Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15079
Subject:
XM_011242704.1
Aligned Length:
1401
Identities:
864
Gaps:
480

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGACCATTCTAATAGGGAAAAGGATGATAGACAACGGACAACTAAAACCATGGCACAAAGGAATACACACTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCGAGACCATCTGGCACTTCAACATCCTCTGGGGTTCTCATGGTGGGACCCAACTTCAGGGTTGGCAAGAAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TAGGGTGTGGGAACTTCGGAGAGCTCAGATTAGGTAAAAATCTCTACACCAATGAATATGTAGCCATTAAACTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAACCAATAAAATCACGTGCTCCACAACTTCATTTAGAGTACAGGTTTTATAAACAGCTTGGCAGTGCAGGTGA  296

Query    1  -------------------------------------------------ATGGTGCTGGAGCTCCTTGGCCCTA  25
                                                             |||||||||||.|||||||||||||
Sbjct  297  AGGCCTCCCACAGGTTTATTACTTTGGACCATGTGGGAAGTACAATGCCATGGTGCTGGAACTCCTTGGCCCTA  370

Query   26  GCTTGGAGGACTTGTTTGACCTCTGTGACCGAACATTTACTTTGAAGACGGTGTTAATGATAGCCATCCAGCTG  99
            |||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||.||
Sbjct  371  GCTTGGAAGACTTGTTTGACCTCTGTGACCGAACGTTTACTTTGAAGACGGTGTTAATGATAGCCATCCAGTTG  444

Query  100  CTTTCTCGAATGGAATACGTGCACTCAAAGAACCTCATTTACCGAGATGTCAAGCCAGAGAACTTCCTGATTGG  173
            ||||||||||||||.||.||.|||||||||||.||.|||||||||||||||||.||||||||||||.|||||||
Sbjct  445  CTTTCTCGAATGGAGTATGTACACTCAAAGAATCTTATTTACCGAGATGTCAAACCAGAGAACTTCTTGATTGG  518

Query  174  TCGACAAGGCAATAAGAAAGAGCATGTTATACACATTATAGACTTTGGACTGGCCAAGGAATACATTGACCCCG  247
            .||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||..||||.||.|
Sbjct  519  CCGACAAGGCAATAAGAAAGAGCATGTAATACACATTATAGATTTTGGACTGGCCAAGGAATATGTTGATCCTG  592

Query  248  AAACCAAAAAACACATACCTTATAGGGAACACAAAAGTTTAACTGGAACTGCAAGATATATGTCTATCAACACG  321
            ||||||||||||||||||||||.||.||.|||||||||||.|||||||||||.|||||.||||||||||||||.
Sbjct  593  AAACCAAAAAACACATACCTTACAGAGAGCACAAAAGTTTGACTGGAACTGCGAGATACATGTCTATCAACACA  666

Query  322  CATCTTGGCAAAGAGCAAAGCCGGAGAGATGATTTGGAAGCCCTAGGCCATATGTTCATGTATTTCCTTCGAGG  395
            |||||.||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||.|||||.|||||
Sbjct  667  CATCTAGGCAAAGAGCAAAGCCGGCGAGATGATTTGGAAGCCTTAGGCCATATGTTCATGTACTTCCTCCGAGG  740

Query  396  CAGCCTCCCCTGGCAAGGACTCAAGGCTGACACATTAAAAGAGAGATATCAAAAAATTGGTGACACCAAAAGGA  469
            ||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.||||||||||
Sbjct  741  CAGCCTACCCTGGCAAGGACTCAAGGCTGATACATTAAAAGAGAGATATCAAAAAATCGGTGATACCAAAAGGA  814

Query  470  ATACTCCCATTGAAGCTCTCTGTGAGAACTTTCCAGAGGAGATGGCAACCTACCTTCGATATGTCAGGCGACTG  543
            ||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.
Sbjct  815  ATACTCCCATCGAAGCTCTCTGTGAGAACTTTCCAGAGGAGATGGCAACCTACCTTCGATATGTCAGGCGATTA  888

Query  544  GACTTCTTTGAAAAACCTGATTATGAGTATTTACGGACCCTCTTCACAGACCTCTTTGAAAAGAAAGGCTACAC  617
            ||||||||||||||||||||||||||||||||||||||||||||||||||.||.||||||..|||||||||.||
Sbjct  889  GACTTCTTTGAAAAACCTGATTATGAGTATTTACGGACCCTCTTCACAGATCTGTTTGAACGGAAAGGCTATAC  962

Query  618  CTTTGACTATGCCTATGATTGGGTTGGGAGACCTATTCCTACTCCAGTAGGGTCAGTTCACGTAGATTCTGGTG  691
            |||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||||.|||||||||||||
Sbjct  963  CTTTGACTATGCCTATGATTGGGTTGGAAGGCCTATTCCTACTCCAGTAGGATCAGTTCATGTAGATTCTGGTG  1036

Query  692  CATCTGCAATAACTCGAGAAAGCCACACACATAGGGATCGGCCATCACAACAGCAGCCTCTTCGAAAT------  759
            |||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||.|||||      
Sbjct 1037  CATCTGCAATAACTCGAGAAAGCCACACACACAGGGATCGGCCATCACAACAACAGCCTCTTAGAAATCAGACT  1110

Query  760  --------------------------------------------------------------------------  759
                                                                                      
Sbjct 1111  ACATCATCAGAGCGCCGAGGAGAGTGGGAAATCCAGCCCAGCCGGCAGACCAATACCTCATACCTGACGTCTCA  1184

Query  760  -------------------------------CAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGTTGATGATC  802
                                           |||||||||||||||||||||||||||||||||||.|||||.|
Sbjct 1185  CTTGGCCGCAGACCGCCATGGGGGTTCAGTACAGGTGGTTAGCTCAACCAATGGAGAGCTGAATGTCGATGACC  1258

Query  803  CCACGGGAGCCCACTCCAATGCACCAATCACAGCTCATGCCGAGGTGGAGGTAGTGGAGGAAGCTAA-------  869
            ||||.|||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||||       
Sbjct 1259  CCACTGGAGCTCACTCCAATGCACCAATCACAGCTCATGCCGAAGTGGAGGTAGTGGAGGAAGCTAACTGCCTG  1332

Query  870  -----------------GTGCTGCTGTTTCTTTAAGAGGAAAAGGAAGAAGACTGCTCAGCGCCACAAG  921
                             ||||||||||||||||||||||||||||||||||||.||.|||||.||||||
Sbjct 1333  AAAATGCTCAACCTGTGGTGCTGCTGTTTCTTTAAGAGGAAAAGGAAGAAGACAGCCCAGCGACACAAG  1401

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