Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14755
- Subject:
- NR_047689.1
- Aligned Length:
- 2132
- Identities:
- 1104
- Gaps:
- 1026
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGTTAGCCTCCGGTCATCAAATAGCAAAACCCAAAACAACAGCAGATGATATCTTCCAAGTGTCTGCTCGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACGGCTTCAGCCCTCTGTGGTCCCCTCTCCCCGGGGGGCTTTGGGATTCTTGTCAAGCTCCTTCAAGAGCCTG 148
Query 1 -----------------------------------------------ATGACCCGGGACGAGGCACTGCCGGAC 27
|||||||||||||||||||||||||||
Sbjct 149 CAAGCACTTAACCAGCCACCCAGAGTTCCCTCACTGAAGATCTGAGCATGACCCGGGACGAGGCACTGCCGGAC 222
Query 28 TCTCATTCTGCACAGGACTTCTATGAGAATTATGAGCCCAAAGAGATCCTGGGCAGGGGCGTTAGCAGTGTGGT 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCTCATTCTGCACAGGACTTCTATGAGAATTATGAGCCCAAAGAGATCCTGGGCAGGGGCGTTAGCAGTGTGGT 296
Query 102 CAGGCGATGCATCCACAAGCCCACGAGCCAGGAGTACGCCGTGAAGGTCATCGACGTCACCGGTGGAGGCAGCT 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAGGCGATGCATCCACAAGCCCACGAGCCAGGAGTACGCCGTGAAGGTCATCGACGTCACCGGTGGAGGCAGCT 370
Query 176 TCAGCCCGGAGGAGGTGCGGGAGCTGCGAGAAGCCACGCTGAAGGAGGTGGACATCCTGCGCAAGGTCTCAGGG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCAGCCCGGAGGAGGTGCGGGAGCTGCGAGAAGCCACGCTGAAGGAGGTGGACATCCTGCGCAAGGTCTCAGGG 444
Query 250 CACCCCAACATCATACAGCTGAAGGACACTTATGAGACCAACACTTTCTTCTTCTTGGTGTTTGACCTGATGAA 323
||||||||||||| ||||||
Sbjct 445 CACCCCAACATCA-------------------------------------------------------GATGAA 463
Query 324 GAGAGGGGAGCTCTTTGACTACCTCACTGAGAAGGTCACCTTGAGTGAGAAGGAAACCAGAAAANATCATGCGA 397
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||.|||||||||
Sbjct 464 GAGAGGGGAGCTCTTTGACTACCTCACTGAGAAGGTCACCTTGAGTGAGAAGGAAACCAG-AAAGATCATGCGA 536
Query 398 GCTCTGCTGGAGGTGATCTGCACCTTGCACAAACTCAACATCGTGCACCGGGACCTGAAGCCCGAGAACATTCT 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 GCTCTGCTGGAGGTGATCTGCACCTTGCACAAACTCAACATCGTGCACCGGGACCTGAAGCCCGAGAACATTCT 610
Query 472 CTTGGATGACAACATGAACATCAAGCTCACAGACTTTGGCTTTTCCTGCCAGCTGGAGCCGGGAGAGAGGCTGC 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 CTTGGATGACAACATGAACATCAAGCTCACAGACTTTGGCTTTTCCTGCCAGCTGGAGCCGGGAGAGAGGCTGC 684
Query 546 GAGAGGTCTGTGGGACCCCCAGTTACCTGGCCCCTGAGATTATCGAGTGCTCCATGAATGAGGACCACCCGGGC 619
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 GAGAGGTCTGCGGGACCCCCAGTTACCTGGCCCCTGAGATTATCGAGTGCTCCATGAATGAGGACCACCCGGGC 758
Query 620 TACGGGAAAGAGGTGGACATGTGGAGCACTGGCGTCATCATGTACACGCTGCTGGCCGGCTCCCCGCCCTTCTG 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 759 TACGGGAAAGAGGTGGACATGTGGAGCACTGGCGTCATCATGTACACGCTGCTGGCCGGCTCCCCGCCCTTCTG 832
Query 694 GCACCGGAAGCAGATGCTGATGCTGAGGATGATCATGAGCGGCAACTACCAGTTTGGCTCGCCCGAGTGGGATG 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 833 GCACCGGAAGCAGATGCTGATGCTGAGGATGATCATGAGCGGCAACTACCAGTTTGGCTCGCCCGAGTGGGATG 906
