Construct: ORF ccsbBroad304_15079

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016550.2_s304c1, BRDN0000459654
Derived from:
ccsbBroadEn_15079
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CSNK1G1 (53944)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15079
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329606.2 72.7% 72.7% 1_345del
2 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_022048.5 72.7% 72.7% 1_345del
3 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329607.2 67.2% 67.3% (many diffs)
4 human 53944 CSNK1G1 casein kinase 1 gamma 1 NM_001329605.2 62% 62.1% (many diffs)
5 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242710.1 68.2% 72.2% (many diffs)
6 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242709.1 66.9% 70.6% (many diffs)
7 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 NM_173185.2 62.7% 66.4% (many diffs)
8 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242708.1 62.7% 66.4% (many diffs)
9 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_017313273.1 61.8% 63.3% (many diffs)
10 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_006511008.2 61.6% 65% (many diffs)
11 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242703.1 61.6% 65% (many diffs)
12 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242704.1 61.6% 65% (many diffs)
13 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242705.1 61.6% 65% (many diffs)
14 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242706.1 61.6% 65% (many diffs)
15 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242707.1 61.6% 65% (many diffs)
16 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242711.1 59.5% 59.6% (many diffs)
17 mouse 214897 Csnk1g1 casein kinase 1, gamma 1 XM_011242712.1 58.7% 61.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
987
ORF length:
921
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggt gctggagctc cttggcccta gcttggagga cttgtttgac ctctgtgacc
121gaacatttac tttgaagacg gtgttaatga tagccatcca gctgctttct cgaatggaat
181acgtgcactc aaagaacctc atttaccgag atgtcaagcc agagaacttc ctgattggtc
241gacaaggcaa taagaaagag catgttatac acattataga ctttggactg gccaaggaat
301acattgaccc cgaaaccaaa aaacacatac cttataggga acacaaaagt ttaactggaa
361ctgcaagata tatgtctatc aacacgcatc ttggcaaaga gcaaagccgg agagatgatt
421tggaagccct aggccatatg ttcatgtatt tccttcgagg cagcctcccc tggcaaggac
481tcaaggctga cacattaaaa gagagatatc aaaaaattgg tgacaccaaa aggaatactc
541ccattgaagc tctctgtgag aactttccag aggagatggc aacctacctt cgatatgtca
601ggcgactgga cttctttgaa aaacctgatt atgagtattt acggaccctc ttcacagacc
661tctttgaaaa gaaaggctac acctttgact atgcctatga ttgggttggg agacctattc
721ctactccagt agggtcagtt cacgtagatt ctggtgcatc tgcaataact cgagaaagcc
781acacacatag ggatcggcca tcacaacagc agcctcttcg aaatcaggtg gttagctcaa
841ccaatggaga gctgaatgtt gatgatccca cgggagccca ctccaatgca ccaatcacag
901ctcatgccga ggtggaggta gtggaggaag ctaagtgctg ctgtttcttt aagaggaaaa
961ggaagaagac tgctcagcgc cacaagtgcc caactttctt gtacaaagtg gttggtaagc
1021ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
1081ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)