Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15308
- Subject:
- XM_017003984.1
- Aligned Length:
- 976
- Identities:
- 520
- Gaps:
- 440
Alignment
Query 1 ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAAC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAAC 74
Query 75 CTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAA 148
Query 149 GAGAAATACGTATGTTGAAGCAAATTAAAACAATNCCAAATCTTGTGAACCTCATCGAAGGTGTTCAGGAGAAA 222
||||||||||||||||||||| |||||||||| .|||||||||||||||||||||| ||||||||||||| ||
Sbjct 149 GAGAAATACGTATGTTGAAGC-AATTAAAACA--TCCAAATCTTGTGAACCTCATCG-AGGTGTTCAGGAG-AA 217
Query 223 AAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 218 AAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGA 291
Query 297 GTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 GTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTG 365
Query 371 TATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 TATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGT 439
Query 445 TTGCACAAATTCTGA-TTCCAGGA--------------GATGCCTACACC--GATTATGTAGC-TACGAGATGG 500
||||||||||||||| || ||| |.||||| || ||| |.|| ||..||.|
Sbjct 440 TTGCACAAATTCTGAGTT---GGACTTCATCTTTCTCTGGTGCCT---CCTTGAT----TGGCTTAATAGTT-- 501
Query 501 TACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGT 574
||.||.||||| ||||| .|||| |.|.|||
Sbjct 502 ----GACCTTCTGAA-TTCTT-------------------TTTCT--------------GCCAATT-------- 529
Query 575 TTTTGCAGAG------CTCCTGAC-AGGCCAGCCACTGTGGCCTGGAAAATCAGATGTGGACCAACTTTATCTG 641
||||| ||||||.| .|| |.|||.||.
Sbjct 530 -----CAGAGATTTTTCTCCTGGCTTGG--ATCCATTGC----------------------------------- 561
Query 642 ATAATCAGAACACTAGGAAAATTAATCCCAAGACATCAATCAATCTTTAAAAGTAACGGGTTTTTCCATGGCAT 715
Sbjct 562 -------------------------------------------------------------------------- 561
Query 716 CAGTATACCTGAGCCAGAAGACATGGAAACTCTTGAGGAAAAGTTCTCAGATGTTCATCCTGTGGCTTCTGAAC 789
Sbjct 562 -------------------------------------------------------------------------- 561
Query 790 TTCATGAANGGNTGTCTGAAGATGAATCCAGATGACAGATTAACCTGTTCCCAACTCCTGGAGAGCTCCTACTT 863
Sbjct 562 -------------------------------------------------------------------------- 561
Query 864 TGATTCTTTTCAAGAGGCCCAAATTAAAAGAAAAGCACGTAATGAAGGAAGAAACAGAAGACGCCAACAGGTAC 937
Sbjct 562 -------------------------------------------------------------------------- 561
Query 938 TTCCGCTCAAAAGT 951
Sbjct 562 -------------- 561