Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14755
- Subject:
- NR_145487.1
- Aligned Length:
- 2948
- Identities:
- 1011
- Gaps:
- 1794
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCAAGTACCAAAGTTCCGCAAGAGGAGCAAGACAGCAACTCCAATAAGTGTCTGCTCAGGACACAGCTTCAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTTTGTGGTCTGCTGTCTCCCAAGGGCTCCAGGACCTTTGGAATTCTTGTCACTTCCATTCAAGGGCCTACAA 148
Query 1 --------------------------------------------ATGACCCGGGACGAGGCACTGCCGGACTCT 30
|||||||||||.||.||.||.||.|||||.
Sbjct 149 GGACCTCACGAGGTGTTTGGGATCCCCCTGAGATCCACGTGACCATGACCCGGGATGACGCCCTCCCTGACTCG 222
Query 31 CATTCTGCACAGGAC-TTCTATGAGAATTATGAGCCCAAAGAGATCCTGGGCAGGGGCGTTAGCAGTGTGGTCA 103
||||||||||| ||| |||||.|||||.|||||||||||.|||||||||||||||||.||.|||||||||||||
Sbjct 223 CATTCTGCACA-GACTTTCTACGAGAACTATGAGCCCAAGGAGATCCTGGGCAGGGGAGTCAGCAGTGTGGTCA 295
Query 104 GGCGATGCATCCACAAGCCCACGAGCCAGGAGTACGCCGTGAAGGTCATCGACGTCACCGGTGGAGGCAGCTTC 177
||||.|||||||||||.|||||..|||||||.|||||.|||||..||||.|||.|||||||.|||||.|||||.
Sbjct 296 GGCGCTGCATCCACAAACCCACATGCCAGGAATACGCAGTGAAAATCATTGACATCACCGGAGGAGGAAGCTTT 369
Query 178 AGCCCGGAGGAGGTGCGGGAGCTGCGAGAAGCCACGCTGAAGGAGGTGGACATCCTGCGCAAGGTCTCAGGGCA 251
|||.|.||||||||.|.||||||.||.||||||||.||||||||||||||||||||||..||||||||.||.||
Sbjct 370 AGCTCTGAGGAGGTACAGGAGCTTCGGGAAGCCACCCTGAAGGAGGTGGACATCCTGCAGAAGGTCTCGGGACA 443
Query 252 CCCCAACATCATACAGCTGAAGGACACTTATGAGACCAACACTTTCTTCTTCTTGGTGTTTGACCTGATGAAGA 325
||||||||||| ||||||||||||||.||||||||||||||||||||||||||.|||||.||||||||||
Sbjct 444 CCCCAACATCA-----CTGAAGGACACTTACGAGACCAACACTTTCTTCTTCTTGGTATTTGATCTGATGAAGA 512
Query 326 GAGGGGAGCTCTTTGACTACCTCACTGAGAAGGTCACCTTGAGTGAGAAGGAAACCAGAAAANATCATGCGAGC 399
|||||||.|||||||||||.||||||||||||||||||||.|..|||||||||||||| |||.||||||||.||
Sbjct 513 GAGGGGAACTCTTTGACTATCTCACTGAGAAGGTCACCTTAACCGAGAAGGAAACCAG-AAAGATCATGCGGGC 585
Query 400 TCTGCTGGAGGTGATCTGCACCTTGCACAAACTCAACATCGTGCACCGGGACCTGAAGCCCGAGAACATTCTCT 473
.|||||||||||||||||.|||.||||||||||||||||.||.||.||||||||||||||.|||||.||.||.|
Sbjct 586 CCTGCTGGAGGTGATCTGTACCCTGCACAAACTCAACATTGTCCATCGGGACCTGAAGCCGGAGAATATCCTTT 659
Query 474 TGGATGACAACATGAACATCAAGCTCACAGACTTTGGCTTTTCCTGCCAGCTGGAGCCGGGAGAGAGGCTGCG- 546
||||||||||||||||.||.||||||||||||||.||.|||||||||||||||.||||.|||||||.|||.||
Sbjct 660 TGGATGACAACATGAATATAAAGCTCACAGACTTCGGGTTTTCCTGCCAGCTGCAGCCAGGAGAGAAGCTCCGA 733
Query 547 -------------------------------------------------------------------------- 546
Sbjct 734 GGTCTGGTACTATGTATGGCCTTGGCCCATAAAGAGGCCTCAAGGGTAGAGATTGCATGATTTTCTCCCCAGAA 807
Query 547 -------------------------------------------------------------------------- 546
