Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14821
- Subject:
- NR_073473.2
- Aligned Length:
- 3042
- Identities:
- 755
- Gaps:
- 2286
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACTTCCTGGGGCCGCCGGCCGGGGCCGCTGGCTGCACTCAGCGCCGGAGCCGGGAGCTAGCGGCCGCCGCCAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCCACCAGACCGGCATCCAAGGGAAGAGCTGGGACAGTGGAGGCGACTGGGGCTTCAGTACGCTGTCGAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGCAAGTGAAGATGTTAAAGAGATCTTTGCCAGAGCCAGAAATGGAAAGTACAGACTTCTGAAAATATCTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAAAATGAGCAACTTGTGATTGGATCATATAGTCAGCCTTCAGATTCCTGGGATAAGGATTATGATTCCTTTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTTACCCCTGTTGGAGGACAAACAACCATGCTATATATTATTCAGGTTAGATTCTCAGAATGCCCAGGGATAT 370
Query 1 ---------------------------------------------------ATGTTGTATGCAGCAACAAGAGC 23
|||||||||||||||||||||||
Sbjct 371 GAATGGATATTCATTGCATGGTCTCCAGATCATTCTCATGTTCGTCAAAAAATGTTGTATGCAGCAACAAGAGC 444
Query 24 AACTCTGAAGAAGGAATTTGGAGGTGGCCACATTAAAGATGAAGTATTTGGAACAGTAAAGGAAGATGTATCAT 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AACTCTGAAGAAGGAATTTGGAGGTGGCCACATTAAAGATGAAGTATTTGGAACAGTAAAGGAAGATGTATCAT 518
Query 98 TACATGGATATAAAAAATACTTGCTGTCACAATCTTCCCCTGCCCCACTGACTGCAGCTGAGGAAGAACTACGA 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TACATGGATATAAAAAATACTTGCTGTCACAATCTTCCCCTGCCCCACTGACTGCAGCTGAGGAAGAACTACGA 592
Query 172 CAGATTAAAATCAATGAGGTACAGACTGATGTGGGTGTGGACACTAAGCATCAAACACTACAAGGAGTAGCATT 245
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGATTAAAATCAATGAGGTACAGACTGACGTGGGTGTGGACACTAAGCATCAAACACTACAAGGAGTAGCATT 666
Query 246 TCCCATTTCTCGAGAAGCCTTTCAGGCTTTGGAAAAATTGAATAATAGACAGCTCAACTATGTGCAGTTGGAAA 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCCCATTTCTCGAGAAGCCTTTCAGGCTTTGGAAAAATTGAATAATAGACAGCTCAACTATGTGCAGTTGGAAA 740
Query 320 TAGATATAAAAAATGAAATTATAATTTTGGCCAACACAACAAATACAGAACTGAAAGATTTGCCAAAGAGGATT 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TAGATATAAAAAATGAAATTATAATTTTGGCCAACACAACAAATACAGAACTGAAAGATTTGCCAAAGAGGATT 814
Query 394 CCCAAGGATTCAGCTCGTTACCATTTCTTTCTGTATAAACATTCCCATGAAGGAGACTATTTAGAGTCCATAGT 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCAAGGATTCAGCTCGTTACCATTTCTTTCTGTATAAACATTCCCATGAAGGAGACTATTTAGAGTCCATAGT 888
Query 468 TTTTATTTATTCAATGCCTGGATACACATGCAGTATAAGAGAGCGGATGCTGTATTCTAGCTGCAAGAGCCGTC 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTTATTTATTCAATGCCTGGATACACATGCAGTATAAGAGAGCGGATGCTGTATTCTAGCTGCAAGAGCCGTC 962
Query 542 TGCTAGAAATTGTAGAAAGACAACTACAAATGGATGTAATTAGAAAGATCGAGATAGACAATGGGGATGAGTTG 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGCTAGAAATTGTAGAAAGACAACTACAAATGGATGTAATTAGAAAGATCGAGATAGACAATGGGGATGAGTTG 1036
Query 616 ACTGCAGACTTCCTTTATGAAGAAGTACATCCCAAGCAGCATGCACACAAGCAAAGTTTTGCAAAACCAAAAGG 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACTGCAGACTTCCTTTATGAAGAAGTACATCCCAAGCAGCATGCACACAAGCAAAGTTTTGCAAAACCAAAAGG 1110
Query 690 TCCTGCAGGAAAAAGAGGAATTCGAAGACTAATTAGGGGCCCAGCGGAAACTGAAGCTACTACTGAT------- 756
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCCTGCAGGAAAAAGAGGAATTCGAAGACTAATTAGGGGCCCAGCGGAAACTGAAGCTACTACTGATTAAAGTC 1184
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1185 ATCACATTAAACATTGTAATACTAGTTTTTTAAAAGTCCAGCTTTTAGTACAGGAGAACTGAAATCATTCCATG 1258
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1259 TTGATATAAAGTAGGGAAAAAAATTGTACTTTTTGGAAAATAGCACTTTTCACTTCTGTGTGTTTTTAAAATTA 1332
