Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15207
- Subject:
- NM_001012753.2
- Aligned Length:
- 1471
- Identities:
- 710
- Gaps:
- 662
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGTTTCAGGACCCTGTGGCCTGTGAGGATGTTGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTTCGCAGAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTATAGGGAAAAAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGGGAATGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGAAATTAAAGAAGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGAAAGCTTCTCCTGAAGCAAAATCATGTGATAACTTTGTATGTGGAGAAGTTGGCATAGGTAACTCATCTT 370
Query 1 -----ATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAG 69
|||||||||||||||||||.|||.||||||||||..||.|.||||||.||||.|||||||||||..|||
Sbjct 371 TTAATATGAACATCAGAGGTGACATTGGGCACAAGGCATACGAGTATCAGGACTATGCACCAAAGCCATATAAG 444
Query 70 AGTCAACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAA 143
.|||||||||||||.||||||||||||||||||||||||||.|||||||||||||||.|||||||.|||.||||
Sbjct 445 TGTCAACAACCTAAGAAAGCCTTCAGATATCACCCCTCCTTTAGAACACAAGAAAGGAATCACACCGGAGAGAA 518
Query 144 ACCCTATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACA 217
|||||||||||||||||||||||||||||.|.||||||.|||||||.||||||.|||||.|||||||.||||||
Sbjct 519 ACCCTATGCTTGTAAAGAATGTGGAAAAACCTTTATTTCCCATTCAGGCATTCGAAGACGCATGGTAATGCACA 592
Query 218 GTGGGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAA 291
||||||||||||||||||||||||||||||||||||||||..|||||||||||||.||||||||||||||||||
Sbjct 593 GTGGGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCTGTCCATTGTCTCAGATTATATCTTATCCATGAA 666
Query 292 AGAACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCG 365
|||||||||||||||||||||||||||||||||||||||||||.||||||.|||||||||||||||||||||||
Sbjct 667 AGAACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGTTAAATCCTTTAGTTATTCTGCTACCCATCG 740
Query 366 AATACATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCA 439
||||||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||||||||.|||
Sbjct 741 AATACATGAAAGAACTCACACTGGAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTCCATAGTTCCA 814
Query 440 GATCCTGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTC 513
|.||.|.|| ||||
Sbjct 815 GTTCTTTTC---------------------------------------------------------AAGC---- 827
Query 514 ATGTGTCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGG 587
||||.||||.||||||.||.||..|||.|..|||||||||||.||.|||||
Sbjct 828 -----------------------ACATAAAAGAACCCACACTGGGGGAAAGCCATATGAATGTAAACAATGTGG 878
Query 588 GAAAGCATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTA 661
.|| ||||| || ||| ||| |||
Sbjct 879 CAA------ATCCT-TC-----AGT--------------------------TGG----------------TGT- 897
Query 662 AGACATGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCG 735
||| ||.|||||||.||||||||.||||||||.|||.|||||.||.
Sbjct 898 ---CAT--------------------------TCCTTTCAAATACATGAAAGAACTCACACTGGGGAGAAGCCC 942
Query 736 TATAAATGCAAGC-AATGTGGTAAAGCCTTCACTCGTTCCGGTTCCT---TTCGATATCATGAAAGGACTCACA 805
|.|.|||| .||| |||||..||||||.|||..|.|||.|.|.|||| ||.|| |||.||||||.|||||
Sbjct 943 TGTGAATG-TAGCAAATGTAATAAAGCATTCCGTAGTTACAGATCCTATCTTAGA---CATAAAAGGAGTCACA 1012
Query 806 CTGGAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATCGCATGGT 879
|.||||||||.||.|||.|.||||||.|||||.|.|||||.||||
Sbjct 1013 CGGGAGAGAAGCCTTATCAATGTAAGGAATGTAGAAAAGCATTCA----------------------------- 1057
Query 880 AGGACTCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTGCCTCACAACTTCG 953
|||||| .|||.|| .|||||
Sbjct 1058 ----------------------CGTATC------------------------CCAGTTC---------CCTTCG 1076
Query 954 AATCCATCGTAGGATTCACACTG-GAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCT--TCAGATATG 1024
.|..|||...||||..|||.||| || |.|||||.||||||||||||.|.|||||||||||.| ||..|||.|
Sbjct 1077 TAGACATGAAAGGACCCACTCTGCGA-AAAAACCTTATGAATGTAAGCAGTGTGGGAAAGCATTATCTTATAAG 1149
Query 1025 TCCAGAACTTTCGATTTCATGAAAGGACAAACACACATAAGAATGCACTCTGGAGAAAGACCTTA 1089
| ||| |||||||||.|||||||||.||||||||||||||||||
Sbjct 1150 T-------TTT----------------CAAACACACCTAAGAATGCGCTCTGGAGAAAGACCTTA 1191