Sbjct 808 TAAAAATTCTAGCATGTCAGTGGCTAATGAGATGGCTCAGTGGATCAAATGAGGACACAAGCATGAGGACCTGA 881
Query 547 -------------------------------------------------------------------------- 546
Sbjct 882 GTTCGAATCCCCAGAGCCCATGTAACTCCAGCAATAGGCTGGCAGCTAGGAGGATCTCTCGGGGTTGCTGGCTG 955
Query 547 -------------------------------------------------------------------------- 546
Sbjct 956 GTCTGCCTGAATCAGTCAGCTTCAGGCCAGTGAGAAATCCTGTCTCAAAAAGCAAGGTGAAAGCGGGGCGTGGT 1029
Query 547 -------------------------------------------------------------------------- 546
Sbjct 1030 GGCGCACGCCTTTAATCCCAAGCACTTGGGAGACAGAGGCAGGTGAATTTCTGAGTTCCAGAGTCAGGTTCCCA 1103
Query 547 -------------------------------------------------------------------------- 546
Sbjct 1104 CCACCTGAGCTCCACGCCCGGGTGCCTAAAAGGACCTAGGAATCCACAGGTGACCCTCCGAGCCTGTGTAGTCT 1177
Query 547 -------------------------------------------------------------------------- 546
Sbjct 1178 GCTGTTACTATTGAGTGTAAAATAGGAGAGCCCTCCCAAGCACTGTTTTTGTCCTGTCTCTTGGATCTCTTGGG 1251
Query 547 --------------------------------------------------------AGAGGTCTGTGGGACCCC 564
||||||.||||||||.||
Sbjct 1252 TAACTTCTTCCAAGGGAGGGCCCCTGGTGTCCTGTCCTGATAGCAGCCGTTCCCGCAGAGGTTTGTGGGACTCC 1325
Query 565 CAGTTACCTGGCCCCTGAGATTATCGAGTGCTCCATGAATGAGGACCACCCGGGCTACGGGAAAGAGGTGGACA 638
||||||.|||||||||||.||.||..|||||||||||.|.||.|.|||.||.|||||.|||||.||||||||||
Sbjct 1326 CAGTTATCTGGCCCCTGAAATCATACAGTGCTCCATGGACGACGGCCATCCTGGCTATGGGAAGGAGGTGGACA 1399
Query 639 TGTGGAGCACTGGCGTCATCATGTACACGCTGCTGGCCGGCTCCCCGCCCTTCTGGCACCGGAAGCAGATGCTG 712
||||||||||.|||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||.||||||
Sbjct 1400 TGTGGAGCACAGGCGTCATCATGTACACTCTGCTGGCTGGCTCCCCGCCTTTCTGGCACCGGAAGCAAATGCTG 1473
Query 713 ATGCTGAGGATGATCATGAGCGGCAACTACCAGTTTGGCTCGCCCGAGTGGGATGATTACTCGGACACCGTGAA 786
|||.||.|||||||||||..||||||.||||||||||||||.||.|||||||||||.|||||.|||||.|||||
Sbjct 1474 ATGTTGCGGATGATCATGGACGGCAAATACCAGTTTGGCTCACCAGAGTGGGATGACTACTCTGACACAGTGAA 1547
Query 787 GGACCTGGT-TCTCCCGATTCCTGGTGGTGCAACCCCAGAACCGCTACACAGCGGAAGAGGCCTTGGCACACCC 859
.|||.|||| ||| ||||||.|||||||||||||.|||.||||||.|.|.|||||||||||||||||||||||
Sbjct 1548 AGACTTGGTGTCT--CGATTCTTGGTGGTGCAACCTCAGGACCGCTGCTCGGCGGAAGAGGCCTTGGCACACCC 1619
Query 860 CTTCTTCCAGCAGTACTTGGTGGAGGAAGTGCGGCACTTCAGCCCCCGGGGGAAGTTCAAGGTGATCGCTCTGA 933
.|||||.|||.|||||.|.||.||.|||||.|||||||||||||||||.||||||||||||||||||..|||.|
Sbjct 1620 TTTCTTTCAGGAGTACGTAGTAGAAGAAGTACGGCACTTCAGCCCCCGAGGGAAGTTCAAGGTGATCTGTCTAA 1693
Query 934 CCGTGCTGGCTTCAGTGCGGATCTACTACCAGTACCGCCGGGTGAAGCCTGTGACCCGGGAGATCGTCATCCGA 1007
|.||||||||.|||||...||||||||||||||||||.|||||||||||.||.|||.|||||||||||||||||
