Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14923
- Subject:
- NM_032430.2
- Aligned Length:
- 2412
- Identities:
- 1575
- Gaps:
- 474
Alignment
Query 1 ATGACATCGACGGGG--AAGGACGGCGGCG-------------------------------------------- 28
|||.|.|| ||||| |||||.||.||.|
Sbjct 1 ATGTCGTC--CGGGGCCAAGGAGGGAGGTGGGGGCTCTCCCGCCTACCACCTCCCCCACCCCCACCCCCACCCA 72
Query 29 -CGCAGCACGCGCAGTATGTTGGGCCCTACCGGCTGGAGAAGACGCTGGGCAAGGGGCAGACAGGTCTGGTGAA 101
|.||||||||.||.|||||.||.|||||.|||||||||||||||||||||||.||.||||||||.|||||.||
Sbjct 73 CCCCAGCACGCCCAATATGTGGGCCCCTATCGGCTGGAGAAGACGCTGGGCAAAGGACAGACAGGGCTGGTTAA 146
Query 102 GCTGGGGGTTCACTGCGTCACCTGCCAGAAGGTGGCCATCAAGATCGTCAACCGTGAGAAGCTCAGCGAGTCGG 175
.||.|||||.||||||.||||..|.||||||||.||||||||||||||.|||||.||||||||....|||||||
Sbjct 147 ACTCGGGGTCCACTGCATCACGGGTCAGAAGGTCGCCATCAAGATCGTGAACCGGGAGAAGCTGTCGGAGTCGG 220
Query 176 TGCTGATGAAGGTGGAGCGGGAGATCGCGATCCTGAAGCTCATTGAGCACCCCCACGTCCTAAAGCTGCACGAC 249
||||||||||||||||||||||||||||.||||||||||||||.||.|||||.||.|||||.|||||.||||||
Sbjct 221 TGCTGATGAAGGTGGAGCGGGAGATCGCCATCCTGAAGCTCATCGAACACCCACATGTCCTCAAGCTCCACGAC 294
Query 250 GTTTATGAAAACAAAAAATATTTGTACCTGGTGCTAGAACACGTGTCAGGTGGTGAGCTCTTCGACTACCTGGT 323
||.||.||.|||||.|||||||||||||||||.||.||.|||||.||.||.||||||||.||||||||||||||
Sbjct 295 GTCTACGAGAACAAGAAATATTTGTACCTGGTTCTGGAGCACGTCTCGGGGGGTGAGCTATTCGACTACCTGGT 368
Query 324 GAAGAAGGGGAGGCTGACGCCTAAGGAGGCTCGGAAGTTCTTCCGGCAGATCATCTCTGCGCTGGACTTCTGCC 397
.|||||||||||.||||||||.||||||||.||.|||||||||||.|||||..|.|||||||||||||||||||
Sbjct 369 AAAGAAGGGGAGACTGACGCCCAAGGAGGCCCGAAAGTTCTTCCGCCAGATTGTGTCTGCGCTGGACTTCTGCC 442
Query 398 ACAGCCACTCCATATGCCACAGGGATCTGAAACCTGAAAACCTCCTGCTGGACGAGAAGAACAACATCCGCATC 471
|||||.|||||||.||||||||.||.||.||.||.||.|||||.||..||||.|||||.||||||||||||||.
Sbjct 443 ACAGCTACTCCATCTGCCACAGAGACCTAAAGCCCGAGAACCTGCTTTTGGATGAGAAAAACAACATCCGCATT 516
Query 472 GCAGACTTTGGCATGGCGTCCCTGCAGGTTGGCGACAGCCTGTTGGAGACCAGCTGTGGGTCCCCCCACTACGC 545
||||||||.||||||||||||||||||||.||.||||||||..|||||||||||||.|||||||||||.||.||
Sbjct 517 GCAGACTTCGGCATGGCGTCCCTGCAGGTGGGGGACAGCCTCCTGGAGACCAGCTGCGGGTCCCCCCATTATGC 590
Query 546 CTGCCCCGAGGTGATCCGGGGGGAGAAGTATGACGGCCGGAAGGCGGACGTGTGGAGCTGCGGCGTCATCCTGT 619
.||.||.||||||||...||||||.||.|||||.|||||...|||.|||.||||||||||.||.||||||||.|
Sbjct 591 GTGTCCAGAGGTGATTAAGGGGGAAAAATATGATGGCCGCCGGGCAGACATGTGGAGCTGTGGAGTCATCCTCT 664
Query 620 TCGCCTTGCTGGTGGGGGCTCTGCCCTTCGACGATGACAACTTGCGACAGCTGCTGGAGAAGGTGAAGCGGGGC 693
|||||.||||.|||||||||||||||||.||.||.||||||.|.||.||||||||||||||||||||.||||||
Sbjct 665 TCGCCCTGCTCGTGGGGGCTCTGCCCTTTGATGACGACAACCTCCGCCAGCTGCTGGAGAAGGTGAAACGGGGC 738
Query 694 GTGTTCCACATGCCGCACTTTATCCCGCCCGACTGCCAGAGTCTGCT-ACGGGCATGATCGAGGTGGACGCGGC 766
||.|||||||||||.|||||.||.||.||.||.||||||||.||.|| |.|||.||||||||.||||| ||
Sbjct 739 GTCTTCCACATGCCCCACTTCATTCCTCCAGATTGCCAGAGCCTCCTGAGGGGAATGATCGAAGTGGA----GC 808
Query 767 ACG------CGCTCACGCTAGAGCACATTCAGACCACAT--ATGGTATATAGGGGGCAAGAATGAGCCCGAACC 832
.|| .|||||..||.|||||.||||||| .|||| .|||||..||||.||.||..|.|||||.||.||
Sbjct 809 CCGAAAAAAGGCTCAGTCTGGAGCAAATTCAGA-AACATCCTTGGTACCTAGGCGGGAAACACGAGCCAGACCC 881
Query 833 ------AGAG-CAGCCCATTCCTCGCAAGG------TGCAGATCCGCTCGCTGC---CCAGCCTGGAGGACATC 890
.||| ||||||.|..| |||..|| |||.||.| |||| |||.| ||| ||..|.
