Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14996
Subject:
NM_001371575.1
Aligned Length:
2785
Identities:
1403
Gaps:
1381

Alignment

Query    1  ATGAAGAAGTTTTTCGACTCCCGGCGAGAGCAGGGCGGCTCTGGCCTGGGCTCCGGCTCCAGCGGAGGAGGGGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGAAGTTTTTCGACTCCCGGCGAGAGCAGGGCGGCTCTGGCCTGGGCTCCGGCTCCAGCGGAGGAGGGGG  74

Query   75  CAGCACCTCGGGCCTGGGCAGTGGCTACATCGGAAGAGTCTTCGGCATCGGGCGACAGCAGGTCACAGTGGACG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCACCTCGGGCCTGGGCAGTGGCTACATCGGAAGAGTCTTCGGCATCGGGCGACAGCAGGTCACAGTGGACG  148

Query  149  AGGTGTTGGCGGAAGGTGGATTTGCTATTGTATTTCTGGTGAGGACAAGCAATGGGATGAAATGTGCCTTGAAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGTGTTGGCGGAAGGTGGATTTGCTATTGTATTTCTGGTGAGGACAAGCAATGGGATGAAATGTGCCTTGAAA  222

Query  223  CGCATGTTTGTCAACAATGAGCATGATCTCCAGGTGTGCAAGAGAGAAATCCAGATAATGAGGGATCTTTCAGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGCATGTTTGTCAACAATGAGCATGATCTCCAGGTGTGCAAGAGAGAAATCCAGATAATGAGGGATCTTTCAGG  296

Query  297  GCACAAGAATATTGTGGGTTACATTGATTCTAGTATCAACAACGTGAGTAGCGGTGATGTATGGGAAGTGCTCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCACAAGAATATTGTGGGTTACATTGATTCTAGTATCAACAACGTGAGTAGCGGTGATGTATGGGAAGTGCTCA  370

Query  371  TTCTGATGGACTTTTGTAGAGGTGGCCAGGTGGTAAACCTGATGAACCAGCGCCTGCAAACAGGCTTTACAGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTCTGATGGACTTTTGTAGAGGTGGCCAGGTGGTAAACCTGATGAACCAGCGCCTGCAAACAGGCTTTACAGAG  444

Query  445  AATGAAGTGCTCCAGATATTTTGTGATACCTGTGAAGCTGTTGCCCGCCTGCATCAGTGCAAAACTCCTATTAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AATGAAGTGCTCCAGATATTTTGTGATACCTGTGAAGCTGTTGCCCGCCTGCATCAGTGCAAAACTCCTATTAT  518

Query  519  CCACCGGGACCTGAAGGTTGAAAACATCCTCTTGCATGACCGAGGCCACTATGTCCTGTGTGACTTTGGAAGCG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCACCGGGACCTGAAGGTTGAAAACATCCTCTTGCATGACCGAGGCCACTATGTCCTGTGTGACTTTGGAAGCG  592

Query  593  CCACCAACAAATTCCAGAATCCACAAACTGAGGGAGTCAATGCAGTAGAAGATGAGATTAAGAAATACACAACG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCACCAACAAATTCCAGAATCCACAAACTGAGGGAGTCAATGCAGTAGAAGATGAGATTAAGAAATACACAACG  666

Query  667  CTGTCCTATCGAGCACCAGAAATGGTCAACCTGTACAGTGGCAAAATCATCACTACGAAGGCAGACATTTGGGC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTGTCCTATCGAGCACCAGAAATGGTCAACCTGTACAGTGGCAAAATCATCACTACGAAGGCAGACATTTGGGC  740

Query  741  TCTTGGATGTTTGTTGTATAAATTATGCTACTTCACTTTGCCATTTGGGGAAAGTCAGGTGGCAATTTGTGATG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCTTGGATGTTTGTTGTATAAATTATGCTACTTCACTTTGCCATTTGGGGAAAGTCAGGTGGCAATTTGTGATG  814

Query  815  GAAACTTCACAATTCCTGATAATTCTCGATATTCTCAAGACATGCACTGCCTAATTAGGTATATGTTGGAACCA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAAACTTCACAATTCCTGATAATTCTCGATATTCTCAAGACATGCACTGCCTAATTAGGTATATGTTGGAACCA  888

Query  889  GACCCTGACAAAAGGCCGGATATTTACCAGGTGTCCTACTTCTCATTTAAGCTACTCAAGAAAGAGTGCCCAAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GACCCTGACAAAAGGCCGGATATTTACCAGGTGTCCTACTTCTCATTTAAGCTACTCAAGAAAGAGTGCCCAAT  962

Query  963  TCCAAATGTACAGAACTCTCCCATTCCTGCAAAGCTTCCTGAACCAGTGAAAGCCAGTGAGGCAGCTGCAAAAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCCAAATGTACAGAACTCTCCCATTCCTGCAAAGCTTCCTGAACCAGTGAAAGCCAGTGAGGCAGCTGCAAAAA  1036

Query 1037  AGACCCAGCCAAAGGCCAGACTGACAGATCCCATTCCCACCACAGAGACTTCAATTGCACCCCGCCAGAGGCCT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGACCCAGCCAAAGGCCAGACTGACAGATCCCATTCCCACCACAGAGACTTCAATTGCACCCCGCCAGAGGCCT  1110

