Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15267
- Subject:
- NR_048566.2
- Aligned Length:
- 3175
- Identities:
- 327
- Gaps:
- 2848
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGTTCCTTTCTGTATTGTGCTGAGAGGATCCAAGGGATTGGTGGGGGAACAGGCAAGCCAGGCATCACCGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATGTTGAAGAAGGGGGTTACTCAAACCTCGGCATCTTCACTTGCTCGATCTGGAATTACAGCTATTTATTACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCACTCTGTGTGGCTTAGTGGAGTGTGTCTGAGGAAACACATCCCGGACACCACTTAGGGTTAGTCTTTCTG 222
Query 1 ------------------------------------ATGGAGCCCAACAGTCCCAAAAAGATACAGTTTGCCGT 38
||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGCTCTTCACATCTCTGACTAATTATCATCATTACCATGGAGCCCAACAGTCCCAAAAAGATACAGTTTGCCGT 296
Query 39 GCCTGTATTCCAGAGTCAGATTGCACCTGAAGCAGCAGAGCAGATCAGGAAAAGAAGACCTACACCAGCATCAC 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCCTGTATTCCAGAGTCAGATTGCACCTGAAGCAGCAGAGCAGATCAGGAAAAGAAGACCTACACCAGCATCAC 370
Query 113 TTGTGATTCTCAATGAGCATAACCCCCCAGAAATAGATGACAAGAGGGGGCCCAGACACACAAGGGGAATGTAC 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 371 TTGTGATTCTCAATGAGCATAACCCCCCAGAAATAGATGACAAGAGGGGGCCCA-ACACACAAGGGGAAT-TAC 442
Query 187 AGAATGCATCCCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCCACCATAAAAGGGGTTAAGCATCTGAAA 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 AGAATGCATCCCCTAAGCAAAGGAAGCAGAGTGTGTACACACCACCCACCATAAAAGGGGTTAAGCATCTGAAA 516
Query 261 GGCCAGAATGAATCAGCATTCCCTGAAGAAGAAGAAGGCACCAATGAAAGAGAGGAGCAGCGGGACCAT----- 329
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 GGCCAGAATGAATCAGCATTCCCTGAAGAAGAAGAAGGCACCAATGAAAGAGAGGAGCAGCGGGACCATTAATT 590
Query 330 -------------------------------------------------------------------------- 329
Sbjct 591 ACTGGTCTGCAGCAAGAAGGCTTCTTGGAAATAACTGAACTATTAACTTTTCTGAGTATACCATGGAATTCCAC 664
Query 330 -------------------------------------------------------------------------- 329
Sbjct 665 TGCTTGACTTCCAGAAGCATCCTCCATCTCTGCACCCCACACTCATACAGTAGCTATGCACATCCTGGAAGTCT 738
Query 330 -------------------------------------------------------------------------- 329
Sbjct 739 CCTTGACTGAACTTTAGAACTAAGTGCAAAATGAGTTGATAACAACCAGAAGTTGACTTGTTAGTGCTGTGCTT 812
Query 330 -------------------------------------------------------------------------- 329
Sbjct 813 CTACTCGAGCTTGGAAAAATCCCAACACAAAACAAACACCACCTCCGATTCCATCATGATGCCACGTTGCTTTC 886
Query 330 -------------------------------------------------------------------------- 329
Sbjct 887 TACTGGATTACCTCCTGAAGCACTTTAGATATTTTATACATAAGTATTGACATGTTTTTCAGAAGCTGTTTCTT 960
Query 330 -------------------------------------------------------------------------- 329
Sbjct 961 CACTTATTGCTTTTTTCTAATAATTTTTATTACACCATTTGCCAAGTCCTTCCCTTTGGTTTTAGTTTATTCCT 1034
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1035 CTCTACAACTAAAAAAGGGATCTTGAGTTTAGGTACATTTTAAGTGATTCATTTTTAGTTTTTCTAATTCTGGA 1108
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1109 ATCTGAGCCTTCTCTTACAACAGGGAGTCTTTCAAAAACATTTTTTTGTTTCTTTTTCAAATTCCACTGTGTTT 1182
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1183 ATTTATTGCCTTGTTTCTTTTTCAAATTCCATTGGTCTTGATTTAATTTAGTTCCACAGATTTTACTGATAGTC 1256
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1257 TACTACCTGCCAACTACTGAATTATGCAGCAGACTTATAAAAATAAAAAGGCTATTTTATTGTTATTGCCATCC 1330
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1331 TGCTAGTAAAGATTTATTCAATTATTTATAATTAATTAAGTGGCTTCACCTATATTTCTGTTAATAATCACATT 1404
