GACCCACTCCCCACCTTGTACTGGGACGTTGGGAATTTGGTTTCCAAGCACATGAATGAAACAAGCCACACACA 740
Query 741 GGGCTCCTTAAGGATAACTAACATTTCATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGCGGAAAATCTTG 814
||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||||||||||.|||||.||||
Sbjct 741 GGGCTCCTTAAGGATAACGAACATTTCATCTGATGACAGTGGAAAGCAAATCTCTTGTGTGGCAGAAAACCTTG 814
Query 815 TAGGAGAAGATCAAGATTCTGTCAACCTCACTGTGCATTTTGCACCAACTATCACATTTCTCGAATCTCCAACC 888
||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||.|||||||||
Sbjct 815 TAGGAGAAGATCAAGATTCTGTGAACCTCACTGTGCATTTTGCGCCAACTATCACGTTTCTCGAGTCTCCAACC 888
Query 889 TCAGACCACCACTGGTGCATTCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTCTATAACGG 962
|||||.||||||||||||||||||||||||||||.||||||||||||.||.|||||||||||||||||.||.||
Sbjct 889 TCAGATCACCACTGGTGCATTCCATTCACTGTGAGAGGCAACCCCAAGCCTGCGCTTCAGTGGTTCTACAATGG 962
Query 963 GGCAATATTGAATGAGTCCAAATACATCTGTACTAAAATACATGTTACCAATCACACGGAGTACCACGGCTGCC 1036
|||.|||.|||||||||||||.||||||||||||||.||.||.||.||||||||||||||||||||.|||||||
Sbjct 963 GGCCATACTGAATGAGTCCAAGTACATCTGTACTAAGATCCACGTCACCAATCACACGGAGTACCATGGCTGCC 1036
Query 1037 TCCAGCTGGATAATCCCACTCACATGAACAATGGGGACTACACTCTAATAGCCAAGAATGAGTATGGGAAGGAT 1110
|||||||||||||.||||||||.|||||.||.||.||||||||.||.||.||||||||.|||||||||||||||
Sbjct 1037 TCCAGCTGGATAACCCCACTCATATGAATAACGGAGACTACACCCTGATGGCCAAGAACGAGTATGGGAAGGAT 1110
Query 1111 GAGAAACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAATTGACGATGGTGCAAACCCAAATTATCCTGATGT 1184
||||.||||||.||.|||||||||||||||.||||||||.|.|||.|.|...|||||||||||||.|||||.||
Sbjct 1111 GAGAGACAGATCTCCGCTCACTTCATGGGCCGGCCTGGAGTCGACTACGAGACAAACCCAAATTACCCTGAAGT 1184
Query 1185 AATTTATGAAGATTATGGA--ACTGCAGCGAA-TGACATCGGGGACACCACGAACAGAAGTAATGAAATCCCTT 1255
..|.|||||||| .|||| || ||.|| ||||||.|||||.||.|||||||.|||||||||||||||.|
Sbjct 1185 CCTCTATGAAGA--CTGGACCAC----GCCAACTGACATTGGGGATACTACGAACAAAAGTAATGAAATCCCCT 1252
Query 1256 CCACAGACGTCACTGATAAAACCGGTCGGGAACATCTCTCGGTCTATGCTGTGGTGGTGATTGCGTCTGTGGTG 1329
||||.||.||..||||..|||.|..||||||.|||||||||||||||||.||||||||||||||.|||||||||
Sbjct 1253 CCACGGATGTTGCTGACCAAAGCAATCGGGAGCATCTCTCGGTCTATGCCGTGGTGGTGATTGCATCTGTGGTG 1326
Query 1330 GGATTTTGCCTTTTGGTAATGCTGTTTCTGCTTAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGGCCCAGC 1403
|||||.|||||..||||.|||.||.|.|||||.||||||||.|||||.||||||||||||||||||||
Sbjct 1327 GGATTCTGCCTGCTGGTGATGTTGCTCCTGCTCAAGTTGGCGAGACATTCCAAGTTTGGCATGAAAGG------ 1394
Query 1404 CTCCGTTATCAGCAA----------TGATGATGACTCTGCCAGCCCACTCCATCACATCTCCAATGGGAGTAAC 1467
||.|| |.|||||||| |||
Sbjct 1395 ----------AGGAAGCGGCTGGATTTATGATGAC-----------------------------TGG------- 1422
Query 1468 ACTCCATCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATTGGAATGACCAAGATCCCTGTCATTGAAAATCC 1541
||||| ||| |||| || ||||
Sbjct 1423 --------TTCTT---AAG-----------GCTG------------------AG--------------AAAT-- 1440
Query 1542 CCAGTACTTTGGCATCACCAACAGTCAGCTCAAGCCAGACACATTTG-TTCAGCACATCAAGCGACATAACATT 1614
|.||| |||| .||.|| |.|..|||||||| ||||.||
Sbjct 1441 -------------------AGCAG------CAAG-------GATATGATACTACACATCAA--GACAGAA---- 1476
Query 1615 GTTCTGAAAAGGGAGCTAGGCGAAGGAGCCTTTGGAAAAGTGTTCCTAGCTGAATGCTATAACCTCTGTCCTGA 1688
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 1689 GCAGGACAAGATCTTGGTGGCAGTGAAGACCCTGAAGGATGCCAGTGACAATGCACGCAAGGACTTCCACCGTG 1762
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 1763 AGGCCGAGCTCCTGACCAACCTCCAGCATGAGCACATCGTCAAGTTCTATGGCGTCTGCGTGGAGGGCGACCCC 1836
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 1837 CTCATCATGGTCTTTGAGTACATGAAGCATGGGGACCTCAACAAGTTCCTCAGGGCACACGGCCCTGATGCCGT 1910
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 1911 GCTGATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCCAGCAGATCGCCG 1984
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 1985 CGGGCATGGTCTACCTGGCGTCCCAGCACTTCGTGCACCGCGATTTGGCCACCAGGAACTGCCTGGTCGGGGAG 2058
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 2059 AACTTGCTGGTGAAAATCGGGGACTTTGGGATGTCCCGGGACGTGTACAGCACTGACTACTACAGGGTCGGTGG 2132
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 2133 CCACACAATGCTGCCCATTCGCTGGATGCCTCCAGAGAGCATCATGTACAGGAAATTCACGACGGAAAGCGACG 2206
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 2207 TCTGGAGCCTGGGGGTCGTGTTGTGGGAGATTTTCACCTATGGCAAACAGCCCTGGTACCAGCTGTCAAACAAT 2280
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 2281 GAGGTGATAGAGTGTATCACTCAGGGCCGAGTCCTGCAGCGACCCCGCACGTGCCCCCAGGAGGTGTATGAGCT 2354
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 2355 GATGCTGGGGTGCTGGCAGCGAGAGCCCCACATGAGGAAGAACATCAAGGGCATCCATACCCTCCTTCAGAACT 2428
Sbjct 1477 -------------------------------------------------------------------------- 1476
Query 2429 TGGCCAAGGCATCTCCGGTCTACCTGGACATTCTAGGC 2466
Sbjct 1477 -------------------------------------- 1476
