Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14790
- Subject:
- XM_011532983.2
- Aligned Length:
- 2220
- Identities:
- 1291
- Gaps:
- 920
Alignment
Query 1 ATGGTAGTGTTCAATGGCCTTCTTAAGATCAAAATCTGCGAGGCCGTGAGCTTGAAGCCCACAGCCTGGTCGCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCGCCATGCGGTGGGACCCCGGCCGCAGACTTTCCTTCTCGACCCCTACATTGCCCTCAATGTGGACGACTCGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GCATCGGCCAAACGGCCACCAAGCAGAAGACCAACAGCCCGGCCTGGCACGACGAGTTCGTCACCGATGTGTGC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AACGGACGCAAGATCGAGCTGGCTGTCTTTCACGATGCCCCCATAGGCTACGACGACTTCGTGGCCAACTGCAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CATCCAGTTTGAGGAGCTGCTGCAGAACGGGAGCCGCCACTTCGAGGACTGGATTGATCTGGAGCCAGAAGGAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GAGTGTATGTGATCATCGATCTCTCAGGGTCGTCGGGTGAAGCCCCTAAAGACAATGAAGAGCGTGTGTTCAGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GAACGCATGCGGCCGAGGAAGCGGCAGGGGGCCGTCAGGCGCAGGGTCCATCAGGTCAACGGCCACAAGTTCAT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GGCCACCTATCTTCGGCAGCCCACCTACTGCTCCCATTGCAGAGACTTCATCTGGGGTGTCATAGGAAAGCAGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GATACCAGTGTCAAGTCTGCACCTGCGTGGTCCACAAGCGGTGCCACGAGCTCATAATCACAAAGTGTGCTGGG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GTTAAGAAGCAGGAAACCCCCGAACAGGTGGGCTCCCAGCGGTTCAACCGTCACATGGCCCCAAAGTTCGGTAT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CCACAACTACAAGGTCCCTACCTTCTGCGATCACTGTGGGTCCCTGCTCTGGGGACTCTTGCGGCAGGGTTTGC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 AGTGTAAAGTCTGCAAAATGAATGTTCACCGTCGATGTGAGACCAACGTGGCTCCCAACTGTGGAGTGGATGCC 888
||| .||| ||| ||| |||.|||||
Sbjct 1 -----------------ATG--GGTT----GTC-ATG-----------------CCAGCTGTG----------- 22
Query 889 AGAGGAATCGCCAAAGTACTGGCC--------GACCTGGGCGTTACCCCAGACAAAATCACCAACAGCGGCCAG 954
||| ||..|| || ||| ||..||| ||..||||||
Sbjct 23 AGA--------CATTGT-CT-GCCTTGTCTTGGATTTGG----------------AAGAACCAAC--------- 61
Query 955 AGAAGGAAAAAGCTCATTGCTGGTGCCGAGTCCCCGCAGCCTGCTTCTGGAAGCTCACCATCTGAGGAAGATCG 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 62 ----------AGCTCATTGCTGGTGCCGAGTCCCCGCAGCCTGCTTCTGGAAGCTCACCATCTGAGGAAGATCG 125
Query 1029 ATCCAAGTCAGCACCCACCTCCCCTTGTGACCAGGAAATAAAAGAACTTGAGAACAACATTCGGAAAGCCTTGT 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 126 ATCCAAGTCAGCACCCACCTCCCCTTGTGACCAGGAAATAAAAGAACTTGAGAACAACATTCGGAAAGCCTTGT 199
Query 1103 CATTTGACAACCGAGGAGAGGAGCACCGGGCAGCATCGTCTCCTGATGGCCAGCTGATGAGCCCCGGTGAGAAT 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 200 CATTTGACAACCGAGGAGAGGAGCACCGGGCAGCATCGTCTCCTGATGGCCAGCTGATGAGCCCCGGTGAGAAT 273
Query 1177 GGCGAAGTCCGGCAAGGCCAGGCCAAGCGCCTGGGCCTGGATGAGTTCAACTTCATCAAGGTGTTGGGCAAAGG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274 GGCGAAGTCCGGCAAGGCCAGGCCAAGCGCCTGGGCCTGGATGAGTTCAACTTCATCAAGGTGTTGGGCAAAGG 347
