Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15370
- Subject:
- NR_104597.1
- Aligned Length:
- 2843
- Identities:
- 430
- Gaps:
- 2412
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCCGCGCCGCGCAGGCGCACTGAGCCTCAGCCGCTCTCCTCGCTACCAGGCTCCTTTCCTCTATCGCGCAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCACTGAACCTCAGCCGCGCCGGGAGGCGAGCCCGTTGGCGAGGGGCGGGGCAGATGGCGAGGGAGCGGGGCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTGCTTTTTGAGGCTGCGCACTCGCATGGCCCCACCTCGCAGGTCCACTTCCGGCGCCGCGGCTGTTCCGGGC 222
Query 1 -----------------------------------------------------------------ATGGCGCCC 9
|||||||||
Sbjct 223 GGAGACCGCTTGTGCTGGAGTCGGAGTTGTAACGCTCCACTGACTGATAGAGCGACCGGCCGACCATGGCGCCC 296
Query 10 GGAGTGGCCCGCGGGCCGACGCCGTACTGGAGGTTGCGCCTCGGTGGCGCCGCGCTGCTCCTGCTGCTCATCCC 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGTGGCCCGCGGGCCGACGCCGTACTGGAGGTTGCGCCTCGGTGGCGCCGCGCTGCTCCTGCTGCTCATCCC 370
Query 84 AGTGGCCGCCGCGCAGGAGCCTCCCGGAGCTGCTTGTTCTCAGAACACAAACAAAACCTGTGAAGAGTGCCTGA 157
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGTGGCCGCCGCGCAGGAGCCTCCCGGAGCTGCTTGTTCTCAGAACACAAACAAAACCTGTGAAGAGTGCCTGA 444
Query 158 AGAACGTCTCCTGTCTTTGGTGCAACACTAACAAGGCTTGTCTGGACTACCCAGTTACAAGCGTCTTGCCACCG 231
|||||||||||
Sbjct 445 AGAACGTCTCC--------------------------------------------------------------- 455
Query 232 GCTTCCCTTTGTAAATTGAGCTCTGCACGCTGGGGAGTTTGTTGGGTGAACTTTGAGGCGCTGATCATCACCAT 305
||||||||||||||||||||||||||||
Sbjct 456 ----------------------------------------------TGAACTTTGAGGCGCTGATCATCACCAT 483
Query 306 GTCGGTAGTCGGGGGAACCCTCCTCCTGGGCATTGCCATCTGCTGCTGCTGCTGCTGCAGGAGGAAGAGGAGCC 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 GTCGGTAGTCGGGGGAACCCTCCTCCTGGGCATTGCCATCTGCTGCTGCTGCTGCTGCAGGAGGAAGAGGAGCC 557
Query 380 GGAAGCCGGACAGGAGTGAGGAGAAGGCCATGCGTGAGCGGGAGGAGAGGCGGATACGGCAGGAGGAACGGAGA 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 GGAAGCCGGACAGGAGTGAGGAGAAGGCCATGCGTGAGCGGGAGGAGAGGCGGATACGGCAGGAGGAACGGAGA 631
Query 454 GCAGAGATGAAGACAAGACATGATGAAATCAGAAAAAAATATGGCCTGTTTAAAGAAGAAAACCCGTATGCTAG 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 632 GCAGAGATGAAGACAAGACATGATGAAATCAGAAAAAAATATGGCCTGTTTAAAGAAGAAAACCCGTATGCTAG 705
Query 528 ATTTGAAAACAAC------------------------------------------------------------- 540
|||||||||||||
Sbjct 706 ATTTGAAAACAACTAAAGCGCTCCAGCACATCAGTCCCGACGCTTCCTGTGAGGTGCACGCTCCGCAGCCCAGC 779
Query 541 -------------------------------------------------------------------------- 540
Sbjct 780 CCAGCCGGGAGACCACGTGGCCATTGCGGTCTCCTGACCTTGGCCAGTGAACCTGCCAGCCTTCCAGGACAGGC 853
Query 541 -------------------------------------------------------------------------- 540
Sbjct 854 GGCCGGAGAGCTGCCCCTGAAGGACAGTCCTCTCGTCTTGCAGACTGGTGACCTTCTATTCCCTGTTCATCTCT 927
Query 541 -------------------------------------------------------------------------- 540
Sbjct 928 GTTTCTAGATTTAGTCACTTGAAATAAGAAATCTTTGGGGTTTGGGCTTTTTTATACTCTTCTCAGTTTGTGAA 1001
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1002 ACGCTAACTGCACACGAAGCCGCCTGACGGCACCCAGCGCTGTGGCTGTCATTCTCCCAGGGCAGAACCCTGCG 1075
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1076 TTTCTCTCTGTCCACTAACAAGCTTCACACGCAACACAGGGAAGTCGGTTTGACTTTTGTCATGAGGAGAACTG 1149