Sbjct 882 GTGCCTGGAGCCAGCCCCTGGC-CGCCGGGTAGCCATGCGGAGC------CTGCCATCCAAC--GGA-GAGCTG 945
Query 891 GACCCCGACGTGCTGGACAGCAT-GCACTCACTGGGCTGCTTCCGAGACCGCAACAAGCTGCTGCAGGACCT-- 961
|||||||||||.||.||.||||| ||| |||||||||||||||.|.||||||.|.|.|||||..|..||.||
Sbjct 946 GACCCCGACGTCCTAGAGAGCATGGCA-TCACTGGGCTGCTTCAGGGACCGCGAGAGGCTGCATCGCGAGCTGC 1018
Query 962 GCTGTCCGAGGAGGAGAACCAGGAGAAGATGATTTACTTCCTCCTCCTGGACCGGAAAGAAAGGTACCCGAGCC 1035
||.|| ||||||||||||||.||.||||||||.||.|..||.||..||||.|||||.||..||||.||.|||.
Sbjct 1019 GCAGT--GAGGAGGAGAACCAAGAAAAGATGATATATTATCTGCTTTTGGATCGGAAGGAGCGGTATCCCAGCT 1090
Query 1036 AGGAGGATGAGGACCTGCCCCCCCGGAACGAGATAGACCCTCCCCGGAAGCGTGTGGACTCCCCGATGCTGAAC 1109
..|||||..||||||||||.||||||||.||..|.|||||.|||||||||||||||||.||.||.|||||||.|
Sbjct 1091 GTGAGGACCAGGACCTGCCTCCCCGGAATGATGTTGACCCCCCCCGGAAGCGTGTGGATTCTCCCATGCTGAGC 1164
Query 1110 CGGCACGGCAAGCGGCGGCCAGAACGCAAATCCATGGAGGTGCTCAGCGTGAC---------GGACGGCGGCTC 1174
||.|||||.||||||||.|||||.||.||.||||||||.||.||.|||.|.|| ||..||.|||||
Sbjct 1165 CGTCACGGGAAGCGGCGACCAGAGCGGAAGTCCATGGAAGTCCTGAGCATCACCGATGCCGGGGGTGGTGGCTC 1238
Query 1175 CCCGGTGCTTGCGCG--GGGCC-----CATCCCCCAATTTACGCA-AGGAAGAAA---------GTTTTT---- 1227
|||.||.|...|.|| ||||| .||..|||| ||| ||..|||.| ||...|
Sbjct 1239 CCCTGTACCCACCCGACGGGCCTTGGAGATGGCCCA------GCACAGCCAGAGATCCCGTAGCGTCAGTGGAG 1306
Query 1228 -------GGGT---TCCT---------TA--------AAGGGGGC-------TTCCT----------------- 1250
|||| |||| || ||||.|.| |||||
Sbjct 1307 CCTCCACGGGTCTGTCCTCCAGCCCTCTAAGCAGCCCAAGGAGTCCGGTCTTTTCCTTTTCACCGGAGCCGGGG 1380
Query 1251 --------TGAGGCT-------------------TTTCCCA---CCAGCC----CCATCCAGGAGGCCCCCG-- 1288
||||||| .||||.| .|||.| ||.||..|| ||||||.|
Sbjct 1381 GCTGGAGATGAGGCTCGAGGCGGGGGCTCCCCGACTTCCAAAACGCAGACGCTGCCTTCTCGG-GGCCCCAGGG 1453
Query 1289 --GGGGGCCCC------CTTAACCCCTTCCACCAAG-GGCCATTCC---CCCCTCCCC--CCCCCC-----CCC 1343
||||||.|| | |.||||..||.||.|| |.||..||| |||||.||| |||||| |||
Sbjct 1454 GTGGGGGCGCCGGGGAGC--AGCCCCCGCCCCCCAGTGCCCGCTCCACACCCCTGCCCGGCCCCCCAGGCTCCC 1525
Query 1344 C------------AGGGA------------CACCTGTCCACACGCCAAAGGAGAGCCCGGCTGGCACGCCCA-- 1391
| .|||| |.|||.|.||||||| ||||| |.||..||||
Sbjct 1526 CGCGCTCCTCTGGCGGGACCCCCTTGCACTCGCCTCTGCACACGC----------CCCGG--GCCAGTCCCACC 1587
Query 1392 ---ACCCC-----CAAGGCCCCCGTCCAGCCCC------AGCGTCGGAGGGGTGC--CCTGGAGGGCGCGGCTC 1449
||||| |||..||.||..|||||||| .|||||| ||||.|| ||||||||...||.|||