Sbjct 1694 CTGTGCTGGCATCAGTAAAGATCTACTACCAGTACCGTCGGGTGAAGCCGGTAACCAGGGAGATCGTCATCCGA 1767
Query 1008 GACCCCTATGCCCTCCGGCCTCTGCGCCGGCTCATCGACGCCTACGCTTTCCGAATCTATGGCCACTGGGTGAA 1081
||||||||.|||||.|||||.|||||..|||||||.||||||||.||||||||.|||||.||||||||||||||
Sbjct 1768 GACCCCTACGCCCTTCGGCCGCTGCGGAGGCTCATTGACGCCTATGCTTTCCGTATCTACGGCCACTGGGTGAA 1841
Query 1082 GAAGGGGCAGCAGCAGAACCGGGCAGCCCTTTTCGAGAACACACCCAAGGCCGTGCTCCTCTCCCTGGCCGAGG 1155
|||.|||||.|||||||||.|.||.|||||.|||||||||||.||||||||.||||||||||||.||||.||||
Sbjct 1842 GAAAGGGCAACAGCAGAACAGAGCCGCCCTCTTCGAGAACACGCCCAAGGCTGTGCTCCTCTCCTTGGCTGAGG 1915
Query 1156 AGGACTAC------------------------------------------------------------------ 1163
||||..||
Sbjct 1916 AGGAGGACTTCTGAAGGGCAGCGGGGGCCCAGGGGAAAGCAGACAGAGGGACTTGTGAGAAGAGGATGCCCCAA 1989
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 1990 GTAGCCTTCTGCAAAGGAATAGGTGGCCCTACTCTGTGCTCTCAAAGGCTTGCCTCTAGAAGCACAGGGTGTTC 2063
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2064 CCAGTAAACAGCAGTAATTACAGCTGGAGCTGGATGTGCTGTGGCATGTGCCTGTTGCCCCGAGACAGTAGGAT 2137
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2138 CACGGGTTCTAGCCCAGCCCGGGAAGTCTAGTGATGCTTATTTCAAAATAAAAATGAGGCTGGGAATGTAACCC 2211
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2212 TGTGGTGAGTGTAAGGTCTCCAAATTCAACCTCTGGTACAGCTAAAATAGATAATAAATAAATAAATAATAAAT 2285
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2286 CCAACGCAGCTGAGACCGTGATAGGCAGAAATGGAAGGGCATAGAGCACATGTATTCTGGGAGCTATAAGCCTT 2359
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2360 CTGGCTTCTCTACTGTGCACCTTTGTTGATGTCTATAGTTTTCTTGTTTTTTTTTTTAAGATTTATGCATTTTA 2433
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2434 TGTATGTTTTAGCTGCATGCATTTTATGTAACCCACATGCATGCAGTACCTGTAGAGGTCACAAGAAGGCATCA 2507
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2508 GAAACCCTGAAACTGGAGTTGTATAGATAGCTGAGCCCACCTTGTGGGTGGTAGGAATTGAACCCCTCCTCAGC 2581
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2582 AAGAACAGGCGCTCATAACTGTCTAGCTAAAGTTATGGATATTTGAGGAAGTGAAAGCAGGAGTTCAAGGTCAT 2655
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2656 TTGTGGCTACACAAGGAGCTTGAGGCTAGCCTGGGCTACATGAAACCCTATCTCAAACAACAATTATATTGTGC 2729
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2730 TTCCTGATATACATAAGAATTTATTGACCTCGGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTGCTC 2803
Query 1164 -------------------------------------------------------------------------- 1163
Sbjct 2804 TTCCAAAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGATGCCC 2877
Query 1164 -------------------------------------------------------------- 1163
Sbjct 2878 TCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAAATAAATCTTAA 2939
