Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14755
Subject:
NR_047689.1
Aligned Length:
2132
Identities:
1104
Gaps:
1026

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACGTTAGCCTCCGGTCATCAAATAGCAAAACCCAAAACAACAGCAGATGATATCTTCCAAGTGTCTGCTCGGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CACGGCTTCAGCCCTCTGTGGTCCCCTCTCCCCGGGGGGCTTTGGGATTCTTGTCAAGCTCCTTCAAGAGCCTG  148

Query    1  -----------------------------------------------ATGACCCGGGACGAGGCACTGCCGGAC  27
                                                           |||||||||||||||||||||||||||
Sbjct  149  CAAGCACTTAACCAGCCACCCAGAGTTCCCTCACTGAAGATCTGAGCATGACCCGGGACGAGGCACTGCCGGAC  222

Query   28  TCTCATTCTGCACAGGACTTCTATGAGAATTATGAGCCCAAAGAGATCCTGGGCAGGGGCGTTAGCAGTGTGGT  101
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCTCATTCTGCACAGGACTTCTATGAGAATTATGAGCCCAAAGAGATCCTGGGCAGGGGCGTTAGCAGTGTGGT  296

Query  102  CAGGCGATGCATCCACAAGCCCACGAGCCAGGAGTACGCCGTGAAGGTCATCGACGTCACCGGTGGAGGCAGCT  175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGGCGATGCATCCACAAGCCCACGAGCCAGGAGTACGCCGTGAAGGTCATCGACGTCACCGGTGGAGGCAGCT  370

Query  176  TCAGCCCGGAGGAGGTGCGGGAGCTGCGAGAAGCCACGCTGAAGGAGGTGGACATCCTGCGCAAGGTCTCAGGG  249
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCAGCCCGGAGGAGGTGCGGGAGCTGCGAGAAGCCACGCTGAAGGAGGTGGACATCCTGCGCAAGGTCTCAGGG  444

Query  250  CACCCCAACATCATACAGCTGAAGGACACTTATGAGACCAACACTTTCTTCTTCTTGGTGTTTGACCTGATGAA  323
            |||||||||||||                                                       ||||||
Sbjct  445  CACCCCAACATCA-------------------------------------------------------GATGAA  463

Query  324  GAGAGGGGAGCTCTTTGACTACCTCACTGAGAAGGTCACCTTGAGTGAGAAGGAAACCAGAAAANATCATGCGA  397
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||.|||||||||
Sbjct  464  GAGAGGGGAGCTCTTTGACTACCTCACTGAGAAGGTCACCTTGAGTGAGAAGGAAACCAG-AAAGATCATGCGA  536

Query  398  GCTCTGCTGGAGGTGATCTGCACCTTGCACAAACTCAACATCGTGCACCGGGACCTGAAGCCCGAGAACATTCT  471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  537  GCTCTGCTGGAGGTGATCTGCACCTTGCACAAACTCAACATCGTGCACCGGGACCTGAAGCCCGAGAACATTCT  610

Query  472  CTTGGATGACAACATGAACATCAAGCTCACAGACTTTGGCTTTTCCTGCCAGCTGGAGCCGGGAGAGAGGCTGC  545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  611  CTTGGATGACAACATGAACATCAAGCTCACAGACTTTGGCTTTTCCTGCCAGCTGGAGCCGGGAGAGAGGCTGC  684

Query  546  GAGAGGTCTGTGGGACCCCCAGTTACCTGGCCCCTGAGATTATCGAGTGCTCCATGAATGAGGACCACCCGGGC  619
            ||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  685  GAGAGGTCTGCGGGACCCCCAGTTACCTGGCCCCTGAGATTATCGAGTGCTCCATGAATGAGGACCACCCGGGC  758

Query  620  TACGGGAAAGAGGTGGACATGTGGAGCACTGGCGTCATCATGTACACGCTGCTGGCCGGCTCCCCGCCCTTCTG  693
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  759  TACGGGAAAGAGGTGGACATGTGGAGCACTGGCGTCATCATGTACACGCTGCTGGCCGGCTCCCCGCCCTTCTG  832

Query  694  GCACCGGAAGCAGATGCTGATGCTGAGGATGATCATGAGCGGCAACTACCAGTTTGGCTCGCCCGAGTGGGATG  767
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  833  GCACCGGAAGCAGATGCTGATGCTGAGGATGATCATGAGCGGCAACTACCAGTTTGGCTCGCCCGAGTGGGATG  906

