Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15119
- Subject:
- NR_158989.2
- Aligned Length:
- 3727
- Identities:
- 1569
- Gaps:
- 2158
Alignment
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1 GCTAATTCCCCGCTACCGGGTTGCGGCCGGAAGCCGGGCGCCGCGGCTCTGCTTCCCTCGGGGATCTGGCGACA 74
Query 2 TGGCCAGAAAGGCTCTCAAGCTTGCTTCGTGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAGT 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGCCAGAAAGGCTCTCAAGCTTGCTTCGTGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAGT 148
Query 76 AACAAGTACTTGGACCCTAATGACTTTGGCGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCAG 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AACAAGTACTTGGACCCTAATGACTTTGGCGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCAG 222
Query 150 TTACGACTACCTCACTTCCCTGAAGAGTGTCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTGC 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTACGACTACCTCACTTCCCTGAAGAGTGTCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTGC 296
Query 224 ACCTTCGCTCTGCCAGGCGTCTCTGTGAGCTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCAC 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACCTTCGCTCTGCCAGGCGTCTCTGTGAGCTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCAC 370
Query 298 CTGGGGGCTCTGGACTACCTGTTGCCAGAGGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCACA 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGGGGGCTCTGGACTACCTGTTGCCAGAGGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCACA 444
Query 372 GAGCAGCATGCAAGAGATCCGCCAGGTCATCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGCT 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGCAGCATGCAAGAGATCCGCCAGGTCATCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGCT 518
Query 446 TCGATGACACCCCTCTGGGGACGGCCTCCCTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGTG 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGATGACACCCCTCTGGGGACGGCCTCCCTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGTG 592
Query 520 GCCGTGAAGGTCCAGCACCCAAAGGTGCGGGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCT 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCGTGAAGGTCCAGCACCCAAAGGTGCGGGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCT 666
Query 594 GGCTGTGAAGCAGCTGTTCCCAGAGTTTGAGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGG 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCTGTGAAGCAGCTGTTCCCAGAGTTTGAGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGG 740
Query 668 AGCTGGATTTCCTCAATGAAGGGAGGAATGCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAG 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCTGGATTTCCTCAATGAAGGGAGGAATGCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAG 814
Query 742 GTCCCCCGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAA 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTCCCCCGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAA 888
Query 816 TGACAGAGACTACATGGAGAGGAACAAGATCGACGTCAAT---------------------------------- 855
||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGACAGAGACTACATGGAGAGGAACAAGATCGACGTCAATGAGGTGAGGTCAAGAGCTCAGGGCTGCTGTGCCG 962
Query 856 -------------------------------------------------------------------------- 855
Sbjct 963 GGGAACGTGGGCTTGGTCAAGGCTGCCCAGGAAGTGCCTGTGTGTCCAGGTGAGGCCTCAGAGTCTGGCCCCCT 1036
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1037 TGTCTTTAATAGGGCCCATTGTCTGGAGAATTATAAACTTTGAGCAAGAAAGATTCTTTCAGGTCATTTAGGCC 1110
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1111 AGCCCTGTGCACACAGCGGCCTGCAGGGACATGCTGAACCCCTTCTGCCATTACCTGCTTTTCCTTTGTACCAT 1184
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1185 CTGAGCCCCACAAAGCTAAGCGGCCACAGAGAACAATGATGCAAAATCAGTGGGACTTAATCCTTTTGGCTCTG 1258
Query 856 -------------------------------------------------------------------------- 855
Sbjct 1259 TGGGGCCTGTCTGTTGTCTCTTCCCTCTTCCTGCCCTTCTCTCTCCTTCCCACTTCCCAGATCTCAAGGGATCA 1332
Query 856 -------------------------------------------------------GAGATCTCACGCCACCTGG 874
|||||||||||||||||||
Sbjct 1333 GGCAAAAAGGGGACAGCAGCAACCAACTGCATCAGCCTCCTAGAGCAGGAAAAAAGAGATCTCACGCCACCTGG 1406
Query 875 GCAAGATGTATAGTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTG 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCAAGATGTATAGTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTG 1480
Query 949 CGGAAGCACCCCGGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAAGA 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGGAAGCACCCCGGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAAGA 1554
Query 1023 ATTCCGCCTGAATTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAGCC 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATTCCGCCTGAATTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAGCC 1628
Query 1097 AGCGACTGGGAGCCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCAAC 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGCGACTGGGAGCCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCAAC 1702
Query 1171 AGAGGCATCAGCCAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCC 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGAGGCATCAGCCAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCC 1776
Query 1245 CCAGATCAGCCATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTG 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCAGATCAGCCATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTG 1850
Query 1319 GCATTGAGGCCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCG 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCATTGAGGCCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCG 1924
Query 1393 CTAGCTGAGCACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTCAA 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTAGCTGAGCACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTCAA 1998
Query 1467 CTTATGGCAGATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGCCC 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTTATGGCAGATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGCCC 2072
Query 1541 TAATATGCTGGCTGTTCCCTGCTCCACTC--------------------------------------------- 1569
|||||||||||||||||||||||||||||
Sbjct 2073 TAATATGCTGGCTGTTCCCTGCTCCACTCTGAGTGGAATTGCTCTCCCTGCCCCATTCTGGTGTCTTTCCACTC 2146
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2147 CTCAGCCCCTCATCTTGCCTCCACCCAGCTGCTCCATTTTTGCCACATCGTGGCCCGCAGCCCCAGAGTCACTG 2220
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2221 TCCATGTCACCATCCTTCTCCTCCTTTGGAATCCTCTCCGCACACTGTGGCCCTTGTCTCAGGGCCCACAAGCT 2294
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2295 GAACTGTGGCATAGCTCTCTCTTCTTCTCCAAGAAGACTCAGCAGCCTACATTCCCATTCCTGGTATGTGCCAT 2368
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2369 TGGGTTGGATGTCCCCACTACTTCCGTTAACCCTTCCCATTGTCAAGATGTGCCACGGGTGCCACTGGGGGCAC 2442
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2443 ACTGAACTTGTAGGGAGTGTGATTTTGTTGGAGGTGCACATGGTCTCTGAATTTGACAGAGAACACCTTCCCTT 2516
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2517 TCCTTGCCATGTCACCCTCCAGAGGAAGTCACACCTCAGCGAGGTGGTTTGGCATCTGGGGCCAACTCCATTAC 2590
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2591 AGCTATGAGCTCACTGCTGTCAGTGACGTTTGGTGTTTTCTGTACTGTGTTTCAATAAAAACTCCTTCAAGGTT 2664
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2665 GCAGGATTTGTCCATCATAACTCACTGGCCTCCCACCTGACCCCAGGCACGTGCCCTTCCAGAATGTGCTCATG 2738
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2739 GTCCTCGCCAAGGGCTTATGGTTCCTCTTGGTTGCTGCTTCCTCAGGGTTTCCCAGGGAGATCTAGGGAACAGA 2812
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2813 AGGCCAGGGGCTGTTTGGTGGGATTTTCCTTATAGGTTGGGAGTTCACCTACAATGCCCATTAGGTCAGAGTGG 2886
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2887 ACCTGAATCGAGTATTGGTGTGATCTTCTGCTTGGCTTCTTGCTCCTGTAATCCTTCCAACCTGTGGGGCCACT 2960
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 2961 TCCACTATGGGGCCACTTCCTGCTTCTTGGGGGTTTCTCTTACCTTCCAAGACTCAGACTCTGGTTGGAGGAGT 3034
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3035 TAAGAAGCCCAAGGCCAGGAACTCAGAGGCTCAGCTGAAACCTTGGACCTTGTTTTTCTGTGACCTGGGTACCA 3108
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3109 ACCTTGTTCTACTGTTTCCTGACTTATCCCTTTGGTTCTCATTCAGTGGCCCCAGTTTTAGGCCTGGAATTCTA 3182
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3183 CTTGTCTCCCCCCAGTCCTTCTGGAGACCTTAGTCCTCTTGCTGAAACCTCCGTCACTGTGGCTGGGTTTTCAC 3256
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3257 TGGGAAACTTCTGTGTTTCTACCCCATTGCTTGCTGCCAGCACTGCCTCTCCCCCCAGCCTGGTTGTCTGCTTC 3330
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3331 TGTTTCTTGGACATCCCTAAGCTCCTGCTCTAATTCCCATGTCTTTGTCTTTGGCAGGTCCTACTGTCTGCTTT 3404
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3405 CACGGACAGTAATTGTATTTGAGCCTCTCTGATCTTACTTCACCCAATTCACAAGGGCAGAAAAAATCCTGAAT 3478
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3479 TTGAGCCTAATTTTCTGTACTCTTTATTCATAGTACAGCAAGCAGATTTTTCAGTGATCAGTGACAATTCACAA 3552
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3553 TCCTTTTATTTCCCAAAAGAATTAATTGTTCTTAGTGACCAGTTGGATGCACCCAGGGACCTGAGAGTATAATT 3626
Query 1570 -------------------------------------------------------------------------- 1569
Sbjct 3627 TGCAATATCTGATTATTAATCTTGAGGATGTGTGCTGCATAGTATATTTTATGGTGTCTTTTATAGCCACTGAA 3700
Query 1570 --------------------------- 1569
Sbjct 3701 GTAAATATAAATGTCCTTTCTGTTCAA 3727
