Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_135913.2
- Aligned Length:
- 4048
- Identities:
- 160
- Gaps:
- 3865
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGAGTAAGCCCCCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCACCTTCCGTCCTCGATCGTTCCCCTTGTGGAAGTAGTCCCGGGTCTCGTGGGATCCTCGCCGCCCGCTCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCGCTGTCGGTTCCCCCGCGCCTGGGCGGACCCTAACCCCACCCGGCCCTCCGCACCGCAGCCCCGGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CACCAGGTCCTCTGCAGACTGGCCGGACAGCCTGGCCTTTTCCAGCTCAGGTTCCTAATCTGTAAAATGGGCGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCGTGGGAAGGGGAGGAAGAGGCAGAAAGGCACTGGACTCCAGGAAAGGGGTCGGGGAACGTGCAGGGGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCGCCAGACACACCACGTTCCGGCCAAGTGGCTCCTTACTGGCTGTGAACGTGGGCCAGTCACTGTCTCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGCAATCTTCGGACTCATTCCGGAAGGCAGTGTAGCCTAATGGTGGAGGGTTCCGACTCTGGAGCCAGGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGTCCTCCCTCTTCCTGTGACTTTGAGCGAGTGACTTCACCCCTTGGGCCTCAGCTTCTTCATCTCCAAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATGGCAATCATACTACTGTTTTAGACACAGTAAGTGTTATAAACGTGTTTTTGTTTGTTTGTTTGAGACAAGA 666
Query 1 -------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCA 49
.|||||.|||||.|||||.||.|||||||.|||||..|||||.||||||
Sbjct 667 GTTTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCGATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCA 740
Query 50 AGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAA--CTAATTTTT 121
|||.||||||.||||||.|||.|||||||||||||||||||| |||||..|||| |||.|.| |||||||||
Sbjct 741 AGCAATTCTCCTGCCTCAGCCACCTGAGTAGCTGGGATTACA-GCGTGCACCAC--CACGCCAGGCTAATTTTT 811
Query 122 GTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------- 186
|||||.||||.|||||||||||||..||.||||||||||||||||||||||||||||||||||.|
Sbjct 812 GTATTCTTAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCC 885
Query 187 -------------------------------------------------------------------------- 186
Sbjct 886 CGCCTCGGCCTCTCAAAGTGCTGCGATTACAGGCGTGAGCCACTGCGCCCGGTAGTAAACGTGTTTCTTTAAGA 959
Query 187 -------------------------------------------------------------------------- 186
Sbjct 960 ATATACTAACAAACTGCAAGGTGATGCGGTCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGACTGTG 1033
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1034 TCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAATGGTGC 1107
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1108 CGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAGAAACT 1181
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1182 TGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGAAGGATGTGAAGAGCTGGCAAAAC 1255
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1256 TTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGAG 1329
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1330 CTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATT 1403
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1404 AAAGTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGAC 1477
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1478 AACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTACTCCTGAATCAAGATTGGAAACTCTTAG 1551
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1552 ACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTT 1625
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1626 TGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTTGAAAGATAACGAAAAG 1699
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1700 CAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTA 1773
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1774 CGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTG 1847
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1848 CTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAG 1921
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1922 CGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGA 1995
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1996 GAAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACAC 2069
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2070 CCAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCT 2143
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2144 CCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGA 2217
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2218 CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTTTTAACTCTTAC 2291
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2292 TTTGCATAGTAATATCCTTAAGATAGCTTAAAATTAAAATGTATGTCTTAAATGCTATAACTCATCATTTACCT 2365
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2366 ATAATAAAGGGTTGGTATTGAAAATGTTTAGTAAGATCATAGAACTATTGCATAAAACACTGATTATAAATACT 2439
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2440 GTCTACTTATGCAAAGTATTAATTCATAGATAAAAGGACTGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAA 2513
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2514 GCTTAGAAGTTAAAACTGTAATTTCAGACCCAATTGGAATACTTTAATATGATTTTAAACAGCATTTCCATTTT 2587
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2588 CCTTCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACT 2661
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2662 CTATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGC 2735
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2736 TTCATGTATAATCTGGGAATAATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGT 2809
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2810 ACAGTGTCAGCCATACATTTAGAGCCTCTTCTCTCTCTCCTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTT 2883
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2884 CTCCTGTCTCTCCTCCTCCCTGCTCCTTCTTCCCCTCCCTCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTT 2957
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2958 CACCTTTTTACTCCCCATCCCACTCCTTCTCCTCTATTTCCTTCTTTACTTTTTTAATATCCTACCTCTTCTTT 3031
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3032 ATCTAGAACATTATGAATTCAATATTTCACATACATTGTAGGACAAATTACTGTTACTCTGATCATGATATAGC 3105
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3106 AACATTTAAGTCAGTTTCCCCAAATATTCATTCAACAAATACTTATTGAGCAACTATTGAGTGCTAGCCCCCTC 3179
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3180 TCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACAGACTATGTCAGGTGGTGTTCAGA 3253
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3254 GCTGTGAAGGAGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAA 3327
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3328 CAGGCTTCCAGTGGAAGACTCTGCTAATGTTTAGCAGATAACCAAAATGCATCAGTTAGAAAAAAATATGATGA 3401
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3402 GAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGG 3475
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3476 AGAGGTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTG 3549
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3550 AAGTAGGACTGTGATTGGGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCTATT 3623
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3624 TATCTGCTACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTG 3697
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3698 CGGTAAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCAT 3771
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3772 CTGTCCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCA 3845
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3846 CGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAA 3919
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3920 CCTCTACCAACTTGGAAATCATGTACATTTGTCAGGACTGTATTTAATTTCCACATAGAGAGAAAGCAAAATTA 3993
Query 187 ---------------------------------------------------- 186
Sbjct 3994 TACTTTTGACCAAACTAATAGAATTATCCATTAAACAAACAAAACTGTGCCA 4045