Query 768 ATTACTCGGACACCGTGAAGGACCTGGTTCTCCCGATTCCTGGTGGTGCAACCCCAGAACCGCTACACAGCGGA 841
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 ATTACTCGGACACCGTGAAGGACCTGG-TCTCCCGATTCCTGGTGGTGCAACCCCAGAACCGCTACACAGCGGA 979
Query 842 AGAGGCCTTGGCACACCCCTTCTTCCAGCAGTACTTGGTGGAGGAAGTGCGGCACTTCAGCCCCCGGGGGAAGT 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 980 AGAGGCCTTGGCACACCCCTTCTTCCAGCAGTACTTGGTGGAGGAAGTGCGGCACTTCAGCCCCCGGGGGAAGT 1053
Query 916 TCAAGGTGATCGCTCTGACCGTGCTGGCTTCAGTGCGGATCTACTACCAGTACCGCCGGGTGAAGCCTGTGACC 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1054 TCAAGGTGATCGCTCTGACCGTGCTGGCTTCAGTGCGGATCTACTACCAGTACCGCCGGGTGAAGCCTGTGACC 1127
Query 990 CGGGAGATCGTCATCCGAGACCCCTATGCCCTCCGGCCTCTGCGCCGGCTCATCGACGCCTACGCTTTCCGAAT 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1128 CGGGAGATCGTCATCCGAGACCCCTATGCCCTCCGGCCTCTGCGCCGGCTCATCGACGCCTACGCTTTCCGAAT 1201
Query 1064 CTATGGCCACTGGGTGAAGAAGGGGCAGCAGCAGAACCGGGCAGCCCTTTTCGAGAACACACCCAAGGCCGTGC 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202 CTATGGCCACTGGGTGAAGAAGGGGCAGCAGCAGAACCGGGCAGCCCTTTTCGAGAACACACCCAAGGCCGTGC 1275
Query 1138 TCCTCTCCCTGGCCGAGGAGGACTAC------------------------------------------------ 1163
||||||||||||||||||||||||||
Sbjct 1276 TCCTCTCCCTGGCCGAGGAGGACTACTGAGGGGCTGGCCAGTCAGGGAGGGCTAGGGGGCAGGTGGGGAGGGGA 1349
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1350 AGCCATGGAAATACAAGTCAAAGGGGTGAGATGCGTGCAGGCCTCTGCAGAAGGAGCACTTGGCCCTGGCCAGG 1423
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1424 AACCCCTGGAACTGAGGCCACGATCCCCTCTCAAAGGCTGTGCACAAGGGAAGTGGGTGTTCCCACCACACAGC 1497
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1498 AATACCTGCAGGCTGGGGCAGGCCCTGGGTGGGCAGAGATCACACGTGGCCTGAGAACCAGGAACCCCCTGCTC 1571
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1572 CTCTACTTCCTAGATGAGCCACCATCTCCATTTCTCTTTAGGGGAGGCCCAGAGTTACTGACACTCAGGCTTTC 1645
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1646 TTCCCTTAGGGTCACAGGGTGAGGATCAAAGACACAAATGTCTGAGATACACAATTGCAGGAGATTTTATTGGC 1719
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1720 CCCATGACATCCAGTGACAGTGTGGGAGCAGGCTACTCTCCAGGGACATGTTTTTGGAGGCATATGGAGAAGGG 1793
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1794 GGCCCAGGCGAGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGTCGAGGTGGGAGGATCGCTTGAGGCCA 1867
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1868 GGAGTTCGAGACCACCCTGGGCAACAGAGCGAGATCCCATCACTACAAAAATTCAAAAAATTAGCCAGGCATGG 1941
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1942 TGGTGCACACTTGTAGTCCCAGCTACTCAGGAGGCTGAGGTGGGAGAATTGCTTGGGCCCAGGAATTCAAGGCT 2015
Query 1164 ------------------------------------------------------------ 1163
Sbjct 2016 AGAGTGAGCCGTGATCACCAGTGCACTCTAGCCTGGGCAACAGAGAAAGACCCTGTCTCA 2075