Query  768  ATTACTCGGACACCGTGAAGGACCTGGTTCTCCCGATTCCTGGTGGTGCAACCCCAGAACCGCTACACAGCGGA  841
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  907  ATTACTCGGACACCGTGAAGGACCTGG-TCTCCCGATTCCTGGTGGTGCAACCCCAGAACCGCTACACAGCGGA  979

Query  842  AGAGGCCTTGGCACACCCCTTCTTCCAGCAGTACTTGGTGGAGGAAGTGCGGCACTTCAGCCCCCGGGGGAAGT  915
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  980  AGAGGCCTTGGCACACCCCTTCTTCCAGCAGTACTTGGTGGAGGAAGTGCGGCACTTCAGCCCCCGGGGGAAGT  1053

Query  916  TCAAGGTGATCGCTCTGACCGTGCTGGCTTCAGTGCGGATCTACTACCAGTACCGCCGGGTGAAGCCTGTGACC  989
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1054  TCAAGGTGATCGCTCTGACCGTGCTGGCTTCAGTGCGGATCTACTACCAGTACCGCCGGGTGAAGCCTGTGACC  1127

Query  990  CGGGAGATCGTCATCCGAGACCCCTATGCCCTCCGGCCTCTGCGCCGGCTCATCGACGCCTACGCTTTCCGAAT  1063
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1128  CGGGAGATCGTCATCCGAGACCCCTATGCCCTCCGGCCTCTGCGCCGGCTCATCGACGCCTACGCTTTCCGAAT  1201

Query 1064  CTATGGCCACTGGGTGAAGAAGGGGCAGCAGCAGAACCGGGCAGCCCTTTTCGAGAACACACCCAAGGCCGTGC  1137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202  CTATGGCCACTGGGTGAAGAAGGGGCAGCAGCAGAACCGGGCAGCCCTTTTCGAGAACACACCCAAGGCCGTGC  1275

Query 1138  TCCTCTCCCTGGCCGAGGAGGACTAC------------------------------------------------  1163
            ||||||||||||||||||||||||||                                                
Sbjct 1276  TCCTCTCCCTGGCCGAGGAGGACTACTGAGGGGCTGGCCAGTCAGGGAGGGCTAGGGGGCAGGTGGGGAGGGGA  1349

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1350  AGCCATGGAAATACAAGTCAAAGGGGTGAGATGCGTGCAGGCCTCTGCAGAAGGAGCACTTGGCCCTGGCCAGG  1423

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1424  AACCCCTGGAACTGAGGCCACGATCCCCTCTCAAAGGCTGTGCACAAGGGAAGTGGGTGTTCCCACCACACAGC  1497

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1498  AATACCTGCAGGCTGGGGCAGGCCCTGGGTGGGCAGAGATCACACGTGGCCTGAGAACCAGGAACCCCCTGCTC  1571

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1572  CTCTACTTCCTAGATGAGCCACCATCTCCATTTCTCTTTAGGGGAGGCCCAGAGTTACTGACACTCAGGCTTTC  1645

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1646  TTCCCTTAGGGTCACAGGGTGAGGATCAAAGACACAAATGTCTGAGATACACAATTGCAGGAGATTTTATTGGC  1719

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1720  CCCATGACATCCAGTGACAGTGTGGGAGCAGGCTACTCTCCAGGGACATGTTTTTGGAGGCATATGGAGAAGGG  1793

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1794  GGCCCAGGCGAGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTCGAGGTGGGAGGATCGCTTGAGGCCA  1867

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1868  GGAGTTCGAGACCACCCTGGGCAACAGAGCGAGATCCCATCACTACAAAAATTCAAAAAATTAGCCAGGCATGG  1941

Query 1164  --------------------------------------------------------------------------  1163
                                                                                      
Sbjct 1942  TGGTGCACACTTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGAATTGCTTGGGCCCAGGAATTCAAGGCT  2015

Query 1164  ------------------------------------------------------------  1163
                                                                        
Sbjct 2016  AGAGTGAGCCGTGATCACCAGTGCACTCTAGCCTGGGCAACAGAGAAAGACCCTGTCTCA  2075