Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15398
- Subject:
- XM_017318488.1
- Aligned Length:
- 1550
- Identities:
- 805
- Gaps:
- 640
Alignment
Query 1 ATGGCGGATGCGGAAGTAATTATTTTGCCAAAGAAACATAAGAAGAAAAAGGAGCGGAAGTCATTGCCAGAAGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGATGTAGCCGAAATACAACACGCTGAAGAATTTCTTATCAAACCTGAATCCAAAGTTGCTAAGTTGGACACGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTCAGTGGCCCCTTTTGCTAAAGAATTTTGATAAGCTGAATGTAAGGACAACACACTATACACCTCTTGCATGT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGTTCAAATCCTCTGAAGAGAGAGATTGGGGACTATATCAGGACAGGTTTCATTAATCTTGACAAGCCCTCTAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCCCTCTTCCCATGAGGTGGTAGCCTGGATTCGACGGATACTTCGGGTGGAGAAGACAGGGCACAGTGGTACTC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGGATCCCAAGGTGACTGGTTGTTTAATCGTGTGCATAGAACGAGCCACTCGCTTGGTGAAGTCACAACAGAGT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GCAGGCAAAGAGTATGTGGGGATTGTCCGGCTGCACAATGCTATTGAAGGGGGGACCCAGCTTTCTAGGGCCCT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGAAACTCTGACAGGTGCCTTATTCCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTCCGAGTGAGGA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CCATCTACGAGAGCAAAATGATTGAATACGATCCTGAAAGAAGATTAGGAATCTTTTGGGTGAGTTGTGAGGCT 666
|||||.|||||.||||||||.|||||||||||||||||||||||.||.|||||.|||
Sbjct 1 -----------------ATGATAGAATATGATCCTGAGAGAAGATTAGGAATCTTTTGGGTAAGCTGTGAAGCT 57
Query 667 GGCACCTACATTCGGACATTATGTGTGCACCTTGGTTTGTTATTGGGAGTTGGTGGTCAGATGCAGGAGCTTCG 740
||||||||||||||||||.||||.||.||||||||.||||||.|||||||||||||||||||||||||.|||||
Sbjct 58 GGCACCTACATTCGGACACTATGCGTACACCTTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCG 131
Query 741 GAGGGTTCGTTCTGGAGTCATGAGTGAAAAGGACCACATGGTGACAATGCATGATGTGCTTGATGCTCAGTGGC 814
||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct 132 GAGGGTGCGTTCTGGAGTCATGAGTGAAAAGGACCACATGGTGACAATGCATGATGTACTCGATGCTCAGTGGC 205
Query 815 TGTATGATAACCACAAGGATGAGAGTTACCTGCGGCGATTTGTTTACCCTTTGGAAAAGCTGTTGACATCTCAT 888
|||||||||||||.|||||||||||||||.|||||||..|||||||||||||||||||||||||||||||||||
Sbjct 206 TGTATGATAACCATAAGGATGAGAGTTACTTGCGGCGTGTTGTTTACCCTTTGGAAAAGCTGTTGACATCTCAT 279
Query 889 AAACGGCTGGTTATGAAAGACAGTGCAGTAAATGCCATCTGCTATGGGGCCAAGATTATGCTTCCAGGTGTTCT 962
|||||.||||||||||||||.||||||||.|||||.||||||||||||||||||||.||||||||.|||.||||
Sbjct 280 AAACGTCTGGTTATGAAAGATAGTGCAGTGAATGCAATCTGCTATGGGGCCAAGATCATGCTTCCTGGTCTTCT 353
Query 963 TCGATATGAGGACGGCATTGAGGTCAATCAGGAGATTGTGGTTATCACCACCAAAGGAGAAGCAATCTGCATGG 1036
|||||||||.||.||||||||||||||.||||||||||||||.||.||.||.||.||.|||||.||||||||||
Sbjct 354 TCGATATGAAGATGGCATTGAGGTCAACCAGGAGATTGTGGTCATTACTACTAAGGGGGAAGCTATCTGCATGG 427
Query 1037 CTATTGCATTAATGACCACAGCGGTCATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAGTGATC 1110
|.||||||||.|||||.|||||.||.||.||||||||.||||||||||||||||||||.||.|||||.||||||
Sbjct 428 CAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCATGGTATAGTAGCCAAAATAAAGAGGGTGATC 501
Query 1111 ATGGAGAGAGACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGCTGATGATCAAGCA 1184
|||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 502 ATGGAGAGAGACACTTATCCTCGCAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGATGATGATCAAGCA 575
Query 1185 GGGCCTTCTGGACAAGCATGGGAAGCCCACAGACAGCACACCTGCCACCTGGAAGCAGGAGTATGTTGACTACA 1258
|||||||||||||||||||||.||.||||||||||..||.||||||||.|||||.|||||.||..|||||||.|
Sbjct 576 GGGCCTTCTGGACAAGCATGGCAAACCCACAGACAATACCCCTGCCACATGGAAACAGGATTACATTGACTATA 649
Query 1259 GTGAGTCTGCCAA-AAAAGAGGTGGTTGCTGAAGTGGTAAAAGCCCCGCAGGTAGTTGCCGAAGCAG------- 1324
||||.||||.||| ||.|.| .|||||.|.||||..|||.|||||||.|||.|||.|||.|||||||
Sbjct 650 GTGATTCTGGCAAGAACACA-CTGGTTACCGAAGCAGTACAAGCCCCTCAGTTAGCTGCTGAAGCAGTAAATGT 722
Query 1325 CAAAAACTGCGAAGCGGAAGCGAGAGAGTGAGAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGATC 1398
||.||| || |||||||.||.|||||||||||||||||.|||| |.|||.|||.|||.|||||
Sbjct 723 CATAAA-----AA--GGAAGCGGGATAGTGAGAGTGAAAGTGATGAGA---CCCCAACAGTTCCCCAGTT---- 782
Query 1399 AAGAAGGAAAAGAAGAAGAGTAAGAAGGACAAGAAGGCCAAAGCTGGTCTGGAGAGCGGGGCCGAGCCTGGAGA 1472
|||||||||||||||| ||||||||.||||||.|||||.|||..||.||.||.||||.|||..|||||||
Sbjct 783 --GAAGGAAAAGAAGAAG---AAGAAGGATAAGAAGCCCAAAACTGTGCTAGAAAGTGGGGGCGAAACTGGAGA 851
Query 1473 TGGGGACAGTGATACCACCAAGAAGAAGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGGTTTCTGAG 1542
||||||||..||.|||||| ||.|||||.|||||||||||||.|||||.|||||||..|.|.|||||.
Sbjct 852 TGGGGACAACGACACCACC---AAAAAGAAAAAGAAGAAGAAAGTAAAAGTGGTAGAAGAGATGTCTGAA 918