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1405 AATTATGTATGACAGGTAGGATTTATGTTATAGATAAGAAAACTAGAGTCCAAAGAAAATAAGTGTCCCCAAAT 1478
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1479 GAACCAATAATCCAACAAACGCTTCCACTAACTAGCTTCTGACCTGTTTGAGTTGTGATAGATTTTAGAATAAA 1552
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1553 AAAGCCTATCCTCCTTAGGAGCCATAGACTTTTATTCTTTCTTATACTGTCTTATATATTGACTTAGAGCTAAA 1626
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1627 CTTCCTCCAATTCAGACATAAAGCATAGGCAGATACTTTTGCTAATGAGGCTAAGCTGGGAAGAAAACCCTGAG 1700
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1701 TTCTACTTTAATTCTTGGGCATTGACTTCAAACTAAGATGACTTATAAGAAATAAAAGAAGTAAATTTGAAACT 1774
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1775 TTAATAAAAAAAGTACATGGTTCATTTAAAAATGTTTCCTATGTCTAAATCTATATTTTAAAAATAACCTTTAT 1848
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1849 CATGTAAAATGAGAGAATTGCTGAGTTTATGACAATCTTAGGTATAACCTTTTCTTAAAGAACAAGGCATCAAT 1922
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1923 CTTTAATTTGTTTCCCTTTCTTGATTTCTCATAAGTTGCAAAATAAAAATAAAAATAATTTCACAAATTGTTCA 1996
Query 330 -------------------------------------------------------------------------- 329
Sbjct 1997 TTATTATTATCCTCCCTACTTGCCCCAGGATTTAAGTACTAACTTTTACTTCCTACTCTTAGACTTTGTATTGC 2070
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2071 CAAAGAAATAAAATATGAAAAAGCATAATCACCCAGACCTACCTGCGGAATTGTGGATTATGCTGTAGATATTA 2144
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2145 GATCATTGAAAGGAACAATATACTACTTAATGAGGAGCCAAAGACAACATTCTACCTGCTGCTCCCTTCAAGCT 2218
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2219 GAGGAATGAGTTTAATTGACTTCAAAGTCCCATTATTCTCAAAAGTAGCAAAGGTACAACATGGCTTTGCATGA 2292
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2293 ATCAAAGGAAGGGAACAACAAGAACTTAAAAAAATAGTTTGCAGATGGTTGAACATCTCTTTAATAATTAGAGA 2366
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2367 AGAATATCTTTTCTTTCTTTATTGTTTACAGATACCAACATTTTTCAAAGCCTTGCAGTAGATGAGTGAGTCTC 2440
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2441 CTGTTACATTTCTCCTGCAGCATATATTCTGTGGATGTGTTTTCCTAAGCAGACTAATTATATGTTGCTCTCTT 2514
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2515 CTTTTACCCTAATGAAACATAGATTTTTCTGTTTTGAATTTGTCACTTGTTTGTTACATTTGTCAAGTGTTTTA 2588
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2589 AATATTACATTGGTCCTTTATTTGCTTTTGAGAACACCCAATAGTTTAAAAATTAAAATGACATGAAGGTCAAT 2662
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2663 TCTAAGACAGGAATGATACTACTAAATCCTGGACTTGCCTATGATAACAAGCTCGAGCTACACACTTTTATTGT 2736
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2737 CAGAATAAATGGAATATATAGGAAGGAGTTAATTGGAACTGGTTAGTACCTAAATAAGATTTTTCAAAGTAAGT 2810
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2811 TTTTTGTCGTATTGGCAGAACAGTGTTAAAAAATAGACATTGTCATCATAAACACCCACAACTATATCTGTAGA 2884
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2885 AGATAATTTAATGCAATATTCTGGGGAAAATACAGTTGCCAAAATTAATCTCCTTGTTTTCTTTCATTGTGCAA 2958
Query 330 -------------------------------------------------------------------------- 329
Sbjct 2959 TGTGGAGTTAAATTTTTTTTCTATTGAGCAGTGTGTGTGTGTGTTTGTGTCTATAATTTATATATGTGCTTGTA 3032
Query 330 -------------------------------------------------------------------------- 329
Sbjct 3033 TACATTTCTATATACACATGTATGTGTATGCAAAATATGTATATATACACATATATATAAAATGTACACTAAAT 3106
Query 330 ------------------------------------------------------------------- 329
Sbjct 3107 ATGTATATATGTATATTCATAAAATGTTTTGCTGTATGGAAATAAAAAAGAAGGTTTCTAAAGGAAA 3173
