Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14950
- Subject:
- XM_024446892.1
- Aligned Length:
- 1445
- Identities:
- 861
- Gaps:
- 565
Alignment
Query 1 ATGAGAGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAG 74
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGCGATGTTACCATTGTGAAAGAAGGTTGGGTTCAGAAGAGGGGAGAATATATAAAAAACTGGAGGCCAAG 74
Query 75 ATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCTCAAGATGTGGATTTACCTTATC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATACTTCCTTTTGAAGACAGATGGCTCATTCATAGGATATAAAGAGAAACCTCAAGATGTGGATTTACCTTATC 148
Query 149 CCCTCAACAACTTTTCAGTGGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATAATC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCTCAACAACTTTTCAGTGGCAAAATGCCAGTTAATGAAAACAGAACGACCAAAGCCAAACACATTTATAATC 222
Query 223 AGATGTCTCCAGTGGACTACTGTTATAGAGAGAACATTTCATGTAGATACTCCAGAGGAAAGGGAAGAATGGAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGATGTCTCCAGTGGACTACTGTTATAGAGAGAACATTTCATGTAGATACTCCAGAGGAAAGGGAAGAATGGAC 296
Query 297 AGAAGCTATCCAGGCTGTAGCAGACAGACTGCAGAGGCAAGAAGAGGAGAGAATGAATTGTAGTCCAACTTCAC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAAGCTATCCAGGCTGTAGCAGACAGACTGCAGAGGCAAGAAGAGGAGAGAATGAATTGTAGTCCAACTTCAC 370
Query 371 AAATTGATAATATAGGAGAGGAAGAGATGGATGCCTCTACAACCCATCATAAAAGAAAGACAATGAATGATTTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAATTGATAATATAGGAGAGGAAGAGATGGATGCCTCTACAACCCATCATAAAAGAAAGACAATGAATGATTTT 444
Query 445 GACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAATA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACTATTTGAAACTACTAGGTAAAGGCACTTTTGGGAAAGTTATTTTGGTTCGAGAGAAGGCAAGTGGAAAATA 518
Query 519 CTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTAACTGAAAGCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTATGCTATGAAGATTCTGAAGAAAGAAGTCATTATTGCAAAGGATGAAGTGGCACACACTCTAACTGAAAGCA 592
Query 593 GAGTATTAAAGAACACTAGACATCCCTTTTTAACATCCTTGAANTATNCNTNCCAGANAAAAGACNGTTTGTGT 666
|||||||||||||||||||||||||||||||||||||||||||.|||.|.|.|||||.|||||||.||||||||
Sbjct 593 GAGTATTAAAGAACACTAGACATCCCTTTTTAACATCCTTGAAATATTCCTTCCAGACAAAAGACCGTTTGTGT 666
Query 667 TTTGTGATGGAATATGTTANNGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCTGAGGACCG 740
|||||||||||||||||||..|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTTGTGATGGAATATGTTAATGGGGGCGAGCTGTTTTTCCATTTGTCGAGAGAGCGGGTGTTCTCTGAGGACCG 740
Query 741 CACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATTCCCGGNAAGATTTGTGGTACCGTG 814
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||.|||| |||| ||||||||
Sbjct 741 CACACGTTTCTATGGTGCAGAAATTGTCTCTGCCTTGGACTATCTACATT-CCGGAAAGA-TTGT-GTACCGTG 811
Query 815 ATCTCAA--GTTGGAGAATCTAATGCTGGACAAAGATGGCCACATAAAAATTACAGATTTTGGACTTTGCAAAG 886
||||||| ||||| ||.|.|| ||| ||.|||||
Sbjct 812 ATCTCAAGGGTTGG------TATTTCT-----------------------TTA-------------TTACAAAG 843
Query 887 AAGGGATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAGAATATCTGGC---ACCAGAGGTGTTA 957
|| .|||| .||| ||.||||| || ||| |||
Sbjct 844 AA----------CTGCA--------AAAG-----------------AGGATATC--GCCTTACC-------TTA 873
Query 958 GAAGATAATGACTATGGCCGAGCAGTAGACTGGTGGGGCCTAGGGGTTGTCATGTATGAAATGATGTGTGGGAG 1031
.||.|||| ||.|
Sbjct 874 CAAAATAA-GATT------------------------------------------------------------- 885
Query 1032 GTTACCTTTCTACAACCAGGACCATGAGAAACTTTTTGAATTAATATTAATGGAAGACATTAAATTTCCTCGAA 1105
Sbjct 886 -------------------------------------------------------------------------- 885
Query 1106 CACTCTCTTCAGATGCAAAATCATTGCTTTCAGGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGA 1179
Sbjct 886 -------------------------------------------------------------------------- 885
Query 1180 CCAGATGATGCAAAAGAAATTATGAGACACAGTTTCTTCTCTGGAGTAAACTGGCAAGATGTATATGATAAAAA 1253
Sbjct 886 -------------------------------------------------------------------------- 885
Query 1254 GCTTGTACCTCCTTTTAAACCTCAAGTAACATCTGAGACAGATACTAGATATTTTGATGAAGAATTTACAGCTC 1327
Sbjct 886 -------------------------------------------------------------------------- 885
Query 1328 AGACTATTACAATAACACCACCTGAAAAATATGATGAGGATGGTATGGACTGCATGGACAATGAGAGGCGGCCG 1401
Sbjct 886 -------------------------------------------------------------------------- 885
Query 1402 CATTTCCCTCAATTTTCCTACTCTGCAAGTGGACGAGAA 1440
Sbjct 886 --------------------------------------- 885