Query 1111  AAAGCTGGGCAGACTCAGCCGAACCCAGGAATCCTTCCCATCCAGCCAGCGCTGACACCCCGGAAGAGGGCCAC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAAGCTGGGCAGACTCAGCCGAACCCAGGAATCCTTCCCATCCAGCCAGCGCTGACACCCCGGAAGAGGGCCAC  1184

Query 1185  TGTTCAGCCCCCACCTCAGGCTGCAGGATCCAGCAATCAGCCTGGCCTTTTAGCCAGTGTTCCCCAACCAAAAC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGTTCAGCCCCCACCTCAGGCTGCAGGATCCAGCAATCAGCCTGGCCTTTTAGCCAGTGTTCCCCAACCAAAAC  1258

Query 1259  CCCAAGCCCCACCCAGCCAGCCTCTGCCGCAAACTCAGGCCAAGCAGCCACAGGCTCCTCCCACTCCACAGCAG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCCAAGCCCCACCCAGCCAGCCTCTGCCGCAAACTCAGGCCAAGCAGCCACAGGCTCCTCCCACTCCACAGCAG  1332

Query 1333  ACGCCTTCTACTCAGGCCCAGGGTCTGCCCGCTCAGGCCCAGGCCACACCCCAGCACCAGCAGCATACAATAAA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |
Sbjct 1333  ACGCCTTCTACTCAGGCCCAGGGTCTGCCCGCTCAGGCCCAGGCCACACCCCAGCACCAGCAGC---------A  1397

Query 1407  ACTTAGTATGAAACTTT---------------------------------------------------------  1423
            |||          |||.                                                         
Sbjct 1398  ACT----------CTTCCTCAAGCAGCAACAGCAGCAGCAACAGCCACCGCCAGCACAGCAGCAGCCGGCAGGC  1461

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 1462  ACGTTTTACCAGCAGCAGCAGGCCCAGACTCAGCAGTTTCAGGCAGTACATCCAGCAACCCAGAAACCAGCAAT  1535

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 1536  TGCTCAGTTCCCTGTGGTGTCCCAAGGAGGCTCTCAACAGCAGCTAATGCAGAATTTCTACCAGCAGCAGCAGC  1609

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 1610  AGCAGCAACAACAACAGCAACAGCAACAGCTGGCCACAGCCCTGCATCAACAACAGCTGATGACTCAGCAGGCT  1683

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 1684  GCCTTGCAGCAAAAGCCCACTATGGCAGCAGGACAGCAGCCCCAGCCACAGCCAGCTGCAGCCCCACAGCCAGC  1757

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 1758  CCCTGCCCAGGAGCCAGCGATTCAAGCCCCAGTAAGACAACAGCCAAAGGTTCAGACAACCCCACCTCCTGCCG  1831

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 1832  TCCAGGGGCAGAAAGTTGGATCTCTCACTCCACCCTCATCCCCCAAAACCCAACGTGCTGGGCACAGGCGTATT  1905

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 1906  CTCAGTGACGTAACCCACAGTGCAGTCTTTGGGGTCCCTGCCAGCAAATCAACCCAGCTGCTCCAGGCAGCTGC  1979

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 1980  AGCTGAGGCCAGTCTCAATAAGTCCAAGTCTGCAACCACCACTCCATCAGGCTCTCCTCGGACCTCTCAACAAA  2053

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2054  ACGTTTATAATCCTTCAGAAGGGTCTACGTGGAATCCCTTTGATGACGATAATTTCTCCAAACTCACAGCTGAA  2127

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2128  GAACTGCTAAACAAGGACTTTGCCAAGCTTGGGGAAGGCAAACATCCCGAGAAGCTTGGAGGCTCAGCTGAGAG  2201

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2202  TTTGATCCCAGGCTTTCAATCAACCCAAGGTGATGCTTTTGCTACGACCTCATTTTCTGCTGGAACTGCTGAAA  2275

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2276  AAAGGAAGGGTGGGCAGACTGTGGACTCTGGCCTCCCGCTTCTAAGCGTGTCTGATCCTTTCATTCCTCTTCAA  2349

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2350  GTACCTGATGCACCAGAAAAACTAATTGAGGGACTCAAATCTCCTGACACTTCTCTTCTGCTCCCTGACCTCTT  2423

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2424  GCCTATGACAGATCCTTTTGGTAGCACTTCTGATGCTGTAATTGAAAAAGCTGATGTTGCTGTTGAGAGTCTCA  2497

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2498  TACCAGGACTGGAGCCCCCAGTTCCCCAGCGCCTCCCATCTCAGACGGAATCTGTGACCTCGAATCGCACAGAA  2571

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2572  GATAGTAATCTCATCTCAGGTTTTGATGTCCCTGAGGGCTCGGACAAGGTGGCTGAAGATGAGTTTGACCCTAT  2645

Query 1424  --------------------------------------------------------------------------  1423
                                                                                      
Sbjct 2646  TCCTGTATTGATAACCAAAAACCCACAAGGTGGGCACTCTAGAAACAGCAGTGGGAGCTCTGAGTCCAGTCTTC  2719

Query 1424  -----------------------------------------------  1423
                                                           
Sbjct 2720  CCAACCTAGCCAGGTCTTTACTGCTGGTGGATCAGCTCATAGACCTG  2766

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