Sbjct 1588 GGGACCCCGGGGACAACACCACCCCCCAGCCCCGGCGGTGGCGTCG--GGGGAGCCGCCTGGAGGAGTCGTCTC 1659
Query 1450 AACTCCATCAAGAACAGCTTTCTGGGCTCACCCCGCTTCCACCGCCGGAAACTGCAAGTTCCGACGCCGGAGGA 1523
|||||||||...||||||||.||||||||.||.|||||.|||||.||.||..||||.||.||.||..|.|||||
Sbjct 1660 AACTCCATCCGCAACAGCTTCCTGGGCTCCCCTCGCTTTCACCGGCGCAAGATGCAGGTCCCTACCGCTGAGGA 1733
Query 1524 GATGTCCAACCTGACACCAGAGTCGTCCCCAGAGCTGGCGAAGAAG-TCCTGGTTTGGGAACTTCATCAGCCTG 1596
||||||||.|.||||.||||||||.|||||.|||||||| ||.|.| ||||||||.||||||||||||..|.||
Sbjct 1734 GATGTCCAGCTTGACGCCAGAGTCCTCCCCGGAGCTGGC-AAAACGCTCCTGGTTCGGGAACTTCATCTCCTTG 1806
Query 1597 GAGAAGGAGGAGCAGATCTTCGTGGTCATCAAAGACAAACCTCTGAGCTCCATCAAGGCTGACATCGTGCACGC 1670
||.||.||.||.||.||.|||.|.||..|.||.|||||||||||.|||..||||||.||.||||||||.||.||
Sbjct 1807 GACAAAGAAGAACAAATATTCCTCGTGCTAAAGGACAAACCTCTCAGCAGCATCAAAGCAGACATCGTCCATGC 1880
Query 1671 CTTCCTGTCGATTCCCAGTCTCAGCCACAGCGTCATCTCCCAAACGAGCTTCCGGGCCGAGTACAAGGCCACGG 1744
|||.||||||||.|||||.||.||.|||||.||..|.||.||.||.||||||.||||||||||||||||||..|
Sbjct 1881 CTTTCTGTCGATCCCCAGCCTGAGTCACAGTGTGCTGTCACAGACCAGCTTCAGGGCCGAGTACAAGGCCAGTG 1954
Query 1745 GGGGGCCAGCCGTGTTCCAGAAGCCGGTCAAGTTCCAGGTTGATATCACCTACACGGAGGGT------------ 1806
|.||.||..||||.|||||.|||||.|||...||||||||.||.||||.||.|.|.||||||
Sbjct 1955 GCGGCCCCTCCGTCTTCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTCCTCTGAGGGTCCAGAGCCCTCC 2028
Query 1807 -------GGGGAGGC-GCAGAAGGAGAACGGCATCTACTCCGTCACCTTCACCCTGCTCTCAGGCCCCAGCCGT 1872
|||..||| ||.||.|..| .|||||||||||||||||||||||.||..||||.||.|||||||||
Sbjct 2029 CCGCGACGGGACGGCAGCGGAGGTGG--TGGCATCTACTCCGTCACCTTCACTCTCATCTCGGGTCCCAGCCGT 2100
Query 1873 CGCTTCAAGAGGGTGGTGGAGACCATCCAGGCCCAGCTGCTGAGCACACACGACCCGCC-----TGC-GGCCCA 1940
||.||||||.|.||||||||||||||||||||.|||||.||||||||.||.||||.||| ||| |||||
Sbjct 2101 CGGTTCAAGCGAGTGGTGGAGACCATCCAGGCACAGCTCCTGAGCACTCATGACCAGCCCTCCGTGCAGGCCC- 2173
Query 1941 GCACTTGTCAGACACCACTAACTGTATGGAAATGATGACGGGG--------CGGCTTTCCAAATGTGGAATT-- 2004
||.||||| ||.|.|| |||||| ||||.|.| ||| |
Sbjct 2174 -----TGGCAGAC---------------GAGAAGA--ACGGGGCCCAGACCCGGCCTGC------TGG---TGC 2216
Query 2005 ---ATCCCGAAAAGT----------------------------------------------------------- 2016
|.||||||...|
Sbjct 2217 CCCACCCCGAAGCCTGCAGCCCCCACCCGGCCGCCCAGACCCAGAGCTGAGCAGCTCTCCCCGCCGAGGCCCCC 2290
Query 2017 -------------------------------------------- 2016
Sbjct 2291 CCAAGGACAAGAAGCTCCTGGCCACCAACGGGACCCCTCTGCCC 2334