Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15487
Subject:
NR_136513.2
Aligned Length:
2561
Identities:
160
Gaps:
2375

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCCTGGGGGCCGCAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCTGAACCCCAAGCTGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCTCTAATAGTGACTGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGTCTTTCCTCAAACTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGGAAGGTTTGCCAGCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTAGTTCCTGAGACCAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAGATATAGATGGTGTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCTGAATTTTGTTGGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGGTGAGTCATTACTCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTTGAAAGGCTTTTGTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCATAAGGAATGTGGGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCATAAATGTAATAACTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGACCTTCACCCAGAAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTGCTTCAGCATTGGAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTGGAACTTGGGAAAAA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTATAGACAGAGATCAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAAGTTGTATGGGGAAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAGAAAAGGAAATGTTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATAAGTTGCATCTCTGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCATGCCTGCTCTAGTC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTTGTTGTAAATATATA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCACATATATCATGTTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAGACTACCTTTATATT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCTTTATTTTCTTTATT  1776

Query    1  ---------------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCC  35
                                                   .||||.||||.|.|||||.||||||||||||||||
Sbjct 1777  TTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGCTCACTGCAACCTCC  1850

Query   36  ATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACT  109
            ..||||||||||||||.|||||||.||.|||.|.||||.||||||||||||||||||||...||||||.|..|.
Sbjct 1851  GCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCACTTGCCACCATTCC  1924

Query  110  CAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTC  183
            ||.|||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.
Sbjct 1925  CAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTT  1998

Query  184  AAG-----------------------------------------------------------------------  186
            ..|                                                                       
Sbjct 1999  GTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGCCCGGCTGTTTTTTTAA  2072

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2073  GATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCTTATAGATAACACATAA  2146

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2147  TAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTAGGAAAGAATCTTTAGA  2220

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2221  AGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCTTATATATTTTATAGTA  2294

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2295  GGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTCTAGGTGTCCCTCTGCT  2368

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2369  GTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATGGACTGTGTTCTGTAAA  2442

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2443  AAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATAAAATGATTTCTTAATA  2516

Query  187  ---------------------------------------------  186
                                                         
Sbjct 2517  TTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA  2561

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