Query 1251 CAGCTTTGGCAAGGTCATGTTGGCAGAACTCAAGGGCAAAGATGAAGTATATGCTGTGAAGGTCTTAAAGAAGG 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 348 CAGCTTTGGCAAGGTCATGTTGGCAGAACTCAAGGGCAAAGATGAAGTATATGCTGTGAAGGTCTTAAAGAAGG 421
Query 1325 ACGTCATCCTTCAGGATGATGACGTGGACTGCACAATGACAGAGAAGAGGATTTTGGCTCTGGCACGGAAACAC 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 ACGTCATCCTTCAGGATGATGACGTGGACTGCACAATGACAGAGAAGAGGATTTTGGCTCTGGCACGGAAACAC 495
Query 1399 CCGTACCTTACCCAACTCTACTGCTGCTTCCAGACCAAGGACCGCCTCTTTTTCGTCATGGAATATGTAAATGG 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 CCGTACCTTACCCAACTCTACTGCTGCTTCCAGACCAAGGACCGCCTCTTTTTCGTCATGGAATATGTAAATGG 569
Query 1473 TGGAGACCTCATGTTTCAGATTCAGCGCTCCCGAAAATTCGACGAGCCTCGTTCACGTTTCTATGCTGCAGAGG 1546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 570 TGGAGACCTCATGTTTCAGATTCAGCGCTCCCGAAAATTCGACGAGCCTCGTTCACGGTTCTATGCTGCAGAGG 643
Query 1547 TCACATCGGCCCTCATGTTCCTCCACCAGCATGGAGTCATCTACAGGGATTTGAAACTGGACAACATCCTTTCT 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 644 TCACATCGGCCCTCATGTTCCTCCACCAGCATGGAGTCATCTACAGGGATTTGAAACTGGACAACATCC-TTCT 716
Query 1621 GGATGCAGAAGGTCACTGCAAGCTGGCTGACTTCGGGATGTGCAAGGAAGGGATTCTGAATGGTGTGACGACCA 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 GGATGCAGAAGGTCACTGCAAGCTGGCTGACTTCGGGATGTGCAAGGAAGGGATTCTGAATGGTGTGACGACCA 790
Query 1695 CCACGTTCTGTGGGACTCCTGACTACATAGCTCCTGAGATCCTGCAGGAGTTGGAGTATGGCCCCTCCGTGGAC 1768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 791 CCACGTTCTGTGGGACTCCTGACTACATAGCTCCTGAGATCCTGCAGGAGTTGGAGTATGGCCCCTCCGTGGAC 864
Query 1769 TGGTGGGCCCTGGGGGTGCTGATGTACGAGATGATGGCTGGACAGCCTCCCTTTGAGGCCGACAATGAGGACGA 1842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 865 TGGTGGGCCCTGGGGGTGCTGATGTACGAGATGATGGCTGGACAGCCTCCCTTTGAGGCCGACAATGAGGACGA 938
Query 1843 CCTATTTGAGTCCATCCTCCATGACGACGTGCTGTACCCAGTCTGGCTCAGCAAGGAGGCTGTCAGCATCTTGA 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 CCTATTTGAGTCCATCCTCCATGACGACGTGCTGTACCCAGTCTGGCTCAGCAAGGAGGCTGTCAGCATCTTGA 1012
Query 1917 AAGCTTTCATGACGAAGAATCCCCACAAGCGCCTGGGCTGTGTGGCATCGCAGAATGGCGAGGACGCCATCAAG 1990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013 AAGCTTTCATGACGAAGAATCCCCACAAGCGCCTGGGCTGTGTGGCATCGCAGAATGGCGAGGACGCCATCAAG 1086
Query 1991 CAGCACCCATTCTTCAAAGAGATTGACTGGGTGCTCCTGGAGCAGAAGAAGATCAAGCCACCCTTCAAACCACG 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087 CAGCACCCATTCTTCAAAGAGATTGACTGGGTGCTCCTGGAGCAGAAGAAGATCAAGCCACCCTTCAAACCACG 1160
Query 2065 CATTAAAACCAAAAGAGACGTCAATAATTTTGACCAAGACTTTACCCGGGAAGAGCCGGTACTCACCCTTGTGG 2138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1161 CATTAAAACCAAAAGAGACGTCAATAATTTTGACCAAGACTTTACCCGGGAAGAGCCGGTACTCACCCTTGTGG 1234
Query 2139 ACGAAGCAATTGTAAAGCAGATCAACCAGGAGGAATTCAAAGGTTTCTCCTACTTTGGTGAAGACCTGATGCCC 2212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 ACGAAGCAATTGTAAAGCAGATCAACCAGGAGGAATTCAAAGGTTTCTCCTACTTTGGTGAAGACCTGATGCCC 1308