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1333 ATGTTATAGAAGACTCATGATTTCTATTTTTGAGTTAAAGCTAGAAAAGGGTTCAACATAATGTTTAATTTTGT 1406
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1407 CACACTGTTTTCATAGCGTTGATTCCACACTTCAAATACTTCTTAAAATTTTATACAGTTGGGCCAGTTCTAGA 1480
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1481 AAGTCTGATGTCTCAAAGGGTAAACTTACTACTTTCTTGTGGGACAGAAAGACCTTAAAATATTCATATTACTT 1554
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1555 AATGAATATGTTAAGGACCAGGCTAGAGTATTTTCTAAGCTGGAAACTTAGTGTGCCTTGGAAAAGGCCGCAAG 1628
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1629 TTGCTTACTCCGAGTAGCTGTGCTAGCTCTGTCAGACTGTAGGATCATGTCTGCAACTTTTAGAAATAGTGCTT 1702
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1703 TATATTGCAGCAGTCTTTTATATTTGACTTTTTTTTAATAGCATTAAAATTGCAGATCAGCTCACTCTGAAACT 1776
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1777 TTAAGGGTACCAGATATTTTCTATACTGCAGGATTTCTGATGACATTGAAAGACTTTAAACAGCCTTAGTAAAT 1850
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1851 TATCTTTCTAATGCTCTGTGAGGCCAAACATTTATGTTCAGATTGAAATTTAAATTAATATCATTCAAAAGGAA 1924
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1925 ACAAAAAATGTTGAGTTTTAAAAATCAGGATTGACTTTTTTCTCCAAAACCATACATTTATGGGCAAATTGTGT 1998
Query 757 -------------------------------------------------------------------------- 756
Sbjct 1999 TCTTTATCACTTCCGAGCAAATACTCAGATTTAAAATTACTTTAAAGTCCTGGTACTTAACAGGCTAACGTAGA 2072
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2073 TAAACACCTTAATAATCTCAGTTAATACTGTATTTCAAAACACATTTAACTGTTTTCTAATGCTTTGCATTATC 2146
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2147 AGTTACAACCTAGAGAGATTTTGAGCCTCATATTTCTTTGATACTTGAAATAGAGGGAGCTAGAACACTTAATG 2220
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2221 TTTAATCTGTTAAACCTGCTGCAAGAGCCATAACTTTGAGGCATTTTCTAAATGAACTGTGGGGATCCAGGATT 2294
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2295 TGTAATTTCTTGATCTAAACTTTATGCTGCATAAATCACTTATCGGAAATGCACATTTCATAGTGTGAAGCACT 2368
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2369 CATTTCTAAACCTTATTATCTAAGGTAATATATGCACCTTTCAGAAATTTGTGTTCGAGTAAGTAAAGCATATT 2442
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2443 AGAATAATTGTGGGTTGACAGATTTTTAAAATAGAATTTAGAGTATTTGGGGTTTTGTTTGTTTACAAATAATC 2516
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2517 AGACTATAATATTTAAACATGCAAAATAACTGACAATAATGTTGCACTTGTTTACTAAAGATATAAGTTGTTCC 2590
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2591 ATGGGTGTACACGTAGACAGACACACATACACCCAAATTATTGCATTAAGAATCCTGGAGCAGACCATAGCTGA 2664
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2665 AGCTGTTATTTTCAGTCAGGAAGACTACCTGTCATGAAGGTATAAAATAATTTAGAAGTGAATGTTTTTCTGTA 2738
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2739 CCATCTATGTGCAATTATACTCTAAATTCCACTACACTACATTAAAGTAAATGGACATTCCAGAATATAGATGT 2812
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2813 GATTATAGTCTTAAACTAATTATTATTAAACCAATGATTGCTGAAAATCAGTGATGCATTTGTTATAGAGTATA 2886
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2887 ACTCATCGTTTACAGTATGTTTTAGTTGGCAGTATCATACCTAGATGGTGAATAACATATTCCCAGTAAATTTA 2960
Query 757 -------------------------------------------------------------------------- 756
Sbjct 2961 TATAGCAGTGAAGAATTACATGCCTTCTGGTGGACATTTTATAAGTGCATTTTATATCACAATAAAAATTTTTT 3034
Query 757 -------- 756
Sbjct 3035 CTCTTTAA 3042