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1150 ACCAGCCCTCATCATTCCCCATAAAACCACGGACAGCGTCTGTGTGCGCATCTTGAGTCTTCACACCTGTTGAC 1223
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1224 TCACACGGCTTTTGCTGATGACACGGGGCTCCAGTACACAGTCTGATAAGGACTTAACGTCCTAACCTCAATTG 1297
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1298 TATTAAATAGCATTGGGGAATAGCTAAACCTTTTTAAAAAAATTTATTGGATTTTCCTCCCTGCTTAAAAGATT 1371
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1372 TCACCAGAAAACCTTCATATAAAAATTCAGGCCCTTTTTGGACAATTTTTAAAATTTGTATCTTTACTAGAACA 1445
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1446 TGAGAATCTTTTTCCCTTGGAAGCTTGAATTATAAATGTGGTGTTTGGCCTGCCTCAGCAGCACCAGTTGACTG 1519
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1520 CTCGTGTGCCAGCGGTGTGGGGAGGACGGGGCAGGACGCTGCAGCTCTCTCCAGCCCTGTTGGCATCCTCAGTG 1593
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1594 CCTGCAGGCCTCTCGCTGCCTGTTGGGCTGTCTGGGGGGTGGCCATTTAGGGATCGTGGGGACGGGGTCCACCC 1667
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1668 CAAGAAGAAAGAAAGGCCCGTCCACAGGCCCGGCTCTGGGCCACGTGCCCCGGAAGCAGGTGTGTCCAGAGTCA 1741
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1742 GCTGAGGGCTCTCCCCACACCACCCAGCAGGCGCTGGTGCTCCTTCTGCCTCATGGGACCAGTCCAGCTTCCAG 1815
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1816 CCGCTCTGGCTCGAGGGTGGTCTGACCACTTCCTTCTGAGTGGGCTTCTCTGGGAGCTCTCCAGTGGCACTGCT 1889
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1890 GGACCTGCCCACGTTTCTGTAAAATCAGGATACGTGGCTTTAGTAAGCAGACCAAGCGCTTCGTGGCAGGGAAA 1963
Query 541 -------------------------------------------------------------------------- 540
Sbjct 1964 GCAGCGTGCGGGGAAGTCACTGAAAAGTGCTGCCTAAGGAAGTTTGGAAATAGTCCCTGTTCCAGATTGCCTTG 2037
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2038 AATTTTAAAACATTTTGCTTTGGGAAAGTAGGTCAGCAGCACCTAAGATCAAGGATGCGTTCCATTTTCACACT 2111
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2112 TCACAGTCATGAAAACTGAGAAGACTGTCTTCAGCGTGAACTAAAGTTCACAGGCAGATCACTGATCCAGAACA 2185
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2186 CTTCAAGAACTCGTCAAACAGCTCGATAAGCCTTTTTGACTGTGTACATCTGTACCGGGAATAACATTCCTAGG 2259
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2260 CTGAAATTTCCACAAAGAATAGAACCTGTACCCAGTTCTTCAGGCTGATTTCCCTGACCTCTTGGGCATTTGTA 2333
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2334 TTTGTAGTAAAGTATTGCAGAGATTCCTAAGTATTTTATAGCAGCCATCAAAATTGGACTTTGTATTGTTTATT 2407
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2408 CATAAAAGACACTTGGTAATAGACTTCAGTGAACTCTGTATGAATGCAGTAGTGTGTGTGCAAAATCCGCTTCC 2481
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2482 TGAGCGTAGGGTGCTGAGCTGGCGCTAGGGCTCGGTTGTGAAATACAGCGTAGTCAGCCCTTGCGCTCAGTGTA 2555
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2556 GAAACCCACGTCTGTAAGGTCGGTCTTCGTCCATCTGCTTTTTTCTGAAATACACTAAGAGCAGCCACAAAACT 2629
Query 541 -------------------------------------------------------------------------- 540
Sbjct 2630 GTAACCTCAAGGAAACCATAAAGCTTGGAGTGCCTTAATTTTTAACCAGTTTCCAATAAAACGGTTTACTACCT 2703
Query 541 ------------------------------- 540
Sbjct 2704 GCGTGTGTTTAGTAAAAAAAAAAAAAAAAAA 2734
